RNA–Protein interactions for RNA: ENST00000541661.5

SCARB1-207, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 476 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-207ENST00000541661 PIEZO1Q92508 2521 aa15.04■□□□□ -0
SCARB1-207ENST00000541661 MAFGO15525 162 aa15.04■□□□□ -0
SCARB1-207ENST00000541661 MBTPS2O43462 519 aa15.04■□□□□ -0
SCARB1-207ENST00000541661 MMP1P03956 469 aa15.04■□□□□ -0
SCARB1-207ENST00000541661 ITGB5P18084 799 aa15.04■□□□□ -0
SCARB1-207ENST00000541661 IRS1P35568 1242 aa15.04■□□□□ -0
SCARB1-207ENST00000541661 DLX2Q07687 328 aaPredicted RBP15.04■□□□□ -0
SCARB1-207ENST00000541661 BTG3Q14201 252 aaPredicted RBP15.04■□□□□ -0
SCARB1-207ENST00000541661 GRIK4Q16099 956 aa15.04■□□□□ -0
SCARB1-207ENST00000541661 NAALADL2Q58DX5 795 aa15.04■□□□□ -0
SCARB1-207ENST00000541661 TSHZ1Q6ZSZ6 1077 aa15.04■□□□□ -0
SCARB1-207ENST00000541661 MAP4K1Q92918 833 aa15.04■□□□□ -0
SCARB1-207ENST00000541661 P2RX5Q93086 422 aa15.04■□□□□ -0
SCARB1-207ENST00000541661 UIMC1Q96RL1 719 aa15.04■□□□□ -0
SCARB1-207ENST00000541661 SMARCAD1Q9H4L7 1026 aa15.04■□□□□ -0
SCARB1-207ENST00000541661 PSTPIP2Q9H939 334 aa15.04■□□□□ -0
SCARB1-207ENST00000541661 SEC63Q9UGP8 760 aaKnown RBP15.04■□□□□ -0
SCARB1-207ENST00000541661 UBIAD1Q9Y5Z9 338 aa15.04■□□□□ -0
SCARB1-207ENST00000541661 TRIOO75962 3097 aa15.03■□□□□ -0
SCARB1-207ENST00000541661 KIAA1671Q9BY89 1806 aa15.03■□□□□ -0
SCARB1-207ENST00000541661 RRN3P2A6NIE6 340 aa15.03■□□□□ -0
SCARB1-207ENST00000541661 SGSM2O43147 1006 aa15.03■□□□□ -0
SCARB1-207ENST00000541661 GNAQP50148 359 aa15.03■□□□□ -0
SCARB1-207ENST00000541661 MRPS6P82932 125 aaKnown RBP15.03■□□□□ -0
SCARB1-207ENST00000541661 ADAM15Q13444 863 aa15.03■□□□□ -0
SCARB1-207ENST00000541661 CAMK1Q14012 370 aa15.03■□□□□ -0
SCARB1-207ENST00000541661 RTN4RL1Q86UN2 441 aaPredicted RBP15.03■□□□□ -0
SCARB1-207ENST00000541661 ALYREFQ86V81 257 aaKnown RBP15.03■□□□□ -0
SCARB1-207ENST00000541661 TMTC2Q8N394 836 aa15.03■□□□□ -0
SCARB1-207ENST00000541661 SRBD1Q8N5C6 995 aaKnown RBP15.03■□□□□ -0
SCARB1-207ENST00000541661 GLG1Q92896 1179 aa15.03■□□□□ -0
SCARB1-207ENST00000541661 POP1Q99575 1024 aaKnown RBP15.03■□□□□ -0
SCARB1-207ENST00000541661 MYL10Q9BUA6 226 aa15.03■□□□□ -0
SCARB1-207ENST00000541661 AGO3Q9H9G7 860 aaKnown RBP15.03■□□□□ -0
SCARB1-207ENST00000541661 PLAGL2Q9UPG8 496 aa15.03■□□□□ -0
SCARB1-207ENST00000541661 CDY2AQ9Y6F7 541 aa15.03■□□□□ -0
SCARB1-207ENST00000541661 LOXHD1Q8IVV2 1947 aa15.03■□□□□ -0
SCARB1-207ENST00000541661 WDFY4Q6ZS81 3184 aa15.03■□□□□ -0
SCARB1-207ENST00000541661 MARK3P27448 753 aa15.02■□□□□ -0
SCARB1-207ENST00000541661 SMAD4Q13485 552 aaKnown RBP15.02■□□□□ -0
SCARB1-207ENST00000541661 MTMR1Q13613 665 aa15.02■□□□□ -0
SCARB1-207ENST00000541661 CMTR2Q8IYT2 770 aaKnown RBP15.02■□□□□ -0
SCARB1-207ENST00000541661 LINC01599Q8WXQ3 324 aa15.02■□□□□ -0
SCARB1-207ENST00000541661 FTHL17Q9BXU8 183 aa15.02■□□□□ -0
SCARB1-207ENST00000541661 JADE2Q9NQC1 790 aa15.02■□□□□ -0
SCARB1-207ENST00000541661 TBX10O75333 385 aa15.01□□□□□ -0.01
SCARB1-207ENST00000541661 PLEKHA8P1O95397 391 aa15.01□□□□□ -0.01
SCARB1-207ENST00000541661 EYA4O95677 639 aa15.01□□□□□ -0.01
SCARB1-207ENST00000541661 INSRRP14616 1297 aa15.01□□□□□ -0.01
SCARB1-207ENST00000541661 CD52P31358 61 aa15.01□□□□□ -0.01
SCARB1-207ENST00000541661 GTF2F1P35269 517 aaKnown RBP eCLIP15.01□□□□□ -0.016e-7■■■■□ 21.5
SCARB1-207ENST00000541661 HERC4Q5GLZ8 1057 aaPredicted RBP15.01□□□□□ -0.01
SCARB1-207ENST00000541661 IER5Q5VY09 327 aa15.01□□□□□ -0.01
SCARB1-207ENST00000541661 CASC1Q6TDU7 716 aa15.01□□□□□ -0.01
SCARB1-207ENST00000541661 FAM43BQ6ZT52 329 aaPredicted RBP15.01□□□□□ -0.01
SCARB1-207ENST00000541661 NPAS4Q8IUM7 802 aa15.01□□□□□ -0.01
SCARB1-207ENST00000541661 TNPO1Q92973 898 aaKnown RBP15.01□□□□□ -0.01
SCARB1-207ENST00000541661 MSLNLQ96KJ4 702 aa15.01□□□□□ -0.01
SCARB1-207ENST00000541661 PCYT2Q99447 389 aa15.01□□□□□ -0.01
SCARB1-207ENST00000541661 ALG13Q9NP73 1137 aaKnown RBP15.01□□□□□ -0.01
SCARB1-207ENST00000541661 CD207Q9UJ71 328 aa15.01□□□□□ -0.01
SCARB1-207ENST00000541661 MRPL42Q9Y6G3 142 aaKnown RBP15.01□□□□□ -0.01
SCARB1-207ENST00000541661 LINC01565O15544 149 aa15□□□□□ -0.01
SCARB1-207ENST00000541661 PRC1O43663 620 aa15□□□□□ -0.01
SCARB1-207ENST00000541661 ITGB1P05556 798 aa15□□□□□ -0.01
SCARB1-207ENST00000541661 CALM1P0DP23 149 aa15□□□□□ -0.01
SCARB1-207ENST00000541661 CALM2P0DP24 149 aa15□□□□□ -0.01
SCARB1-207ENST00000541661 CALM3P0DP25 149 aa15□□□□□ -0.01
SCARB1-207ENST00000541661 DNAJB1P25685 340 aa15□□□□□ -0.01
SCARB1-207ENST00000541661 LIFRP42702 1097 aa15□□□□□ -0.01
SCARB1-207ENST00000541661 IGBP1P78318 339 aa15□□□□□ -0.01
SCARB1-207ENST00000541661 NHLH1Q02575 133 aa15□□□□□ -0.01
SCARB1-207ENST00000541661 CLUL1Q15846 466 aa15□□□□□ -0.01
SCARB1-207ENST00000541661 HFE2Q6ZVN8 426 aa15□□□□□ -0.01
SCARB1-207ENST00000541661 SPPL3Q8TCT6 385 aa15□□□□□ -0.01
SCARB1-207ENST00000541661 TMEM87BQ96K49 555 aa15□□□□□ -0.01
SCARB1-207ENST00000541661 FBXL18Q96ME1 805 aa15□□□□□ -0.01
SCARB1-207ENST00000541661 IGFLR1Q9H665 355 aa15□□□□□ -0.01
SCARB1-207ENST00000541661 PADI3Q9ULW8 664 aa15□□□□□ -0.01
SCARB1-207ENST00000541661 PCDHA6Q9UN73 950 aa15□□□□□ -0.01
SCARB1-207ENST00000541661 PCDHA8Q9Y5H6 950 aa15□□□□□ -0.01
SCARB1-207ENST00000541661 PCDHA2Q9Y5H9 948 aa15□□□□□ -0.01
SCARB1-207ENST00000541661 RBM8AQ9Y5S9 174 aaKnown RBP15□□□□□ -0.01
SCARB1-207ENST00000541661 ZNF318Q5VUA4 2279 aa15□□□□□ -0.01
SCARB1-207ENST00000541661 IGSF9BQ9UPX0 1349 aa14.99□□□□□ -0.01
SCARB1-207ENST00000541661 KDM3AQ9Y4C1 1321 aa14.99□□□□□ -0.01
SCARB1-207ENST00000541661 CCDC69A6NI79 296 aa14.99□□□□□ -0.01
SCARB1-207ENST00000541661 SPDYE3A6NKU9 549 aa14.99□□□□□ -0.01
SCARB1-207ENST00000541661 SH2B2O14492 632 aaPredicted RBP14.99□□□□□ -0.01
SCARB1-207ENST00000541661 STAG3L1P0CL83 205 aa14.99□□□□□ -0.01
SCARB1-207ENST00000541661 MCM5P33992 734 aa14.99□□□□□ -0.01
SCARB1-207ENST00000541661 MRE11P49959 708 aa14.99□□□□□ -0.01
SCARB1-207ENST00000541661 UBE2SQ16763 222 aa14.99□□□□□ -0.01
SCARB1-207ENST00000541661 PLPPR4Q7Z2D5 763 aa14.99□□□□□ -0.01
SCARB1-207ENST00000541661 RNF135Q8IUD6 432 aa14.99□□□□□ -0.01
SCARB1-207ENST00000541661 TEX2Q8IWB9 1127 aa14.99□□□□□ -0.01
SCARB1-207ENST00000541661 CMTR1Q8N1G2 835 aaKnown RBP14.99□□□□□ -0.01
SCARB1-207ENST00000541661 NME8Q8N427 588 aa14.99□□□□□ -0.01
SCARB1-207ENST00000541661 EFHBQ8N7U6 833 aa14.99□□□□□ -0.01
SCARB1-207ENST00000541661 PPP2R3CQ969Q6 453 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms