RNA–Protein interactions for RNA: ENST00000524204.1

NPM1-212, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-212ENST00000524204 CT47A1Q5JQC4 288 aaPredicted RBP6.39□□□□□ -1.39
NPM1-212ENST00000524204 LRCH2Q5VUJ6 765 aa6.39□□□□□ -1.39
NPM1-212ENST00000524204 PCSK4Q6UW60 755 aa6.39□□□□□ -1.39
NPM1-212ENST00000524204 RUFY4Q6ZNE9 571 aa6.39□□□□□ -1.39
NPM1-212ENST00000524204 CHAC2Q8WUX2 184 aa6.39□□□□□ -1.39
NPM1-212ENST00000524204 CLIC6Q96NY7 704 aa6.39□□□□□ -1.39
NPM1-212ENST00000524204 TERF2IPQ9NYB0 399 aa6.39□□□□□ -1.39
NPM1-212ENST00000524204 FTSJ1Q9UET6 329 aa6.39□□□□□ -1.39
NPM1-212ENST00000524204 ADAM29Q9UKF5 820 aa6.39□□□□□ -1.39
NPM1-212ENST00000524204 ZNF214Q9UL59 606 aaPredicted RBP6.39□□□□□ -1.39
NPM1-212ENST00000524204 ZNRF3Q9ULT6 936 aa6.39□□□□□ -1.39
NPM1-212ENST00000524204 THRAP3Q9Y2W1 955 aaKnown RBP6.39□□□□□ -1.39
NPM1-212ENST00000524204 C22orf46C9J442 243 aa6.38□□□□□ -1.39
NPM1-212ENST00000524204 PPFIA2O75334 1257 aa6.38□□□□□ -1.39
NPM1-212ENST00000524204 ASMTLO95671 621 aa6.38□□□□□ -1.39
NPM1-212ENST00000524204 COL6A1P12109 1028 aa6.38□□□□□ -1.39
NPM1-212ENST00000524204 ATXN1P54253 815 aaKnown RBP6.38□□□□□ -1.39
NPM1-212ENST00000524204 EPHB1P54762 984 aa6.38□□□□□ -1.39
NPM1-212ENST00000524204 EVA1CP58658 441 aa6.38□□□□□ -1.39
NPM1-212ENST00000524204 FXNQ16595 210 aa6.38□□□□□ -1.39
NPM1-212ENST00000524204 TKFCQ3LXA3 575 aa6.38□□□□□ -1.39
NPM1-212ENST00000524204 C4orf46Q504U0 113 aa6.38□□□□□ -1.39
NPM1-212ENST00000524204 BRDTQ58F21 947 aaPredicted RBP6.38□□□□□ -1.39
NPM1-212ENST00000524204 CELF2-AS1Q8N7Q2 184 aa6.38□□□□□ -1.39
NPM1-212ENST00000524204 NUDT10Q8NFP7 164 aa6.38□□□□□ -1.39
NPM1-212ENST00000524204 EDAQ92838 391 aa6.38□□□□□ -1.39
NPM1-212ENST00000524204 NUDT11Q96G61 164 aa6.38□□□□□ -1.39
NPM1-212ENST00000524204 SHDQ96IW2 340 aa6.38□□□□□ -1.39
NPM1-212ENST00000524204 BARX1Q9HBU1 254 aaPredicted RBP6.38□□□□□ -1.39
NPM1-212ENST00000524204 NGRNQ9NPE2 291 aaKnown RBP6.38□□□□□ -1.39
NPM1-212ENST00000524204 BTG4Q9NY30 223 aa6.38□□□□□ -1.39
NPM1-212ENST00000524204 CLEC1BQ9P126 229 aa6.38□□□□□ -1.39
NPM1-212ENST00000524204 WHRNQ9P202 907 aa6.38□□□□□ -1.39
NPM1-212ENST00000524204 KDM2BQ8NHM5 1336 aa6.37□□□□□ -1.39
NPM1-212ENST00000524204 PAX3P23760 479 aa6.37□□□□□ -1.39
NPM1-212ENST00000524204 SLC6A11P48066 632 aa6.37□□□□□ -1.39
NPM1-212ENST00000524204 BRD3Q15059 726 aa6.37□□□□□ -1.39
NPM1-212ENST00000524204 PPP2R5AQ15172 486 aa6.37□□□□□ -1.39
NPM1-212ENST00000524204 MAP9Q49MG5 647 aa6.37□□□□□ -1.39
NPM1-212ENST00000524204 FNDC7Q5VTL7 733 aa6.37□□□□□ -1.39
NPM1-212ENST00000524204 FBXW10Q5XX13 1052 aa6.37□□□□□ -1.39
NPM1-212ENST00000524204 PPP4R4Q6NUP7 873 aa6.37□□□□□ -1.39
NPM1-212ENST00000524204 TRMT10BQ6PF06 316 aaKnown RBP6.37□□□□□ -1.39
NPM1-212ENST00000524204 CCDC81Q6ZN84 652 aa6.37□□□□□ -1.39
NPM1-212ENST00000524204 Q6ZSN1 163 aa6.37□□□□□ -1.39
NPM1-212ENST00000524204 OR6P1Q8NGX9 317 aa6.37□□□□□ -1.39
NPM1-212ENST00000524204 LARP4BQ92615 738 aaKnown RBP6.37□□□□□ -1.39
NPM1-212ENST00000524204 LRRC37BQ96QE4 947 aa6.37□□□□□ -1.39
NPM1-212ENST00000524204 FERD3LQ96RJ6 166 aa6.37□□□□□ -1.39
NPM1-212ENST00000524204 SEC61A2Q9H9S3 476 aa6.37□□□□□ -1.39
NPM1-212ENST00000524204 MCM8Q9UJA3 840 aa6.37□□□□□ -1.39
NPM1-212ENST00000524204 PPFIA4O75335 1185 aa6.36□□□□□ -1.39
NPM1-212ENST00000524204 SOX5P35711 763 aa6.36□□□□□ -1.39
NPM1-212ENST00000524204 GNALP38405 381 aa6.36□□□□□ -1.39
NPM1-212ENST00000524204 CDKN1CP49918 316 aaPredicted RBP6.36□□□□□ -1.39
NPM1-212ENST00000524204 INF2Q27J81 1249 aa6.36□□□□□ -1.39
NPM1-212ENST00000524204 DALRD3Q5D0E6 543 aaKnown RBP6.36□□□□□ -1.39
NPM1-212ENST00000524204 LARP1BQ659C4 914 aaKnown RBP6.36□□□□□ -1.39
NPM1-212ENST00000524204 PNISRQ8TF01 805 aaKnown RBP6.36□□□□□ -1.39
NPM1-212ENST00000524204 TSR2Q969E8 191 aaKnown RBP6.36□□□□□ -1.39
NPM1-212ENST00000524204 LMF1Q96S06 567 aa6.36□□□□□ -1.39
NPM1-212ENST00000524204 APBA2Q99767 749 aa6.36□□□□□ -1.39
NPM1-212ENST00000524204 HAUS7Q99871 368 aa6.36□□□□□ -1.39
NPM1-212ENST00000524204 KLHL25Q9H0H3 589 aa6.36□□□□□ -1.39
NPM1-212ENST00000524204 GPRC5CQ9NQ84 441 aa6.36□□□□□ -1.39
NPM1-212ENST00000524204 CGGBP1Q9UFW8 167 aaPredicted RBP6.36□□□□□ -1.39
NPM1-212ENST00000524204 TRBV23OR9-2A0A075B6M9 112 aa6.35□□□□□ -1.39
NPM1-212ENST00000524204 ALDH1L1O75891 902 aa6.35□□□□□ -1.39
NPM1-212ENST00000524204 PLS3P13797 630 aa6.35□□□□□ -1.39
NPM1-212ENST00000524204 FPR2P25090 351 aa6.35□□□□□ -1.39
NPM1-212ENST00000524204 AMPD2Q01433 879 aa6.35□□□□□ -1.39
NPM1-212ENST00000524204 LONRF3Q496Y0 759 aa6.35□□□□□ -1.39
NPM1-212ENST00000524204 TEPPQ6URK8 271 aa6.35□□□□□ -1.39
NPM1-212ENST00000524204 TAX1BP1Q86VP1 789 aa6.35□□□□□ -1.39
NPM1-212ENST00000524204 ARRDC4Q8NCT1 418 aa6.35□□□□□ -1.39
NPM1-212ENST00000524204 IL17DQ8TAD2 202 aa6.35□□□□□ -1.39
NPM1-212ENST00000524204 FGD4Q96M96 766 aa6.35□□□□□ -1.39
NPM1-212ENST00000524204 TM9SF2Q99805 663 aa6.35□□□□□ -1.39
NPM1-212ENST00000524204 YIPF4Q9BSR8 244 aa6.35□□□□□ -1.39
NPM1-212ENST00000524204 RBPJLQ9UBG7 517 aa6.35□□□□□ -1.39
NPM1-212ENST00000524204 PPT2Q9UMR5 302 aa6.35□□□□□ -1.39
NPM1-212ENST00000524204 CD2APQ9Y5K6 639 aa6.35□□□□□ -1.39
NPM1-212ENST00000524204 DMRT1Q9Y5R6 373 aa6.35□□□□□ -1.39
NPM1-212ENST00000524204 PTCH2Q9Y6C5 1203 aa6.35□□□□□ -1.39
NPM1-212ENST00000524204 TSPAN6O43657 245 aa6.34□□□□□ -1.39
NPM1-212ENST00000524204 WDHD1O75717 1129 aaPredicted RBP6.34□□□□□ -1.39
NPM1-212ENST00000524204 KLHL18O94889 574 aa6.34□□□□□ -1.39
NPM1-212ENST00000524204 LRG1P02750 347 aa6.34□□□□□ -1.39
NPM1-212ENST00000524204 MYL1P05976 194 aa6.34□□□□□ -1.39
NPM1-212ENST00000524204 MYCLP1P12525 358 aaPredicted RBP6.34□□□□□ -1.39
NPM1-212ENST00000524204 COMTP21964 271 aa6.34□□□□□ -1.39
NPM1-212ENST00000524204 GIPRP48546 466 aa6.34□□□□□ -1.39
NPM1-212ENST00000524204 KRTAP10-9P60411 292 aa6.34□□□□□ -1.39
NPM1-212ENST00000524204 SSRP1Q08945 709 aaKnown RBP6.34□□□□□ -1.39
NPM1-212ENST00000524204 HLTFQ14527 1009 aaKnown RBP eCLIP6.34□□□□□ -1.39
NPM1-212ENST00000524204 ZRSR2Q15696 482 aaKnown RBP6.34□□□□□ -1.39
NPM1-212ENST00000524204 NFE2Q16621 373 aaPredicted RBP6.34□□□□□ -1.39
NPM1-212ENST00000524204 ZNF627Q7L945 461 aa6.34□□□□□ -1.39
NPM1-212ENST00000524204 DDX42Q86XP3 938 aaKnown RBP eCLIP6.34□□□□□ -1.39
NPM1-212ENST00000524204 FUKQ8N0W3 1084 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms