RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 SERINC2Q96SA4 455 aa5.14□□□□□ -1.59
HMGB1P21-201ENST00000502313 TBCBQ99426 244 aa5.14□□□□□ -1.59
HMGB1P21-201ENST00000502313 RSAD1Q9HA92 442 aa5.14□□□□□ -1.59
HMGB1P21-201ENST00000502313 C1orf112Q9NSG2 853 aa5.14□□□□□ -1.59
HMGB1P21-201ENST00000502313 PGAP2Q9UHJ9 254 aa5.14□□□□□ -1.59
HMGB1P21-201ENST00000502313 PTPN22Q9Y2R2 807 aa5.14□□□□□ -1.59
HMGB1P21-201ENST00000502313 SF3B6Q9Y3B4 125 aaKnown RBP5.14□□□□□ -1.59
HMGB1P21-201ENST00000502313 DNMT1P26358 1616 aaKnown RBP5.14□□□□□ -1.59
HMGB1P21-201ENST00000502313 MROH2AA6NES4 1674 aa5.14□□□□□ -1.59
HMGB1P21-201ENST00000502313 CNTLNQ9NXG0 1405 aa5.14□□□□□ -1.59
HMGB1P21-201ENST00000502313 C3P01024 1663 aa5.13□□□□□ -1.59
HMGB1P21-201ENST00000502313 RIMS1Q86UR5 1692 aaKnown RBP5.13□□□□□ -1.59
HMGB1P21-201ENST00000502313 FAM95CA0A1B0GW59 222 aa5.13□□□□□ -1.59
HMGB1P21-201ENST00000502313 TCRBV16S1A1N1A0A5B0 115 aa5.13□□□□□ -1.59
HMGB1P21-201ENST00000502313 K7ESF4 209 aa5.13□□□□□ -1.59
HMGB1P21-201ENST00000502313 DHX16O60231 1041 aaKnown RBP5.13□□□□□ -1.59
HMGB1P21-201ENST00000502313 FKBP9O95302 570 aa5.13□□□□□ -1.59
HMGB1P21-201ENST00000502313 PYGLP06737 847 aa5.13□□□□□ -1.59
HMGB1P21-201ENST00000502313 CD247P20963 164 aa5.13□□□□□ -1.59
HMGB1P21-201ENST00000502313 FLT3P36888 993 aa5.13□□□□□ -1.59
HMGB1P21-201ENST00000502313 NUCB1Q02818 461 aa5.13□□□□□ -1.59
HMGB1P21-201ENST00000502313 KLF1Q13351 362 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P21-201ENST00000502313 ZNF267Q14586 743 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P21-201ENST00000502313 PPP2R5DQ14738 602 aa5.13□□□□□ -1.59
HMGB1P21-201ENST00000502313 NFKBIBQ15653 356 aa5.13□□□□□ -1.59
HMGB1P21-201ENST00000502313 CLEC16AQ2KHT3 1053 aa5.13□□□□□ -1.59
HMGB1P21-201ENST00000502313 IFIT1BQ5T764 474 aaKnown RBP5.13□□□□□ -1.59
HMGB1P21-201ENST00000502313 LINC00114Q6XXX2 140 aa5.13□□□□□ -1.59
HMGB1P21-201ENST00000502313 C1orf122Q6ZSJ8 110 aa5.13□□□□□ -1.59
HMGB1P21-201ENST00000502313 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P21-201ENST00000502313 FKBP9P1Q75LS8 142 aa5.13□□□□□ -1.59
HMGB1P21-201ENST00000502313 KRT77Q7Z794 578 aa5.13□□□□□ -1.59
HMGB1P21-201ENST00000502313 ANKRD23Q86SG2 305 aa5.13□□□□□ -1.59
HMGB1P21-201ENST00000502313 MYLK4Q86YV6 388 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P21-201ENST00000502313 IL17REQ8NFR9 667 aa5.13□□□□□ -1.59
HMGB1P21-201ENST00000502313 KCTD13Q8WZ19 329 aa5.13□□□□□ -1.59
HMGB1P21-201ENST00000502313 LENG1Q96BZ8 264 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P21-201ENST00000502313 PGBD4Q96DM1 585 aa5.13□□□□□ -1.59
HMGB1P21-201ENST00000502313 AHCYL2Q96HN2 611 aaKnown RBP5.13□□□□□ -1.59
HMGB1P21-201ENST00000502313 CDK5RAP3Q96JB5 506 aa5.13□□□□□ -1.59
HMGB1P21-201ENST00000502313 MAGEB10Q96LZ2 347 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P21-201ENST00000502313 TBATAQ96M53 351 aa5.13□□□□□ -1.59
HMGB1P21-201ENST00000502313 CCDC138Q96M89 665 aa5.13□□□□□ -1.59
HMGB1P21-201ENST00000502313 ZDHHC15Q96MV8 337 aa5.13□□□□□ -1.59
HMGB1P21-201ENST00000502313 SEMA6CQ9H3T2 930 aa5.13□□□□□ -1.59
HMGB1P21-201ENST00000502313 GSX1Q9H4S2 264 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P21-201ENST00000502313 ACSS3Q9H6R3 686 aa5.13□□□□□ -1.59
HMGB1P21-201ENST00000502313 NOL6Q9H6R4 1146 aaKnown RBP5.13□□□□□ -1.59
HMGB1P21-201ENST00000502313 GP6Q9HCN6 339 aa5.13□□□□□ -1.59
HMGB1P21-201ENST00000502313 PRDM5Q9NQX1 630 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P21-201ENST00000502313 APEX2Q9UBZ4 518 aa5.13□□□□□ -1.59
HMGB1P21-201ENST00000502313 GPR52Q9Y2T5 361 aa5.13□□□□□ -1.59
HMGB1P21-201ENST00000502313 PCDHGB6Q9Y5F9 930 aa5.13□□□□□ -1.59
HMGB1P21-201ENST00000502313 ZMYM3Q14202 1370 aa5.13□□□□□ -1.59
HMGB1P21-201ENST00000502313 DAPK1P53355 1430 aa5.13□□□□□ -1.59
HMGB1P21-201ENST00000502313 DEPDC5O75140 1603 aa5.12□□□□□ -1.59
HMGB1P21-201ENST00000502313 PTPN23Q9H3S7 1636 aa5.12□□□□□ -1.59
HMGB1P21-201ENST00000502313 CROCC2H7BZ55 1655 aa5.12□□□□□ -1.59
HMGB1P21-201ENST00000502313 FER1L4A9Z1Z3 1794 aa5.12□□□□□ -1.59
HMGB1P21-201ENST00000502313 LRRC10BA6NIK2 292 aa5.12□□□□□ -1.59
HMGB1P21-201ENST00000502313 TPP1O14773 563 aa5.12□□□□□ -1.59
HMGB1P21-201ENST00000502313 CBFA2T2O43439 604 aa5.12□□□□□ -1.59
HMGB1P21-201ENST00000502313 PQBP1O60828 265 aaKnown RBP5.12□□□□□ -1.59
HMGB1P21-201ENST00000502313 EFCAB14O75071 495 aa5.12□□□□□ -1.59
HMGB1P21-201ENST00000502313 KCNH1O95259 989 aa5.12□□□□□ -1.59
HMGB1P21-201ENST00000502313 CAPNS1P04632 268 aa5.12□□□□□ -1.59
HMGB1P21-201ENST00000502313 SNRPB2P08579 225 aaKnown RBP5.12□□□□□ -1.59
HMGB1P21-201ENST00000502313 BMP3P12645 472 aa5.12□□□□□ -1.59
HMGB1P21-201ENST00000502313 HSPA6P17066 643 aa5.12□□□□□ -1.59
HMGB1P21-201ENST00000502313 MAP4P27816 1152 aaKnown RBP5.12□□□□□ -1.59
HMGB1P21-201ENST00000502313 GABREP78334 506 aa5.12□□□□□ -1.59
HMGB1P21-201ENST00000502313 AMPD2Q01433 879 aa5.12□□□□□ -1.59
HMGB1P21-201ENST00000502313 G3BP1Q13283 466 aaKnown RBP eCLIP5.12□□□□□ -1.59
HMGB1P21-201ENST00000502313 PDE1CQ14123 709 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P21-201ENST00000502313 SART3Q15020 963 aaKnown RBP5.12□□□□□ -1.59
HMGB1P21-201ENST00000502313 ANKRD39Q53RE8 183 aa5.12□□□□□ -1.59
HMGB1P21-201ENST00000502313 SGO2Q562F6 1265 aa5.12□□□□□ -1.59
HMGB1P21-201ENST00000502313 SPECC1Q5M775 1068 aa5.12□□□□□ -1.59
HMGB1P21-201ENST00000502313 DUSP27Q5VZP5 1158 aa5.12□□□□□ -1.59
HMGB1P21-201ENST00000502313 MZT2BQ6NZ67 158 aa5.12□□□□□ -1.59
HMGB1P21-201ENST00000502313 FAM180BQ6P0A1 224 aa5.12□□□□□ -1.59
HMGB1P21-201ENST00000502313 ILDR2Q71H61 639 aa5.12□□□□□ -1.59
HMGB1P21-201ENST00000502313 CATIPQ7Z7H3 387 aa5.12□□□□□ -1.59
HMGB1P21-201ENST00000502313 FIBCD1Q8N539 461 aa5.12□□□□□ -1.59
HMGB1P21-201ENST00000502313 SPATA5Q8NB90 893 aa5.12□□□□□ -1.59
HMGB1P21-201ENST00000502313 SCARF2Q96GP6 870 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P21-201ENST00000502313 TAAR9Q96RI9 348 aa5.12□□□□□ -1.59
HMGB1P21-201ENST00000502313 APOL5Q9BWW9 433 aa5.12□□□□□ -1.59
HMGB1P21-201ENST00000502313 SMOC1Q9H4F8 434 aa5.12□□□□□ -1.59
HMGB1P21-201ENST00000502313 NMRK2Q9NPI5 230 aa5.12□□□□□ -1.59
HMGB1P21-201ENST00000502313 RIC8AQ9NPQ8 531 aa5.12□□□□□ -1.59
HMGB1P21-201ENST00000502313 MKS1Q9NXB0 559 aa5.12□□□□□ -1.59
HMGB1P21-201ENST00000502313 RRN3Q9NYV6 651 aa5.12□□□□□ -1.59
HMGB1P21-201ENST00000502313 CGGBP1Q9UFW8 167 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P21-201ENST00000502313 ZNF451Q9Y4E5 1061 aa5.12□□□□□ -1.59
HMGB1P21-201ENST00000502313 FHOD1Q9Y613 1164 aa5.12□□□□□ -1.59
HMGB1P21-201ENST00000502313 ARHGAP31Q2M1Z3 1444 aa5.12□□□□□ -1.59
HMGB1P21-201ENST00000502313 RRBP1Q9P2E9 1410 aaKnown RBP5.12□□□□□ -1.59
HMGB1P21-201ENST00000502313 PRDM15P57071 1507 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P21-201ENST00000502313 LMTK2Q8IWU2 1503 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms