RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 KCNQ2O43526 872 aa6.94□□□□□ -1.3
SMARCC1-207ENST00000485833 CKMP06732 381 aa6.94□□□□□ -1.3
SMARCC1-207ENST00000485833 ENO2P09104 434 aaPredicted RBP6.94□□□□□ -1.3
SMARCC1-207ENST00000485833 PTPN1P18031 435 aaKnown RBP6.94□□□□□ -1.3
SMARCC1-207ENST00000485833 KRT15P19012 456 aa6.94□□□□□ -1.3
SMARCC1-207ENST00000485833 DNM2P50570 870 aa6.94□□□□□ -1.3
SMARCC1-207ENST00000485833 KIAA2012Q0VF49 1180 aa6.94□□□□□ -1.3
SMARCC1-207ENST00000485833 SKIDA1Q1XH10 827 aa6.94□□□□□ -1.3
SMARCC1-207ENST00000485833 BTBD8Q5XKL5 378 aa6.94□□□□□ -1.3
SMARCC1-207ENST00000485833 BRAPQ7Z569 592 aa6.94□□□□□ -1.3
SMARCC1-207ENST00000485833 FERMT3Q86UX7 667 aa6.94□□□□□ -1.3
SMARCC1-207ENST00000485833 FAM124AQ86V42 546 aa6.94□□□□□ -1.3
SMARCC1-207ENST00000485833 OSTM1Q86WC4 334 aa6.94□□□□□ -1.3
SMARCC1-207ENST00000485833 DDX1Q92499 740 aaKnown RBP6.94□□□□□ -1.3
SMARCC1-207ENST00000485833 LCORQ96JN0 433 aaPredicted RBP6.94□□□□□ -1.3
SMARCC1-207ENST00000485833 MAGEB10Q96LZ2 347 aaPredicted RBP6.94□□□□□ -1.3
SMARCC1-207ENST00000485833 ZSWIM4Q9H7M6 989 aa6.94□□□□□ -1.3
SMARCC1-207ENST00000485833 NCOA5Q9HCD5 579 aaKnown RBP6.94□□□□□ -1.3
SMARCC1-207ENST00000485833 ATP23Q9Y6H3 246 aa6.94□□□□□ -1.3
SMARCC1-207ENST00000485833 CFTRP13569 1480 aa6.93□□□□□ -1.3
SMARCC1-207ENST00000485833 CYP1A1P04798 512 aaPredicted RBP6.93□□□□□ -1.3
SMARCC1-207ENST00000485833 COL6A1P12109 1028 aa6.93□□□□□ -1.3
SMARCC1-207ENST00000485833 GJA4P35212 333 aa6.93□□□□□ -1.3
SMARCC1-207ENST00000485833 JAM2P57087 298 aa6.93□□□□□ -1.3
SMARCC1-207ENST00000485833 TRMT10BQ6PF06 316 aaKnown RBP6.93□□□□□ -1.3
SMARCC1-207ENST00000485833 BORAQ6PGQ7 559 aa6.93□□□□□ -1.3
SMARCC1-207ENST00000485833 EP400NLQ6ZTU2 488 aa6.93□□□□□ -1.3
SMARCC1-207ENST00000485833 SCLYQ96I15 445 aa6.93□□□□□ -1.3
SMARCC1-207ENST00000485833 BDH2Q9BUT1 245 aa6.93□□□□□ -1.3
SMARCC1-207ENST00000485833 KRTAP4-7Q9BYR0 210 aa6.93□□□□□ -1.3
SMARCC1-207ENST00000485833 TMEM168Q9H0V1 697 aa6.93□□□□□ -1.3
SMARCC1-207ENST00000485833 SMURF1Q9HCE7 757 aa6.93□□□□□ -1.3
SMARCC1-207ENST00000485833 RIC8BQ9NVN3 520 aa6.93□□□□□ -1.3
SMARCC1-207ENST00000485833 FTSJ1Q9UET6 329 aa6.93□□□□□ -1.3
SMARCC1-207ENST00000485833 ZFP69BQ9UJL9 534 aa6.93□□□□□ -1.3
SMARCC1-207ENST00000485833 FAM90A27PA6NNH2 459 aa6.92□□□□□ -1.3
SMARCC1-207ENST00000485833 PLD2O14939 933 aa6.92□□□□□ -1.3
SMARCC1-207ENST00000485833 CHGBP05060 677 aa6.92□□□□□ -1.3
SMARCC1-207ENST00000485833 CELA3BP08861 270 aa6.92□□□□□ -1.3
SMARCC1-207ENST00000485833 LACTBP83111 547 aaPredicted RBP6.92□□□□□ -1.3
SMARCC1-207ENST00000485833 PFKPQ01813 784 aa6.92□□□□□ -1.3
SMARCC1-207ENST00000485833 SMAD2Q15796 467 aaKnown RBP6.92□□□□□ -1.3
SMARCC1-207ENST00000485833 CCDC144BQ3MJ40 725 aa6.92□□□□□ -1.3
SMARCC1-207ENST00000485833 PHF19Q5T6S3 580 aa6.92□□□□□ -1.3
SMARCC1-207ENST00000485833 LGI4Q8N135 537 aa6.92□□□□□ -1.3
SMARCC1-207ENST00000485833 CISD2Q8N5K1 135 aaKnown RBP6.92□□□□□ -1.3
SMARCC1-207ENST00000485833 CELF4Q9BZC1 486 aaKnown RBP6.92□□□□□ -1.3
SMARCC1-207ENST00000485833 TRIM39Q9HCM9 518 aa6.92□□□□□ -1.3
SMARCC1-207ENST00000485833 ARHGAP20Q9P2F6 1191 aa6.92□□□□□ -1.3
SMARCC1-207ENST00000485833 COQ6Q9Y2Z9 468 aa6.92□□□□□ -1.3
SMARCC1-207ENST00000485833 CLASP2O75122 1294 aaKnown RBP6.91□□□□□ -1.3
SMARCC1-207ENST00000485833 FBXO21O94952 628 aa6.91□□□□□ -1.3
SMARCC1-207ENST00000485833 GLRBP48167 497 aa6.91□□□□□ -1.3
SMARCC1-207ENST00000485833 DBPQ10586 325 aaPredicted RBP6.91□□□□□ -1.3
SMARCC1-207ENST00000485833 SQSTM1Q13501 440 aa6.91□□□□□ -1.3
SMARCC1-207ENST00000485833 SKOR2Q2VWA4 1001 aaPredicted RBP6.91□□□□□ -1.3
SMARCC1-207ENST00000485833 HHIPL2Q6UWX4 724 aa6.91□□□□□ -1.3
SMARCC1-207ENST00000485833 FGD2Q7Z6J4 655 aa6.91□□□□□ -1.3
SMARCC1-207ENST00000485833 IGDCC4Q8TDY8 1250 aa6.91□□□□□ -1.3
SMARCC1-207ENST00000485833 KCND1Q9NSA2 647 aa6.91□□□□□ -1.3
SMARCC1-207ENST00000485833 IFT140Q96RY7 1462 aa6.91□□□□□ -1.3
SMARCC1-207ENST00000485833 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.9□□□□□ -1.3
SMARCC1-207ENST00000485833 TCRBV16S1A1N1A0A5B0 115 aa6.9□□□□□ -1.3
SMARCC1-207ENST00000485833 KCNK3O14649 394 aa6.9□□□□□ -1.3
SMARCC1-207ENST00000485833 SH3TC2Q8TF17 1288 aa6.9□□□□□ -1.3
SMARCC1-207ENST00000485833 MBD6Q96DN6 1003 aa6.9□□□□□ -1.3
SMARCC1-207ENST00000485833 SLC39A2Q9NP94 309 aa6.9□□□□□ -1.3
SMARCC1-207ENST00000485833 INVSQ9Y283 1065 aa6.9□□□□□ -1.3
SMARCC1-207ENST00000485833 RSF1Q96T23 1441 aaPredicted RBP6.9□□□□□ -1.31
SMARCC1-207ENST00000485833 AQRO60306 1485 aaKnown RBP eCLIP6.9□□□□□ -1.31
SMARCC1-207ENST00000485833 KLHL18O94889 574 aa6.89□□□□□ -1.31
SMARCC1-207ENST00000485833 RAPGEF3O95398 923 aa6.89□□□□□ -1.31
SMARCC1-207ENST00000485833 NPTXRO95502 500 aa6.89□□□□□ -1.31
SMARCC1-207ENST00000485833 KNG1P01042 644 aa6.89□□□□□ -1.31
SMARCC1-207ENST00000485833 BUD31P41223 144 aaPredicted RBP6.89□□□□□ -1.31
SMARCC1-207ENST00000485833 PLP2Q04941 152 aa6.89□□□□□ -1.31
SMARCC1-207ENST00000485833 FNDC3BQ53EP0 1204 aaKnown RBP6.89□□□□□ -1.31
SMARCC1-207ENST00000485833 PKN3Q6P5Z2 889 aa6.89□□□□□ -1.31
SMARCC1-207ENST00000485833 PLEKHH3Q7Z736 793 aa6.89□□□□□ -1.31
SMARCC1-207ENST00000485833 NOSTRINQ8IVI9 506 aa6.89□□□□□ -1.31
SMARCC1-207ENST00000485833 KLHL36Q8N4N3 616 aa6.89□□□□□ -1.31
SMARCC1-207ENST00000485833 STPG3Q8N7X2 389 aa6.89□□□□□ -1.31
SMARCC1-207ENST00000485833 ARHGAP28Q9P2N2 729 aa6.89□□□□□ -1.31
SMARCC1-207ENST00000485833 CNOT11Q9UKZ1 510 aaKnown RBP6.89□□□□□ -1.31
SMARCC1-207ENST00000485833 CLASP1Q7Z460 1538 aa6.89□□□□□ -1.31
SMARCC1-207ENST00000485833 PRDM2Q13029 1718 aa6.88□□□□□ -1.31
SMARCC1-207ENST00000485833 PRAMEF25A6NGN4 478 aa6.88□□□□□ -1.31
SMARCC1-207ENST00000485833 B4GALT3O60512 393 aa6.88□□□□□ -1.31
SMARCC1-207ENST00000485833 IL18BPO95998 194 aa6.88□□□□□ -1.31
SMARCC1-207ENST00000485833 C4BPAP04003 597 aaKnown RBP6.88□□□□□ -1.31
SMARCC1-207ENST00000485833 KCNA6P17658 529 aa6.88□□□□□ -1.31
SMARCC1-207ENST00000485833 AOAHP28039 575 aa6.88□□□□□ -1.31
SMARCC1-207ENST00000485833 HERVK_113P62684 666 aa6.88□□□□□ -1.31
SMARCC1-207ENST00000485833 NFATC3Q12968 1075 aa6.88□□□□□ -1.31
SMARCC1-207ENST00000485833 ABHD17CQ6PCB6 329 aa6.88□□□□□ -1.31
SMARCC1-207ENST00000485833 OVCH1Q7RTY7 1134 aa6.88□□□□□ -1.31
SMARCC1-207ENST00000485833 NUDT10Q8NFP7 164 aa6.88□□□□□ -1.31
SMARCC1-207ENST00000485833 NUDT11Q96G61 164 aa6.88□□□□□ -1.31
SMARCC1-207ENST00000485833 TACO1Q9BSH4 297 aaKnown RBP6.88□□□□□ -1.31
SMARCC1-207ENST00000485833 PIF1Q9H611 641 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms