RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 LRRC53A6NM62 1247 aa5.74□□□□□ -1.49
ATPAF1-212ENST00000542495 RNF40O75150 1001 aa5.74□□□□□ -1.49
ATPAF1-212ENST00000542495 NOL4O94818 638 aa5.74□□□□□ -1.49
ATPAF1-212ENST00000542495 ZBTB7AO95365 584 aa5.74□□□□□ -1.49
ATPAF1-212ENST00000542495 IVLP07476 585 aa5.74□□□□□ -1.49
ATPAF1-212ENST00000542495 AKR1B1P15121 316 aa5.74□□□□□ -1.49
ATPAF1-212ENST00000542495 GCFC2P16383 781 aaKnown RBP5.74□□□□□ -1.49
ATPAF1-212ENST00000542495 TCP1P17987 556 aaKnown RBP5.74□□□□□ -1.49
ATPAF1-212ENST00000542495 MAGEA1P43355 309 aa5.74□□□□□ -1.49
ATPAF1-212ENST00000542495 SLC20A2Q08357 652 aa5.74□□□□□ -1.49
ATPAF1-212ENST00000542495 COASYQ13057 564 aa5.74□□□□□ -1.49
ATPAF1-212ENST00000542495 CCDC96Q2M329 555 aa5.74□□□□□ -1.49
ATPAF1-212ENST00000542495 RRAGAQ7L523 313 aa5.74□□□□□ -1.49
ATPAF1-212ENST00000542495 DYMQ7RTS9 669 aa5.74□□□□□ -1.49
ATPAF1-212ENST00000542495 MYOCDQ8IZQ8 938 aa5.74□□□□□ -1.49
ATPAF1-212ENST00000542495 RNF10Q8N5U6 811 aaKnown RBP5.74□□□□□ -1.49
ATPAF1-212ENST00000542495 SPATA4Q8NEY3 305 aa5.74□□□□□ -1.49
ATPAF1-212ENST00000542495 PRR7Q8TB68 274 aa5.74□□□□□ -1.49
ATPAF1-212ENST00000542495 TBC1D16Q8TBP0 767 aa5.74□□□□□ -1.49
ATPAF1-212ENST00000542495 SNX29Q8TEQ0 813 aa5.74□□□□□ -1.49
ATPAF1-212ENST00000542495 SMCR8Q8TEV9 937 aaPredicted RBP5.74□□□□□ -1.49
ATPAF1-212ENST00000542495 RPGRQ92834 1020 aaKnown RBP5.74□□□□□ -1.49
ATPAF1-212ENST00000542495 CAPZA3Q96KX2 299 aa5.74□□□□□ -1.49
ATPAF1-212ENST00000542495 CEP63Q96MT8 703 aa5.74□□□□□ -1.49
ATPAF1-212ENST00000542495 MBOAT7Q96N66 472 aa5.74□□□□□ -1.49
ATPAF1-212ENST00000542495 OSBPL9Q96SU4 736 aa5.74□□□□□ -1.49
ATPAF1-212ENST00000542495 TSG101Q99816 390 aa5.74□□□□□ -1.49
ATPAF1-212ENST00000542495 SELENOOQ9BVL4 669 aa5.74□□□□□ -1.49
ATPAF1-212ENST00000542495 TLR10Q9BXR5 811 aa5.74□□□□□ -1.49
ATPAF1-212ENST00000542495 NUCKS1Q9H1E3 243 aaKnown RBP5.74□□□□□ -1.49
ATPAF1-212ENST00000542495 MLXIPQ9HAP2 919 aa5.74□□□□□ -1.49
ATPAF1-212ENST00000542495 JADE2Q9NQC1 790 aa5.74□□□□□ -1.49
ATPAF1-212ENST00000542495 FAM207AQ9NSI2 230 aaPredicted RBP5.74□□□□□ -1.49
ATPAF1-212ENST00000542495 CWC15Q9P013 229 aaKnown RBP5.74□□□□□ -1.49
ATPAF1-212ENST00000542495 CEP72Q9P209 647 aa5.74□□□□□ -1.49
ATPAF1-212ENST00000542495 POLLQ9UGP5 575 aa5.74□□□□□ -1.49
ATPAF1-212ENST00000542495 SWAP70Q9UH65 585 aa5.74□□□□□ -1.49
ATPAF1-212ENST00000542495 SALL4Q9UJQ4 1053 aa5.74□□□□□ -1.49
ATPAF1-212ENST00000542495 FAM184BQ9ULE4 1060 aa5.74□□□□□ -1.49
ATPAF1-212ENST00000542495 HYOU1Q9Y4L1 999 aa5.74□□□□□ -1.49
ATPAF1-212ENST00000542495 FRMPD2Q68DX3 1309 aaPredicted RBP5.74□□□□□ -1.49
ATPAF1-212ENST00000542495 ARFGEF1Q9Y6D6 1849 aa5.74□□□□□ -1.49
ATPAF1-212ENST00000542495 UBR3Q6ZT12 1888 aa5.73□□□□□ -1.49
ATPAF1-212ENST00000542495 CYP3A7-CYP3A51PA0A087WV96 503 aa5.73□□□□□ -1.49
ATPAF1-212ENST00000542495 FRMD3A2A2Y4 597 aa5.73□□□□□ -1.49
ATPAF1-212ENST00000542495 CFAP99D6REC4 459 aa5.73□□□□□ -1.49
ATPAF1-212ENST00000542495 TLR2O60603 784 aa5.73□□□□□ -1.49
ATPAF1-212ENST00000542495 SHOX2O60902 331 aaPredicted RBP5.73□□□□□ -1.49
ATPAF1-212ENST00000542495 CLSTN1O94985 981 aa5.73□□□□□ -1.49
ATPAF1-212ENST00000542495 ATG7O95352 703 aa5.73□□□□□ -1.49
ATPAF1-212ENST00000542495 MOCS3O95396 460 aa5.73□□□□□ -1.49
ATPAF1-212ENST00000542495 GNA14O95837 355 aa5.73□□□□□ -1.49
ATPAF1-212ENST00000542495 TTLL1O95922 423 aa5.73□□□□□ -1.49
ATPAF1-212ENST00000542495 CYP3A7P24462 503 aa5.73□□□□□ -1.49
ATPAF1-212ENST00000542495 FKBP3Q00688 224 aaKnown RBP5.73□□□□□ -1.49
ATPAF1-212ENST00000542495 C2orf54Q08AI8 447 aa5.73□□□□□ -1.49
ATPAF1-212ENST00000542495 MTMR2Q13614 643 aa5.73□□□□□ -1.49
ATPAF1-212ENST00000542495 KLHDC7AQ5VTJ3 777 aa5.73□□□□□ -1.49
ATPAF1-212ENST00000542495 LRRC31Q6UY01 552 aa5.73□□□□□ -1.49
ATPAF1-212ENST00000542495 SND1Q7KZF4 910 aaKnown RBP eCLIP5.73□□□□□ -1.49
ATPAF1-212ENST00000542495 PACS2Q86VP3 889 aa5.73□□□□□ -1.49
ATPAF1-212ENST00000542495 TRIM59Q8IWR1 403 aa5.73□□□□□ -1.49
ATPAF1-212ENST00000542495 ADGRF4Q8IZF3 695 aa5.73□□□□□ -1.49
ATPAF1-212ENST00000542495 LRRC47Q8N1G4 583 aaKnown RBP5.73□□□□□ -1.49
ATPAF1-212ENST00000542495 GLIS3Q8NEA6 775 aa5.73□□□□□ -1.49
ATPAF1-212ENST00000542495 CAGE1Q8TC20 777 aa5.73□□□□□ -1.49
ATPAF1-212ENST00000542495 RBM17Q96I25 401 aaKnown RBP5.73□□□□□ -1.49
ATPAF1-212ENST00000542495 CDK5RAP3Q96JB5 506 aa5.73□□□□□ -1.49
ATPAF1-212ENST00000542495 CRAMP1Q96RY5 1269 aa5.73□□□□□ -1.49
ATPAF1-212ENST00000542495 NAP1L4Q99733 375 aaKnown RBP5.73□□□□□ -1.49
ATPAF1-212ENST00000542495 SH3GL2Q99962 352 aa5.73□□□□□ -1.49
ATPAF1-212ENST00000542495 MTFR1LQ9H019 292 aa5.73□□□□□ -1.49
ATPAF1-212ENST00000542495 TSPYL1Q9H0U9 437 aa5.73□□□□□ -1.49
ATPAF1-212ENST00000542495 KCTD10Q9H3F6 313 aa5.73□□□□□ -1.49
ATPAF1-212ENST00000542495 MMRN2Q9H8L6 949 aa5.73□□□□□ -1.49
ATPAF1-212ENST00000542495 FAM204AQ9H8W3 233 aa5.73□□□□□ -1.49
ATPAF1-212ENST00000542495 KCNMB3Q9NPA1 279 aa5.73□□□□□ -1.49
ATPAF1-212ENST00000542495 RNF14Q9UBS8 474 aa5.73□□□□□ -1.49
ATPAF1-212ENST00000542495 DDX25Q9UHL0 483 aaKnown RBP5.73□□□□□ -1.49
ATPAF1-212ENST00000542495 COL4A3BPQ9Y5P4 624 aa5.73□□□□□ -1.49
ATPAF1-212ENST00000542495 KDM3AQ9Y4C1 1321 aa5.73□□□□□ -1.49
ATPAF1-212ENST00000542495 MYH7BA7E2Y1 1941 aa5.73□□□□□ -1.49
ATPAF1-212ENST00000542495 ZBTB5O15062 677 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 AKR1B10O60218 316 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 SERPING1P05155 500 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 SLC10A3P09131 477 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 EPB41P11171 864 aaKnown RBP5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 GYS1P13807 737 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 SHMT1P34896 483 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 GGCXP38435 758 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 SLC1A4P43007 532 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 TNNT3P45378 269 aaPredicted RBP5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 TNNI2P48788 182 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 USP11P51784 963 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 MRPL12P52815 198 aaKnown RBP5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 GFPT1Q06210 699 aaPredicted RBP5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 LRRC41Q15345 812 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 NAB2Q15742 525 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 UBE2SQ16763 222 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 GLE1Q53GS7 698 aaKnown RBP5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms