RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 IFT140Q96RY7 1462 aa5.93□□□□□ -1.46
HMGB3P13-201ENST00000511263 PYGMP11217 842 aa5.92□□□□□ -1.46
HMGB3P13-201ENST00000511263 ANP32AP39687 249 aaKnown RBP5.92□□□□□ -1.46
HMGB3P13-201ENST00000511263 LACTBP83111 547 aaPredicted RBP5.92□□□□□ -1.46
HMGB3P13-201ENST00000511263 SQSTM1Q13501 440 aa5.92□□□□□ -1.46
HMGB3P13-201ENST00000511263 PAN2Q504Q3 1202 aaKnown RBP5.92□□□□□ -1.46
HMGB3P13-201ENST00000511263 KRTAP5-3Q6L8H2 238 aa5.92□□□□□ -1.46
HMGB3P13-201ENST00000511263 TEPPQ6URK8 271 aa5.92□□□□□ -1.46
HMGB3P13-201ENST00000511263 SAPCD2Q86UD0 394 aa5.92□□□□□ -1.46
HMGB3P13-201ENST00000511263 FAM124AQ86V42 546 aa5.92□□□□□ -1.46
HMGB3P13-201ENST00000511263 LINC00482Q8N8I6 264 aa5.92□□□□□ -1.46
HMGB3P13-201ENST00000511263 FNIP1Q8TF40 1166 aa5.92□□□□□ -1.46
HMGB3P13-201ENST00000511263 RNPC3Q96LT9 517 aaKnown RBP5.92□□□□□ -1.46
HMGB3P13-201ENST00000511263 FEZ1Q99689 392 aa5.92□□□□□ -1.46
HMGB3P13-201ENST00000511263 C11orf84Q9BUA3 381 aaPredicted RBP5.92□□□□□ -1.46
HMGB3P13-201ENST00000511263 TMX1Q9H3N1 280 aa5.92□□□□□ -1.46
HMGB3P13-201ENST00000511263 BCAS3Q9H6U6 928 aa5.92□□□□□ -1.46
HMGB3P13-201ENST00000511263 SRPK3Q9UPE1 567 aa5.92□□□□□ -1.46
HMGB3P13-201ENST00000511263 NOP58Q9Y2X3 529 aaKnown RBP5.92□□□□□ -1.46
HMGB3P13-201ENST00000511263 CARMIL1Q5VZK9 1371 aa5.92□□□□□ -1.46
HMGB3P13-201ENST00000511263 CUX1P39880 1505 aa5.91□□□□□ -1.46
HMGB3P13-201ENST00000511263 ABCA10Q8WWZ4 1543 aa5.91□□□□□ -1.46
HMGB3P13-201ENST00000511263 TCRBV16S1A1N1A0A5B0 115 aa5.91□□□□□ -1.46
HMGB3P13-201ENST00000511263 ESYT3A0FGR9 886 aa5.91□□□□□ -1.46
HMGB3P13-201ENST00000511263 SH3D21A4FU49 640 aa5.91□□□□□ -1.46
HMGB3P13-201ENST00000511263 CLASP2O75122 1294 aaKnown RBP5.91□□□□□ -1.46
HMGB3P13-201ENST00000511263 RAPGEF3O95398 923 aa5.91□□□□□ -1.46
HMGB3P13-201ENST00000511263 C8BP07358 591 aa5.91□□□□□ -1.46
HMGB3P13-201ENST00000511263 HSP90AA1P07900 732 aaKnown RBP5.91□□□□□ -1.46
HMGB3P13-201ENST00000511263 CELA3BP08861 270 aa5.91□□□□□ -1.46
HMGB3P13-201ENST00000511263 PDE6AP16499 860 aa5.91□□□□□ -1.46
HMGB3P13-201ENST00000511263 FAHP16930 419 aa5.91□□□□□ -1.46
HMGB3P13-201ENST00000511263 MC3RP41968 323 aa5.91□□□□□ -1.46
HMGB3P13-201ENST00000511263 HTRA3P83110 453 aa5.91□□□□□ -1.46
HMGB3P13-201ENST00000511263 BTBD8Q5XKL5 378 aa5.91□□□□□ -1.46
HMGB3P13-201ENST00000511263 AHI1Q8N157 1196 aa5.91□□□□□ -1.46
HMGB3P13-201ENST00000511263 C2orf69Q8N8R5 385 aa5.91□□□□□ -1.46
HMGB3P13-201ENST00000511263 WDR48Q8TAF3 677 aa5.91□□□□□ -1.46
HMGB3P13-201ENST00000511263 SLC7A14Q8TBB6 771 aa5.91□□□□□ -1.46
HMGB3P13-201ENST00000511263 DLL4Q9NR61 685 aa5.91□□□□□ -1.46
HMGB3P13-201ENST00000511263 FANCLQ9NW38 375 aa5.91□□□□□ -1.46
HMGB3P13-201ENST00000511263 DNMBPQ6XZF7 1577 aa5.91□□□□□ -1.46
HMGB3P13-201ENST00000511263 WASHC2CQ9Y4E1 1318 aa5.91□□□□□ -1.46
HMGB3P13-201ENST00000511263 URB2Q14146 1524 aaKnown RBP5.9□□□□□ -1.46
HMGB3P13-201ENST00000511263 SLC12A8A0AV02 714 aa5.9□□□□□ -1.46
HMGB3P13-201ENST00000511263 NKRFO15226 690 aaKnown RBP eCLIP5.9□□□□□ -1.46
HMGB3P13-201ENST00000511263 CHGBP05060 677 aa5.9□□□□□ -1.46
HMGB3P13-201ENST00000511263 KRT15P19012 456 aa5.9□□□□□ -1.46
HMGB3P13-201ENST00000511263 STAT5AP42229 794 aa5.9□□□□□ -1.46
HMGB3P13-201ENST00000511263 SARSP49591 514 aaKnown RBP5.9□□□□□ -1.46
HMGB3P13-201ENST00000511263 SETQ01105 290 aaPredicted RBP5.9□□□□□ -1.46
HMGB3P13-201ENST00000511263 DPP8Q6V1X1 898 aaPredicted RBP5.9□□□□□ -1.46
HMGB3P13-201ENST00000511263 TRIM39Q9HCM9 518 aa5.9□□□□□ -1.46
HMGB3P13-201ENST00000511263 LUC7LQ9NQ29 371 aaKnown RBP5.9□□□□□ -1.46
HMGB3P13-201ENST00000511263 RIC8BQ9NVN3 520 aa5.9□□□□□ -1.46
HMGB3P13-201ENST00000511263 TDRD9Q8NDG6 1382 aaKnown RBP5.9□□□□□ -1.47
HMGB3P13-201ENST00000511263 CUX2O14529 1486 aa5.9□□□□□ -1.47
HMGB3P13-201ENST00000511263 POLA1P09884 1462 aaPredicted RBP5.9□□□□□ -1.47
HMGB3P13-201ENST00000511263 TLDC2A0PJX2 215 aa5.89□□□□□ -1.47
HMGB3P13-201ENST00000511263 ENPP3O14638 875 aa5.89□□□□□ -1.47
HMGB3P13-201ENST00000511263 CLGNO14967 610 aa5.89□□□□□ -1.47
HMGB3P13-201ENST00000511263 FBXO21O94952 628 aa5.89□□□□□ -1.47
HMGB3P13-201ENST00000511263 RASGRP1O95267 797 aa5.89□□□□□ -1.47
HMGB3P13-201ENST00000511263 MCCP23508 829 aa5.89□□□□□ -1.47
HMGB3P13-201ENST00000511263 RPL13P26373 211 aaKnown RBP5.89□□□□□ -1.47
HMGB3P13-201ENST00000511263 KCNC1P48547 511 aa5.89□□□□□ -1.47
HMGB3P13-201ENST00000511263 ITGA1P56199 1179 aa5.89□□□□□ -1.47
HMGB3P13-201ENST00000511263 GRIN1Q05586 938 aa5.89□□□□□ -1.47
HMGB3P13-201ENST00000511263 KIAA2012Q0VF49 1180 aa5.89□□□□□ -1.47
HMGB3P13-201ENST00000511263 PABPC4Q13310 644 aaKnown RBP eCLIP5.89□□□□□ -1.47
HMGB3P13-201ENST00000511263 CR1LQ2VPA4 569 aa5.89□□□□□ -1.47
HMGB3P13-201ENST00000511263 ZCCHC8Q6NZY4 707 aaKnown RBP5.89□□□□□ -1.47
HMGB3P13-201ENST00000511263 HHIPL2Q6UWX4 724 aa5.89□□□□□ -1.47
HMGB3P13-201ENST00000511263 OSTM1Q86WC4 334 aa5.89□□□□□ -1.47
HMGB3P13-201ENST00000511263 GORASP1Q9BQQ3 440 aa5.89□□□□□ -1.47
HMGB3P13-201ENST00000511263 ARHGAP28Q9P2N2 729 aa5.89□□□□□ -1.47
HMGB3P13-201ENST00000511263 MRPL42Q9Y6G3 142 aaKnown RBP5.89□□□□□ -1.47
HMGB3P13-201ENST00000511263 TNIKQ9UKE5 1360 aa5.89□□□□□ -1.47
HMGB3P13-201ENST00000511263 FGD5Q6ZNL6 1462 aa5.89□□□□□ -1.47
HMGB3P13-201ENST00000511263 LRG1P02750 347 aa5.88□□□□□ -1.47
HMGB3P13-201ENST00000511263 PTPN1P18031 435 aaKnown RBP5.88□□□□□ -1.47
HMGB3P13-201ENST00000511263 THBS2P35442 1172 aa5.88□□□□□ -1.47
HMGB3P13-201ENST00000511263 HERVK_113P62684 666 aa5.88□□□□□ -1.47
HMGB3P13-201ENST00000511263 PRAMEF18Q5VWM3 479 aa5.88□□□□□ -1.47
HMGB3P13-201ENST00000511263 PPM1KQ8N3J5 372 aa5.88□□□□□ -1.47
HMGB3P13-201ENST00000511263 IGSF22Q8N9C0 903 aa5.88□□□□□ -1.47
HMGB3P13-201ENST00000511263 TP53I13Q8NBR0 393 aaPredicted RBP5.88□□□□□ -1.47
HMGB3P13-201ENST00000511263 CLEC4DQ8WXI8 215 aa5.88□□□□□ -1.47
HMGB3P13-201ENST00000511263 NINJ1Q92982 152 aa5.88□□□□□ -1.47
HMGB3P13-201ENST00000511263 E2F7Q96AV8 911 aa5.88□□□□□ -1.47
HMGB3P13-201ENST00000511263 WNK4Q96J92 1243 aa5.88□□□□□ -1.47
HMGB3P13-201ENST00000511263 BOCQ9BWV1 1114 aa5.88□□□□□ -1.47
HMGB3P13-201ENST00000511263 CHMP4BQ9H444 224 aaKnown RBP5.88□□□□□ -1.47
HMGB3P13-201ENST00000511263 L2HGDHQ9H9P8 463 aa5.88□□□□□ -1.47
HMGB3P13-201ENST00000511263 SAMD15Q9P1V8 674 aa5.88□□□□□ -1.47
HMGB3P13-201ENST00000511263 FTSJ1Q9UET6 329 aa5.88□□□□□ -1.47
HMGB3P13-201ENST00000511263 ZKSCAN5Q9Y2L8 839 aa5.88□□□□□ -1.47
HMGB3P13-201ENST00000511263 WDR62O43379 1518 aa5.88□□□□□ -1.47
HMGB3P13-201ENST00000511263 PRAMEF25A6NGN4 478 aa5.87□□□□□ -1.47
HMGB3P13-201ENST00000511263 ZNF561-AS1K7EIQ3 104 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms