RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 PSMC4P43686 418 aa18.62■□□□□ 0.57
HMGXB3-201ENST00000502717 MYL7Q01449 175 aa18.62■□□□□ 0.57
HMGXB3-201ENST00000502717 ADCY1Q08828 1119 aa18.62■□□□□ 0.57
HMGXB3-201ENST00000502717 CEP120Q8N960 986 aa18.62■□□□□ 0.57
HMGXB3-201ENST00000502717 DDX27Q96GQ7 796 aaKnown RBP18.62■□□□□ 0.57
HMGXB3-201ENST00000502717 AZI2Q9H6S1 392 aa18.62■□□□□ 0.57
HMGXB3-201ENST00000502717 ANGPTL2Q9UKU9 493 aa18.62■□□□□ 0.57
HMGXB3-201ENST00000502717 TECPR2O15040 1411 aa18.62■□□□□ 0.57
HMGXB3-201ENST00000502717 TRPC3Q13507 836 aa18.62■□□□□ 0.57
HMGXB3-201ENST00000502717 PDXDC1Q6P996 788 aa18.62■□□□□ 0.57
HMGXB3-201ENST00000502717 OTUD6AQ7L8S5 288 aa18.62■□□□□ 0.57
HMGXB3-201ENST00000502717 FAM187AA6NFU0 413 aa18.62■□□□□ 0.57
HMGXB3-201ENST00000502717 BIRC2Q13490 618 aa18.62■□□□□ 0.57
HMGXB3-201ENST00000502717 RASGRF1Q13972 1273 aa18.62■□□□□ 0.57
HMGXB3-201ENST00000502717 PTPAQ15257 358 aa18.62■□□□□ 0.57
HMGXB3-201ENST00000502717 DLGAP5Q15398 846 aa18.62■□□□□ 0.57
HMGXB3-201ENST00000502717 NLRP10Q86W26 655 aa18.62■□□□□ 0.57
HMGXB3-201ENST00000502717 CTAGE3PQ8IX95 158 aa18.62■□□□□ 0.57
HMGXB3-201ENST00000502717 RNPC3Q96LT9 517 aaKnown RBP18.62■□□□□ 0.57
HMGXB3-201ENST00000502717 ZNF148Q9UQR1 794 aa18.62■□□□□ 0.57
HMGXB3-201ENST00000502717 SSU72P8A0A1W2PR75 194 aa18.61■□□□□ 0.57
HMGXB3-201ENST00000502717 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.61■□□□□ 0.57
HMGXB3-201ENST00000502717 TBK1Q9UHD2 729 aa18.61■□□□□ 0.57
HMGXB3-201ENST00000502717 CSADQ9Y600 493 aa18.61■□□□□ 0.57
HMGXB3-201ENST00000502717 CPS1P31327 1500 aa18.61■□□□□ 0.57
HMGXB3-201ENST00000502717 COL3A1P02461 1466 aaPredicted RBP18.61■□□□□ 0.57
HMGXB3-201ENST00000502717 SYNGAP1Q96PV0 1343 aa18.61■□□□□ 0.57
HMGXB3-201ENST00000502717 GUCY1A2P33402 732 aa18.61■□□□□ 0.57
HMGXB3-201ENST00000502717 SEC24CP53992 1094 aa18.61■□□□□ 0.57
HMGXB3-201ENST00000502717 PRR16Q569H4 304 aa18.61■□□□□ 0.57
HMGXB3-201ENST00000502717 ZNF449Q6P9G9 518 aa18.61■□□□□ 0.57
HMGXB3-201ENST00000502717 CAPN12Q6ZSI9 719 aa18.61■□□□□ 0.57
HMGXB3-201ENST00000502717 PIGBQ92521 554 aa18.61■□□□□ 0.57
HMGXB3-201ENST00000502717 LCMT1Q9UIC8 334 aa18.61■□□□□ 0.57
HMGXB3-201ENST00000502717 PREX1Q8TCU6 1659 aa18.61■□□□□ 0.57
HMGXB3-201ENST00000502717 ECM2O94769 699 aaPredicted RBP18.61■□□□□ 0.57
HMGXB3-201ENST00000502717 PAPD7Q5XG87 772 aaKnown RBP18.61■□□□□ 0.57
HMGXB3-201ENST00000502717 GUF1Q8N442 669 aaKnown RBP18.61■□□□□ 0.57
HMGXB3-201ENST00000502717 ATP2A3Q93084 1043 aa18.61■□□□□ 0.57
HMGXB3-201ENST00000502717 RBM12Q9NTZ6 932 aaKnown RBP18.61■□□□□ 0.57
HMGXB3-201ENST00000502717 THEGQ9P2T0 379 aa18.61■□□□□ 0.57
HMGXB3-201ENST00000502717 RSAD2Q8WXG1 361 aa18.61■□□□□ 0.57
HMGXB3-201ENST00000502717 AGPAT5Q9NUQ2 364 aa18.61■□□□□ 0.57
HMGXB3-201ENST00000502717 ZNF335Q9H4Z2 1342 aaPredicted RBP18.6■□□□□ 0.57
HMGXB3-201ENST00000502717 RIMBP3CA6NJZ7 1639 aa18.6■□□□□ 0.57
HMGXB3-201ENST00000502717 RIMBP3BA6NNM3 1639 aa18.6■□□□□ 0.57
HMGXB3-201ENST00000502717 RIMBP3Q9UFD9 1639 aa18.6■□□□□ 0.57
HMGXB3-201ENST00000502717 GAP43P17677 238 aa18.6■□□□□ 0.57
HMGXB3-201ENST00000502717 DYNLL1P63167 89 aaKnown RBP18.6■□□□□ 0.57
HMGXB3-201ENST00000502717 CRYMQ14894 314 aa18.6■□□□□ 0.57
HMGXB3-201ENST00000502717 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.6■□□□□ 0.57
HMGXB3-201ENST00000502717 RASSF10A6NK89 507 aa18.6■□□□□ 0.57
HMGXB3-201ENST00000502717 ERVK-24P63145 666 aa18.6■□□□□ 0.57
HMGXB3-201ENST00000502717 COG7P83436 770 aa18.6■□□□□ 0.57
HMGXB3-201ENST00000502717 DYNC1I2Q13409 638 aaKnown RBP18.6■□□□□ 0.57
HMGXB3-201ENST00000502717 CYP4F22Q6NT55 531 aa18.6■□□□□ 0.57
HMGXB3-201ENST00000502717 PPM1KQ8N3J5 372 aa18.6■□□□□ 0.57
HMGXB3-201ENST00000502717 FAM167BQ9BTA0 163 aa18.6■□□□□ 0.57
HMGXB3-201ENST00000502717 ANTXR2P58335 489 aa18.6■□□□□ 0.57
HMGXB3-201ENST00000502717 HDLBPQ00341 1268 aaKnown RBP18.6■□□□□ 0.57
HMGXB3-201ENST00000502717 MAEAQ7L5Y9 396 aa18.6■□□□□ 0.57
HMGXB3-201ENST00000502717 IGDCC4Q8TDY8 1250 aa18.6■□□□□ 0.57
HMGXB3-201ENST00000502717 TBC1D22AQ8WUA7 517 aa18.6■□□□□ 0.57
HMGXB3-201ENST00000502717 ACSL3O95573 720 aa18.6■□□□□ 0.57
HMGXB3-201ENST00000502717 MSL3Q8N5Y2 521 aaKnown RBP18.6■□□□□ 0.57
HMGXB3-201ENST00000502717 BRIP1Q9BX63 1249 aa18.6■□□□□ 0.57
HMGXB3-201ENST00000502717 NOC2LQ9Y3T9 749 aaKnown RBP18.6■□□□□ 0.57
HMGXB3-201ENST00000502717 CHGBP05060 677 aa18.59■□□□□ 0.57
HMGXB3-201ENST00000502717 USP49Q70CQ1 688 aa18.59■□□□□ 0.57
HMGXB3-201ENST00000502717 DGKHQ86XP1 1220 aa18.59■□□□□ 0.57
HMGXB3-201ENST00000502717 SULF1Q8IWU6 871 aa18.59■□□□□ 0.57
HMGXB3-201ENST00000502717 KIFC2Q96AC6 838 aa18.59■□□□□ 0.57
HMGXB3-201ENST00000502717 ETNK1Q9HBU6 452 aa18.59■□□□□ 0.57
HMGXB3-201ENST00000502717 CD248Q9HCU0 757 aa18.59■□□□□ 0.57
HMGXB3-201ENST00000502717 HPS5Q9UPZ3 1129 aa18.59■□□□□ 0.57
HMGXB3-201ENST00000502717 TNS3Q68CZ2 1445 aa18.59■□□□□ 0.57
HMGXB3-201ENST00000502717 PPP1R3GB7ZBB8 358 aa18.59■□□□□ 0.57
HMGXB3-201ENST00000502717 ATG9AQ7Z3C6 839 aa18.59■□□□□ 0.57
HMGXB3-201ENST00000502717 TRIM42Q8IWZ5 723 aa18.59■□□□□ 0.57
HMGXB3-201ENST00000502717 CCDC24Q8N4L8 307 aa18.59■□□□□ 0.57
HMGXB3-201ENST00000502717 CALR3Q96L12 384 aaKnown RBP18.59■□□□□ 0.57
HMGXB3-201ENST00000502717 DAPK3O43293 454 aa18.59■□□□□ 0.57
HMGXB3-201ENST00000502717 ANKRD40Q6AI12 368 aa18.59■□□□□ 0.57
HMGXB3-201ENST00000502717 CYB5D1Q6P9G0 228 aa18.59■□□□□ 0.57
HMGXB3-201ENST00000502717 TTLL11Q8NHH1 800 aa18.59■□□□□ 0.57
HMGXB3-201ENST00000502717 PPP4R1Q8TF05 950 aa18.59■□□□□ 0.57
HMGXB3-201ENST00000502717 GRAMD1AQ96CP6 724 aa18.59■□□□□ 0.57
HMGXB3-201ENST00000502717 CENPKQ9BS16 269 aa18.59■□□□□ 0.57
HMGXB3-201ENST00000502717 ARHGEF10LQ9HCE6 1279 aa18.59■□□□□ 0.57
HMGXB3-201ENST00000502717 FRMPD2Q68DX3 1309 aaPredicted RBP18.59■□□□□ 0.57
HMGXB3-201ENST00000502717 EXOC1LA0A1B0GW35 172 aa18.59■□□□□ 0.57
HMGXB3-201ENST00000502717 A0A1W2PQJ5 194 aa18.59■□□□□ 0.57
HMGXB3-201ENST00000502717 CARSP49589 748 aaKnown RBP18.59■□□□□ 0.57
HMGXB3-201ENST00000502717 MKRN3Q13064 507 aaKnown RBP18.59■□□□□ 0.57
HMGXB3-201ENST00000502717 SNX1Q13596 522 aa18.59■□□□□ 0.57
HMGXB3-201ENST00000502717 SPARCL1Q14515 664 aa18.59■□□□□ 0.57
HMGXB3-201ENST00000502717 CDC37Q16543 378 aaPredicted RBP18.59■□□□□ 0.57
HMGXB3-201ENST00000502717 ENAHQ8N8S7 591 aaPredicted RBP18.59■□□□□ 0.57
HMGXB3-201ENST00000502717 ZNF653Q96CK0 615 aa18.59■□□□□ 0.57
HMGXB3-201ENST00000502717 NUF2Q9BZD4 464 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms