RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 ERAP1Q9NZ08 941 aa12.81□□□□□ -0.36
NUP50-216ENST00000486184 CHMP5Q9NZZ3 219 aa12.81□□□□□ -0.36
NUP50-216ENST00000486184 VAV3Q9UKW4 847 aa12.81□□□□□ -0.36
NUP50-216ENST00000486184 CLIC4Q9Y696 253 aa12.81□□□□□ -0.36
NUP50-216ENST00000486184 STK24Q9Y6E0 443 aa12.81□□□□□ -0.36
NUP50-216ENST00000486184 ARID2Q68CP9 1835 aa12.81□□□□□ -0.36
NUP50-216ENST00000486184 VWA3AA6NCI4 1184 aa12.8□□□□□ -0.36
NUP50-216ENST00000486184 POTEMA6NI47 508 aa12.8□□□□□ -0.36
NUP50-216ENST00000486184 DKC1O60832 514 aaKnown RBP eCLIP12.8□□□□□ -0.36
NUP50-216ENST00000486184 ATG7O95352 703 aa12.8□□□□□ -0.36
NUP50-216ENST00000486184 F2P00734 622 aa12.8□□□□□ -0.36
NUP50-216ENST00000486184 DDIT3P35638 169 aa12.8□□□□□ -0.36
NUP50-216ENST00000486184 PSEN2P49810 448 aa12.8□□□□□ -0.36
NUP50-216ENST00000486184 SLC26A2P50443 739 aa12.8□□□□□ -0.36
NUP50-216ENST00000486184 KRT85P78386 507 aa12.8□□□□□ -0.36
NUP50-216ENST00000486184 MFSD10Q14728 455 aa12.8□□□□□ -0.36
NUP50-216ENST00000486184 KIAA0753Q2KHM9 967 aa12.8□□□□□ -0.36
NUP50-216ENST00000486184 FAM47CQ5HY64 1035 aa12.8□□□□□ -0.36
NUP50-216ENST00000486184 HAUS3Q68CZ6 603 aa12.8□□□□□ -0.36
NUP50-216ENST00000486184 SWSAP1Q6NVH7 229 aa12.8□□□□□ -0.36
NUP50-216ENST00000486184 PDXDC2PQ6P474 469 aa12.8□□□□□ -0.36
NUP50-216ENST00000486184 ABHD15Q6UXT9 468 aa12.8□□□□□ -0.36
NUP50-216ENST00000486184 TRIM50Q86XT4 487 aa12.8□□□□□ -0.36
NUP50-216ENST00000486184 C7orf31Q8N865 590 aa12.8□□□□□ -0.36
NUP50-216ENST00000486184 C4orf32Q8N8J7 132 aa12.8□□□□□ -0.36
NUP50-216ENST00000486184 SEZ6LQ9BYH1 1024 aa12.8□□□□□ -0.36
NUP50-216ENST00000486184 FTOQ9C0B1 505 aaKnown RBP eCLIP12.8□□□□□ -0.36
NUP50-216ENST00000486184 TFIP11Q9UBB9 837 aaKnown RBP12.8□□□□□ -0.36
NUP50-216ENST00000486184 GABBR1Q9UBS5 961 aa12.8□□□□□ -0.36
NUP50-216ENST00000486184 LRWD1Q9UFC0 647 aa12.8□□□□□ -0.36
NUP50-216ENST00000486184 TRPC6Q9Y210 931 aa12.8□□□□□ -0.36
NUP50-216ENST00000486184 ZDHHC9Q9Y397 364 aa12.8□□□□□ -0.36
NUP50-216ENST00000486184 TELO2Q9Y4R8 837 aa12.8□□□□□ -0.36
NUP50-216ENST00000486184 LGR5O75473 907 aa12.79□□□□□ -0.36
NUP50-216ENST00000486184 YEATS4O95619 227 aa12.79□□□□□ -0.36
NUP50-216ENST00000486184 MARK3P27448 753 aa12.79□□□□□ -0.36
NUP50-216ENST00000486184 NASPP49321 788 aaPredicted RBP12.79□□□□□ -0.36
NUP50-216ENST00000486184 MNX1P50219 401 aaPredicted RBP12.79□□□□□ -0.36
NUP50-216ENST00000486184 ATN1P54259 1190 aaPredicted RBP12.79□□□□□ -0.36
NUP50-216ENST00000486184 PSMC6P62333 389 aa12.79□□□□□ -0.36
NUP50-216ENST00000486184 DNM1Q05193 864 aaKnown RBP12.79□□□□□ -0.36
NUP50-216ENST00000486184 ITGA7Q13683 1181 aa12.79□□□□□ -0.36
NUP50-216ENST00000486184 EPHA7Q15375 998 aa12.79□□□□□ -0.36
NUP50-216ENST00000486184 PLPPR4Q7Z2D5 763 aa12.79□□□□□ -0.36
NUP50-216ENST00000486184 CCDC60Q8IWA6 550 aaPredicted RBP12.79□□□□□ -0.36
NUP50-216ENST00000486184 NEK9Q8TD19 979 aa12.79□□□□□ -0.36
NUP50-216ENST00000486184 AFAP1L1Q8TED9 768 aa12.79□□□□□ -0.36
NUP50-216ENST00000486184 C16orf70Q9BSU1 422 aa12.79□□□□□ -0.36
NUP50-216ENST00000486184 HTATIP2Q9BUP3 242 aa12.79□□□□□ -0.36
NUP50-216ENST00000486184 ALPK3Q96L96 1907 aa12.79□□□□□ -0.36
NUP50-216ENST00000486184 MROH7Q68CQ1 1323 aa12.79□□□□□ -0.36
NUP50-216ENST00000486184 TRIP12Q14669 1992 aaPredicted RBP12.78□□□□□ -0.36
NUP50-216ENST00000486184 CENPFP49454 3210 aa12.78□□□□□ -0.36
NUP50-216ENST00000486184 IGKV6D-21A0A0A0MT36 114 aa12.78□□□□□ -0.36
NUP50-216ENST00000486184 EML1O00423 815 aa12.78□□□□□ -0.36
NUP50-216ENST00000486184 SPTLC2O15270 562 aa12.78□□□□□ -0.36
NUP50-216ENST00000486184 TLR3O15455 904 aaKnown RBP12.78□□□□□ -0.36
NUP50-216ENST00000486184 P4HBP07237 508 aaKnown RBP12.78□□□□□ -0.36
NUP50-216ENST00000486184 COL6A1P12109 1028 aa12.78□□□□□ -0.36
NUP50-216ENST00000486184 MARCKSP29966 332 aaPredicted RBP12.78□□□□□ -0.36
NUP50-216ENST00000486184 PSMC5P62195 406 aa12.78□□□□□ -0.36
NUP50-216ENST00000486184 SPIRE1Q08AE8 756 aa12.78□□□□□ -0.36
NUP50-216ENST00000486184 PDIA5Q14554 519 aa12.78□□□□□ -0.36
NUP50-216ENST00000486184 SLC39A14Q15043 492 aa12.78□□□□□ -0.36
NUP50-216ENST00000486184 NBPF20Q3BBV1 942 aa12.78□□□□□ -0.36
NUP50-216ENST00000486184 KRT79Q5XKE5 535 aa12.78□□□□□ -0.36
NUP50-216ENST00000486184 SLC39A5Q6ZMH5 540 aa12.78□□□□□ -0.36
NUP50-216ENST00000486184 BANK1Q8NDB2 785 aa12.78□□□□□ -0.36
NUP50-216ENST00000486184 RASSF8Q8NHQ8 419 aa12.78□□□□□ -0.36
NUP50-216ENST00000486184 KCNG4Q8TDN1 519 aa12.78□□□□□ -0.36
NUP50-216ENST00000486184 FAM167AQ96KS9 214 aa12.78□□□□□ -0.36
NUP50-216ENST00000486184 CCDC43Q96MW1 224 aaKnown RBP12.78□□□□□ -0.36
NUP50-216ENST00000486184 NOD1Q9Y239 953 aa12.78□□□□□ -0.36
NUP50-216ENST00000486184 IGSF9BQ9UPX0 1349 aa12.78□□□□□ -0.36
NUP50-216ENST00000486184 POTEB3A0JP26 581 aa12.77□□□□□ -0.37
NUP50-216ENST00000486184 ARVCFO00192 962 aa12.77□□□□□ -0.37
NUP50-216ENST00000486184 GNAT1P11488 350 aa12.77□□□□□ -0.37
NUP50-216ENST00000486184 LONP1P36776 959 aaKnown RBP12.77□□□□□ -0.37
NUP50-216ENST00000486184 TXLNAP40222 546 aa12.77□□□□□ -0.37
NUP50-216ENST00000486184 CCT6AP40227 531 aaKnown RBP12.77□□□□□ -0.37
NUP50-216ENST00000486184 QARSP47897 775 aaKnown RBP12.77□□□□□ -0.37
NUP50-216ENST00000486184 PRKCEQ02156 737 aa12.77□□□□□ -0.37
NUP50-216ENST00000486184 CYP4A11Q02928 519 aa12.77□□□□□ -0.37
NUP50-216ENST00000486184 PTPN11Q06124 597 aaPredicted RBP12.77□□□□□ -0.37
NUP50-216ENST00000486184 PTPAQ15257 358 aa12.77□□□□□ -0.37
NUP50-216ENST00000486184 NFRKBQ6P4R8 1299 aa12.77□□□□□ -0.37
NUP50-216ENST00000486184 POTEBQ6S5H4 581 aa12.77□□□□□ -0.37
NUP50-216ENST00000486184 B3GNT9Q6UX72 402 aa12.77□□□□□ -0.37
NUP50-216ENST00000486184 TRMT1LQ7Z2T5 733 aaKnown RBP12.77□□□□□ -0.37
NUP50-216ENST00000486184 TPH2Q8IWU9 490 aa12.77□□□□□ -0.37
NUP50-216ENST00000486184 KRI1Q8N9T8 703 aaKnown RBP12.77□□□□□ -0.37
NUP50-216ENST00000486184 LINC00301Q8NCQ3 95 aa12.77□□□□□ -0.37
NUP50-216ENST00000486184 SNX29Q8TEQ0 813 aa12.77□□□□□ -0.37
NUP50-216ENST00000486184 KAT2BQ92831 832 aa12.77□□□□□ -0.37
NUP50-216ENST00000486184 DYDC2Q96IM9 177 aa12.77□□□□□ -0.37
NUP50-216ENST00000486184 CDK5RAP3Q96JB5 506 aa12.77□□□□□ -0.37
NUP50-216ENST00000486184 SPATA32Q96LK8 384 aa12.77□□□□□ -0.37
NUP50-216ENST00000486184 AK8Q96MA6 479 aa12.77□□□□□ -0.37
NUP50-216ENST00000486184 PCYT2Q99447 389 aa12.77□□□□□ -0.37
NUP50-216ENST00000486184 EIF2AK1Q9BQI3 630 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms