RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 NEMFO60524 1076 aa21.59■■□□□ 1.05
DDX55-211ENST00000544429 CYP2C9P11712 490 aa21.59■■□□□ 1.05
DDX55-211ENST00000544429 ATP4AP20648 1035 aa21.59■■□□□ 1.05
DDX55-211ENST00000544429 JAK3P52333 1124 aa21.59■■□□□ 1.05
DDX55-211ENST00000544429 CHMP4BP1P59074 171 aa21.59■■□□□ 1.05
DDX55-211ENST00000544429 SERINC5Q86VE9 423 aa21.59■■□□□ 1.05
DDX55-211ENST00000544429 SLFN12Q8IYM2 578 aa21.59■■□□□ 1.05
DDX55-211ENST00000544429 DHX38Q92620 1227 aaKnown RBP21.59■■□□□ 1.05
DDX55-211ENST00000544429 AZI2Q9H6S1 392 aa21.59■■□□□ 1.05
DDX55-211ENST00000544429 DISC1Q9NRI5 854 aa21.59■■□□□ 1.05
DDX55-211ENST00000544429 UMODL1Q5DID0 1318 aa21.58■■□□□ 1.05
DDX55-211ENST00000544429 NRCAMQ92823 1304 aa21.58■■□□□ 1.05
DDX55-211ENST00000544429 PITPNM1O00562 1244 aa21.58■■□□□ 1.05
DDX55-211ENST00000544429 PSAPP07602 524 aa21.58■■□□□ 1.05
DDX55-211ENST00000544429 RAG1P15918 1043 aa21.58■■□□□ 1.05
DDX55-211ENST00000544429 ZNF200P98182 395 aaPredicted RBP21.58■■□□□ 1.05
DDX55-211ENST00000544429 PLCB4Q15147 1175 aa21.58■■□□□ 1.05
DDX55-211ENST00000544429 TRIM71Q2Q1W2 868 aaKnown RBP21.58■■□□□ 1.05
DDX55-211ENST00000544429 MFSD5Q6N075 450 aa21.58■■□□□ 1.05
DDX55-211ENST00000544429 SWSAP1Q6NVH7 229 aa21.58■■□□□ 1.05
DDX55-211ENST00000544429 HSCBQ8IWL3 235 aa21.58■■□□□ 1.05
DDX55-211ENST00000544429 LMBR1Q8WVP7 490 aa21.58■■□□□ 1.05
DDX55-211ENST00000544429 BADQ92934 168 aa21.58■■□□□ 1.05
DDX55-211ENST00000544429 WNT8AQ9H1J5 351 aa21.58■■□□□ 1.05
DDX55-211ENST00000544429 TMEM60Q9H2L4 133 aa21.58■■□□□ 1.05
DDX55-211ENST00000544429 HIPK3Q9H422 1215 aa21.58■■□□□ 1.05
DDX55-211ENST00000544429 ZNF302Q9NR11 478 aa21.58■■□□□ 1.05
DDX55-211ENST00000544429 LAMA3Q16787 3333 aa21.57■■□□□ 1.04
DDX55-211ENST00000544429 C17orf102A2RUQ5 167 aa21.57■■□□□ 1.04
DDX55-211ENST00000544429 MBLAC1A4D2B0 266 aaPredicted RBP21.57■■□□□ 1.04
DDX55-211ENST00000544429 H3BQV1 296 aa21.57■■□□□ 1.04
DDX55-211ENST00000544429 PDCP20941 246 aa21.57■■□□□ 1.04
DDX55-211ENST00000544429 MARK3P27448 753 aa21.57■■□□□ 1.04
DDX55-211ENST00000544429 PTK7Q13308 1070 aa21.57■■□□□ 1.04
DDX55-211ENST00000544429 TTC38Q5R3I4 469 aa21.57■■□□□ 1.04
DDX55-211ENST00000544429 MARCH8Q5T0T0 291 aa21.57■■□□□ 1.04
DDX55-211ENST00000544429 FAM160B1Q5W0V3 765 aa21.57■■□□□ 1.04
DDX55-211ENST00000544429 C4orf32Q8N8J7 132 aa21.57■■□□□ 1.04
DDX55-211ENST00000544429 WNT8BQ93098 351 aa21.57■■□□□ 1.04
DDX55-211ENST00000544429 SETD4Q9NVD3 440 aa21.57■■□□□ 1.04
DDX55-211ENST00000544429 TCEAL9Q9UHQ7 104 aa21.57■■□□□ 1.04
DDX55-211ENST00000544429 EML1O00423 815 aa21.56■■□□□ 1.04
DDX55-211ENST00000544429 BACH1O14867 736 aa21.56■■□□□ 1.04
DDX55-211ENST00000544429 ZNF862O60290 1169 aa21.56■■□□□ 1.04
DDX55-211ENST00000544429 SYT1P21579 422 aa21.56■■□□□ 1.04
DDX55-211ENST00000544429 MDM2Q00987 491 aaPredicted RBP21.56■■□□□ 1.04
DDX55-211ENST00000544429 GNL2Q13823 731 aaKnown RBP21.56■■□□□ 1.04
DDX55-211ENST00000544429 CALCRLQ16602 461 aa21.56■■□□□ 1.04
DDX55-211ENST00000544429 CAGE1Q8TC20 777 aa21.56■■□□□ 1.04
DDX55-211ENST00000544429 ATP8B4Q8TF62 1192 aa21.56■■□□□ 1.04
DDX55-211ENST00000544429 VWCEQ96DN2 955 aa21.56■■□□□ 1.04
DDX55-211ENST00000544429 SCN5AQ14524 2016 aa21.56■■□□□ 1.04
DDX55-211ENST00000544429 ZBTB42B2RXF5 422 aa21.55■■□□□ 1.04
DDX55-211ENST00000544429 TREHO43280 583 aa21.55■■□□□ 1.04
DDX55-211ENST00000544429 CHMP2AO43633 222 aa21.55■■□□□ 1.04
DDX55-211ENST00000544429 GNAT1P11488 350 aa21.55■■□□□ 1.04
DDX55-211ENST00000544429 INSRRP14616 1297 aa21.55■■□□□ 1.04
DDX55-211ENST00000544429 CYP2C18P33260 490 aa21.55■■□□□ 1.04
DDX55-211ENST00000544429 MCM7P33993 719 aa21.55■■□□□ 1.04
DDX55-211ENST00000544429 PPFIA1Q13136 1202 aa21.55■■□□□ 1.04
DDX55-211ENST00000544429 GRIK4Q16099 956 aa21.55■■□□□ 1.04
DDX55-211ENST00000544429 UGCGQ16739 394 aa21.55■■□□□ 1.04
DDX55-211ENST00000544429 PDXDC2PQ6P474 469 aa21.55■■□□□ 1.04
DDX55-211ENST00000544429 CHRDL2Q6WN34 429 aa21.55■■□□□ 1.04
DDX55-211ENST00000544429 MIER3Q7Z3K6 550 aa21.55■■□□□ 1.04
DDX55-211ENST00000544429 ATP6V0A1Q93050 837 aa21.55■■□□□ 1.04
DDX55-211ENST00000544429 LBHD1Q9BQE6 289 aaPredicted RBP21.55■■□□□ 1.04
DDX55-211ENST00000544429 PPP1R12CQ9BZL4 782 aa21.55■■□□□ 1.04
DDX55-211ENST00000544429 GABBR1Q9UBS5 961 aa21.55■■□□□ 1.04
DDX55-211ENST00000544429 NOL7Q9UMY1 257 aaKnown RBP21.55■■□□□ 1.04
DDX55-211ENST00000544429 COLQQ9Y215 455 aaPredicted RBP21.55■■□□□ 1.04
DDX55-211ENST00000544429 POTEB3A0JP26 581 aa21.54■■□□□ 1.04
DDX55-211ENST00000544429 RRN3P2A6NIE6 340 aa21.54■■□□□ 1.04
DDX55-211ENST00000544429 HBP1O60381 514 aa21.54■■□□□ 1.04
DDX55-211ENST00000544429 STBD1O95210 358 aa21.54■■□□□ 1.04
DDX55-211ENST00000544429 BAG4O95429 457 aaKnown RBP21.54■■□□□ 1.04
DDX55-211ENST00000544429 NBR1Q14596 966 aa21.54■■□□□ 1.04
DDX55-211ENST00000544429 ZNF174Q15697 407 aa21.54■■□□□ 1.04
DDX55-211ENST00000544429 MCTP1Q6DN14 999 aa21.54■■□□□ 1.04
DDX55-211ENST00000544429 TRAF7Q6Q0C0 670 aa21.54■■□□□ 1.04
DDX55-211ENST00000544429 POTEBQ6S5H4 581 aa21.54■■□□□ 1.04
DDX55-211ENST00000544429 RPAINQ86UA6 219 aa21.54■■□□□ 1.04
DDX55-211ENST00000544429 PCDHA12Q9UN75 941 aa21.54■■□□□ 1.04
DDX55-211ENST00000544429 NOD1Q9Y239 953 aa21.54■■□□□ 1.04
DDX55-211ENST00000544429 SAMM50Q9Y512 469 aa21.54■■□□□ 1.04
DDX55-211ENST00000544429 PCDHB6Q9Y5E3 794 aa21.54■■□□□ 1.04
DDX55-211ENST00000544429 COL1A2P08123 1366 aa21.53■■□□□ 1.04
DDX55-211ENST00000544429 ATP2B1P20020 1258 aa21.53■■□□□ 1.04
DDX55-211ENST00000544429 EPHB4P54760 987 aa21.53■■□□□ 1.04
DDX55-211ENST00000544429 BFSP2Q13515 415 aa21.53■■□□□ 1.04
DDX55-211ENST00000544429 RILPL1Q5EBL4 403 aa21.53■■□□□ 1.04
DDX55-211ENST00000544429 BBXQ8WY36 941 aaPredicted RBP21.53■■□□□ 1.04
DDX55-211ENST00000544429 TNPO1Q92973 898 aaKnown RBP21.53■■□□□ 1.04
DDX55-211ENST00000544429 TTC12Q9H892 705 aaPredicted RBP21.53■■□□□ 1.04
DDX55-211ENST00000544429 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.53■■□□□ 1.04
DDX55-211ENST00000544429 TET1Q8NFU7 2136 aa21.53■■□□□ 1.04
DDX55-211ENST00000544429 TRIOBPQ9H2D6 2365 aa21.53■■□□□ 1.04
DDX55-211ENST00000544429 EVPLQ92817 2033 aa21.52■■□□□ 1.04
DDX55-211ENST00000544429 A0A1W2PPC1 479 aa21.52■■□□□ 1.04
DDX55-211ENST00000544429 IQCF3P0C7M6 154 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms