RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 KIAA1217Q5T5P2 1943 aa6.08□□□□□ -1.44
HMGB1P40-201ENST00000525121 VPS37CA5D8V6 355 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P40-201ENST00000525121 TRIM43BA6NCK2 446 aa6.08□□□□□ -1.44
HMGB1P40-201ENST00000525121 M0QZ92 97 aa6.08□□□□□ -1.44
HMGB1P40-201ENST00000525121 SLC37A4O43826 429 aa6.08□□□□□ -1.44
HMGB1P40-201ENST00000525121 HBP1O60381 514 aa6.08□□□□□ -1.44
HMGB1P40-201ENST00000525121 CAND2O75155 1236 aa6.08□□□□□ -1.44
HMGB1P40-201ENST00000525121 PSMD10O75832 226 aa6.08□□□□□ -1.44
HMGB1P40-201ENST00000525121 CCNE2O96020 404 aa6.08□□□□□ -1.44
HMGB1P40-201ENST00000525121 PFKMP08237 780 aa6.08□□□□□ -1.44
HMGB1P40-201ENST00000525121 CYP2C9P11712 490 aa6.08□□□□□ -1.44
HMGB1P40-201ENST00000525121 ACTN1P12814 892 aa6.08□□□□□ -1.44
HMGB1P40-201ENST00000525121 PDIA4P13667 645 aaKnown RBP6.08□□□□□ -1.44
HMGB1P40-201ENST00000525121 SELPP16109 830 aa6.08□□□□□ -1.44
HMGB1P40-201ENST00000525121 CYP2C18P33260 490 aa6.08□□□□□ -1.44
HMGB1P40-201ENST00000525121 MCM7P33993 719 aa6.08□□□□□ -1.44
HMGB1P40-201ENST00000525121 BMP8BP34820 402 aa6.08□□□□□ -1.44
HMGB1P40-201ENST00000525121 RFC2P35250 354 aa6.08□□□□□ -1.44
HMGB1P40-201ENST00000525121 IGBP1P78318 339 aa6.08□□□□□ -1.44
HMGB1P40-201ENST00000525121 CUL4AQ13619 759 aa6.08□□□□□ -1.44
HMGB1P40-201ENST00000525121 BECN1Q14457 450 aa6.08□□□□□ -1.44
HMGB1P40-201ENST00000525121 GRIK4Q16099 956 aa6.08□□□□□ -1.44
HMGB1P40-201ENST00000525121 RILPL1Q5EBL4 403 aa6.08□□□□□ -1.44
HMGB1P40-201ENST00000525121 TTC38Q5R3I4 469 aa6.08□□□□□ -1.44
HMGB1P40-201ENST00000525121 NCAPH2Q6IBW4 605 aa6.08□□□□□ -1.44
HMGB1P40-201ENST00000525121 MFSD5Q6N075 450 aa6.08□□□□□ -1.44
HMGB1P40-201ENST00000525121 SWSAP1Q6NVH7 229 aa6.08□□□□□ -1.44
HMGB1P40-201ENST00000525121 TAF2Q6P1X5 1199 aa6.08□□□□□ -1.44
HMGB1P40-201ENST00000525121 PSRC1Q6PGN9 363 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P40-201ENST00000525121 ABHD15Q6UXT9 468 aa6.08□□□□□ -1.44
HMGB1P40-201ENST00000525121 LRRC8DQ7L1W4 858 aa6.08□□□□□ -1.44
HMGB1P40-201ENST00000525121 BRAPQ7Z569 592 aa6.08□□□□□ -1.44
HMGB1P40-201ENST00000525121 SH3RF1Q7Z6J0 888 aa6.08□□□□□ -1.44
HMGB1P40-201ENST00000525121 POTEDQ86YR6 584 aa6.08□□□□□ -1.44
HMGB1P40-201ENST00000525121 CCDC60Q8IWA6 550 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P40-201ENST00000525121 RPUSD2Q8IZ73 545 aaKnown RBP6.08□□□□□ -1.44
HMGB1P40-201ENST00000525121 ERMNQ8TAM6 284 aa6.08□□□□□ -1.44
HMGB1P40-201ENST00000525121 ETNPPLQ8TBG4 499 aa6.08□□□□□ -1.44
HMGB1P40-201ENST00000525121 ATP8B4Q8TF62 1192 aa6.08□□□□□ -1.44
HMGB1P40-201ENST00000525121 PPP1R13LQ8WUF5 828 aa6.08□□□□□ -1.44
HMGB1P40-201ENST00000525121 LMBR1Q8WVP7 490 aa6.08□□□□□ -1.44
HMGB1P40-201ENST00000525121 BBXQ8WY36 941 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P40-201ENST00000525121 TNFRSF25Q93038 417 aa6.08□□□□□ -1.44
HMGB1P40-201ENST00000525121 TRIM43Q96BQ3 446 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P40-201ENST00000525121 CCDC43Q96MW1 224 aaKnown RBP6.08□□□□□ -1.44
HMGB1P40-201ENST00000525121 NOC4LQ9BVI4 516 aaKnown RBP6.08□□□□□ -1.44
HMGB1P40-201ENST00000525121 UNC45AQ9H3U1 944 aa6.08□□□□□ -1.44
HMGB1P40-201ENST00000525121 KCNMB3Q9NPA1 279 aa6.08□□□□□ -1.44
HMGB1P40-201ENST00000525121 NRBP2Q9NSY0 501 aa6.08□□□□□ -1.44
HMGB1P40-201ENST00000525121 SETD4Q9NVD3 440 aa6.08□□□□□ -1.44
HMGB1P40-201ENST00000525121 GABBR1Q9UBS5 961 aa6.08□□□□□ -1.44
HMGB1P40-201ENST00000525121 TUBE1Q9UJT0 475 aa6.08□□□□□ -1.44
HMGB1P40-201ENST00000525121 PCDHA12Q9UN75 941 aa6.08□□□□□ -1.44
HMGB1P40-201ENST00000525121 IGSF9BQ9UPX0 1349 aa6.07□□□□□ -1.44
HMGB1P40-201ENST00000525121 IGKV6D-21A0A0A0MT36 114 aa6.07□□□□□ -1.44
HMGB1P40-201ENST00000525121 FAM205CA6NFA0 338 aa6.07□□□□□ -1.44
HMGB1P40-201ENST00000525121 LAD1O00515 517 aa6.07□□□□□ -1.44
HMGB1P40-201ENST00000525121 DHX15O43143 795 aaKnown RBP6.07□□□□□ -1.44
HMGB1P40-201ENST00000525121 ATG7O95352 703 aa6.07□□□□□ -1.44
HMGB1P40-201ENST00000525121 BMP15O95972 392 aa6.07□□□□□ -1.44
HMGB1P40-201ENST00000525121 OATP04181 439 aa6.07□□□□□ -1.44
HMGB1P40-201ENST00000525121 OR52Z1P0C646 297 aa6.07□□□□□ -1.44
HMGB1P40-201ENST00000525121 INSRRP14616 1297 aa6.07□□□□□ -1.44
HMGB1P40-201ENST00000525121 CSF2RAP15509 400 aa6.07□□□□□ -1.44
HMGB1P40-201ENST00000525121 U2AF2P26368 475 aaKnown RBP eCLIP6.07□□□□□ -1.44
HMGB1P40-201ENST00000525121 THPOP40225 353 aa6.07□□□□□ -1.44
HMGB1P40-201ENST00000525121 TXKP42681 527 aa6.07□□□□□ -1.44
HMGB1P40-201ENST00000525121 CCL23P55773 120 aa6.07□□□□□ -1.44
HMGB1P40-201ENST00000525121 PSMC5P62195 406 aa6.07□□□□□ -1.44
HMGB1P40-201ENST00000525121 PRKCEQ02156 737 aa6.07□□□□□ -1.44
HMGB1P40-201ENST00000525121 PPP2R5CQ13362 524 aa6.07□□□□□ -1.44
HMGB1P40-201ENST00000525121 PLCB4Q15147 1175 aa6.07□□□□□ -1.44
HMGB1P40-201ENST00000525121 ZNF174Q15697 407 aa6.07□□□□□ -1.44
HMGB1P40-201ENST00000525121 EARS2Q5JPH6 523 aaKnown RBP6.07□□□□□ -1.44
HMGB1P40-201ENST00000525121 ZNF484Q5JVG2 852 aa6.07□□□□□ -1.44
HMGB1P40-201ENST00000525121 SERINC5Q86VE9 423 aa6.07□□□□□ -1.44
HMGB1P40-201ENST00000525121 TDHQ8IZJ6 230 aa6.07□□□□□ -1.44
HMGB1P40-201ENST00000525121 NEK9Q8TD19 979 aa6.07□□□□□ -1.44
HMGB1P40-201ENST00000525121 RNPC3Q96LT9 517 aaKnown RBP6.07□□□□□ -1.44
HMGB1P40-201ENST00000525121 MAP7D2Q96T17 732 aa6.07□□□□□ -1.44
HMGB1P40-201ENST00000525121 GDF15Q99988 308 aa6.07□□□□□ -1.44
HMGB1P40-201ENST00000525121 FTOQ9C0B1 505 aaKnown RBP eCLIP6.07□□□□□ -1.44
HMGB1P40-201ENST00000525121 RNPEPQ9H4A4 650 aa6.07□□□□□ -1.44
HMGB1P40-201ENST00000525121 TTC12Q9H892 705 aaPredicted RBP6.07□□□□□ -1.44
HMGB1P40-201ENST00000525121 IL23AQ9NPF7 189 aa6.07□□□□□ -1.44
HMGB1P40-201ENST00000525121 FOXD4L1Q9NU39 408 aa6.07□□□□□ -1.44
HMGB1P40-201ENST00000525121 SEPT9Q9UHD8 586 aaPredicted RBP6.07□□□□□ -1.44
HMGB1P40-201ENST00000525121 COLQQ9Y215 455 aaPredicted RBP6.07□□□□□ -1.44
HMGB1P40-201ENST00000525121 STK24Q9Y6E0 443 aa6.07□□□□□ -1.44
HMGB1P40-201ENST00000525121 ZBBXA8MT70 800 aa6.06□□□□□ -1.44
HMGB1P40-201ENST00000525121 RSPH10B2B2RC85 870 aa6.06□□□□□ -1.44
HMGB1P40-201ENST00000525121 MAGEB2O15479 319 aa6.06□□□□□ -1.44
HMGB1P40-201ENST00000525121 TREHO43280 583 aa6.06□□□□□ -1.44
HMGB1P40-201ENST00000525121 FGBP02675 491 aa6.06□□□□□ -1.44
HMGB1P40-201ENST00000525121 P4HBP07237 508 aaKnown RBP6.06□□□□□ -1.44
HMGB1P40-201ENST00000525121 CTSHP09668 335 aa6.06□□□□□ -1.44
HMGB1P40-201ENST00000525121 IQCF3P0C7M6 154 aa6.06□□□□□ -1.44
HMGB1P40-201ENST00000525121 RSPH10BP0C881 870 aa6.06□□□□□ -1.44
HMGB1P40-201ENST00000525121 CKBP12277 381 aa6.06□□□□□ -1.44
HMGB1P40-201ENST00000525121 TMOD1P28289 359 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms