RNA–Protein interactions for RNA: ENST00000479976.5

CHTF18-209, Transcript of chromosome transmission fidelity factor 18, human

TSL 2

Gene CHTF18, Length 1,110 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHTF18-209	ENST00000479976	MYOCD	Q8IZQ8	938 aa		32.44	■■■□□ 2.78
CHTF18-209	ENST00000479976	CCDC12	Q8WUD4	166 aa	Predicted RBP	32.44	■■■□□ 2.78
CHTF18-209	ENST00000479976	TSPYL2	Q9H2G4	693 aa	Predicted RBP	32.44	■■■□□ 2.78
CHTF18-209	ENST00000479976	TUBE1	Q9UJT0	475 aa		32.44	■■■□□ 2.78
CHTF18-209	ENST00000479976	INSL6	Q9Y581	213 aa		32.44	■■■□□ 2.78
CHTF18-209	ENST00000479976	PRRC2B	Q5JSZ5	2229 aa	Known RBP	32.43	■■■□□ 2.78
CHTF18-209	ENST00000479976	MBLAC1	A4D2B0	266 aa	Predicted RBP	32.43	■■■□□ 2.78
CHTF18-209	ENST00000479976	CHRNA1	P02708	482 aa		32.43	■■■□□ 2.78
CHTF18-209	ENST00000479976	ITGB3BP	Q13352	177 aa	Predicted RBP	32.43	■■■□□ 2.78
CHTF18-209	ENST00000479976	MARCH8	Q5T0T0	291 aa		32.43	■■■□□ 2.78
CHTF18-209	ENST00000479976	C6orf50	Q9HD87	102 aa		32.43	■■■□□ 2.78
CHTF18-209	ENST00000479976	RRN3P2	A6NIE6	340 aa		32.42	■■■□□ 2.78
CHTF18-209	ENST00000479976	NEFL	P07196	543 aa		32.42	■■■□□ 2.78
CHTF18-209	ENST00000479976	EVC	P57679	992 aa		32.42	■■■□□ 2.78
CHTF18-209	ENST00000479976	AKAP17A	Q02040	695 aa	Known RBP	32.42	■■■□□ 2.78
CHTF18-209	ENST00000479976	NTRK3	Q16288	839 aa		32.42	■■■□□ 2.78
CHTF18-209	ENST00000479976	MCTP2	Q6DN12	878 aa		32.42	■■■□□ 2.78
CHTF18-209	ENST00000479976	RSPH3	Q86UC2	560 aa		32.42	■■■□□ 2.78
CHTF18-209	ENST00000479976	APBB2	Q92870	758 aa		32.42	■■■□□ 2.78
CHTF18-209	ENST00000479976	TNPO1	Q92973	898 aa	Known RBP	32.42	■■■□□ 2.78
CHTF18-209	ENST00000479976	PHKB	Q93100	1093 aa		32.42	■■■□□ 2.78
CHTF18-209	ENST00000479976	XIRP2	A4UGR9	3374 aa		32.42	■■■□□ 2.78
CHTF18-209	ENST00000479976	LINC01553	A4QN01	128 aa		32.41	■■■□□ 2.78
CHTF18-209	ENST00000479976	INSRR	P14616	1297 aa		32.41	■■■□□ 2.78
CHTF18-209	ENST00000479976	GRB10	Q13322	594 aa		32.41	■■■□□ 2.78
CHTF18-209	ENST00000479976	RUFY3	Q7L099	469 aa		32.41	■■■□□ 2.78
CHTF18-209	ENST00000479976	PLPPR4	Q7Z2D5	763 aa		32.41	■■■□□ 2.78
CHTF18-209	ENST00000479976	CRYGN	Q8WXF5	182 aa		32.41	■■■□□ 2.78
CHTF18-209	ENST00000479976	ASB2	Q96Q27	587 aa		32.41	■■■□□ 2.78
CHTF18-209	ENST00000479976	TGS1	Q96RS0	853 aa	Known RBP	32.41	■■■□□ 2.78
CHTF18-209	ENST00000479976	IFIH1	Q9BYX4	1025 aa	Known RBP	32.41	■■■□□ 2.78
CHTF18-209	ENST00000479976	FAM86B1	E9PN63	330 aa		32.4	■■■□□ 2.78
CHTF18-209	ENST00000479976	ATG7	O95352	703 aa		32.4	■■■□□ 2.78
CHTF18-209	ENST00000479976	CYP3A4	P08684	503 aa		32.4	■■■□□ 2.78
CHTF18-209	ENST00000479976	FAM86B2	P0C5J1	330 aa		32.4	■■■□□ 2.78
CHTF18-209	ENST00000479976	PDIA3	P30101	505 aa	Known RBP	32.4	■■■□□ 2.78
CHTF18-209	ENST00000479976	STAT5B	P51692	787 aa		32.4	■■■□□ 2.78
CHTF18-209	ENST00000479976	ERVK-21	P61565	698 aa		32.4	■■■□□ 2.78
CHTF18-209	ENST00000479976	IGBP1	P78318	339 aa		32.4	■■■□□ 2.78
CHTF18-209	ENST00000479976	MRPS5	P82675	430 aa	Known RBP	32.4	■■■□□ 2.78
CHTF18-209	ENST00000479976	HTRA4	P83105	476 aa	Predicted RBP	32.4	■■■□□ 2.78
CHTF18-209	ENST00000479976	KRT40	Q6A162	431 aa		32.4	■■■□□ 2.78
CHTF18-209	ENST00000479976	DNAJB3	Q8WWF6	145 aa		32.4	■■■□□ 2.78
CHTF18-209	ENST00000479976	TOP1MT	Q969P6	601 aa		32.4	■■■□□ 2.78
CHTF18-209	ENST00000479976	ZSWIM6	Q9HCJ5	1215 aa		32.4	■■■□□ 2.78
CHTF18-209	ENST00000479976	ADAMTS3	O15072	1205 aa		32.39	■■■□□ 2.78
CHTF18-209	ENST00000479976	LPXN	O60711	386 aa		32.39	■■■□□ 2.78
CHTF18-209	ENST00000479976	GNA11	P29992	359 aa		32.39	■■■□□ 2.78
CHTF18-209	ENST00000479976	PLA2G4D	Q86XP0	818 aa		32.39	■■■□□ 2.78
CHTF18-209	ENST00000479976	REXO1	Q8N1G1	1221 aa	Known RBP	32.39	■■■□□ 2.78
CHTF18-209	ENST00000479976	RNF26	Q9BY78	433 aa	Predicted RBP	32.39	■■■□□ 2.78
CHTF18-209	ENST00000479976	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	32.38	■■■□□ 2.77
CHTF18-209	ENST00000479976	IFNAR1	P17181	557 aa		32.38	■■■□□ 2.77
CHTF18-209	ENST00000479976	MGAT3	Q09327	533 aa		32.38	■■■□□ 2.77
CHTF18-209	ENST00000479976	PLCB4	Q15147	1175 aa		32.38	■■■□□ 2.77
CHTF18-209	ENST00000479976	MTUS1	Q9ULD2	1270 aa		32.38	■■■□□ 2.77
CHTF18-209	ENST00000479976	TRPC6	Q9Y210	931 aa		32.38	■■■□□ 2.77
CHTF18-209	ENST00000479976	IGLV3-22	A0A075B6J6	115 aa		32.37	■■■□□ 2.77
CHTF18-209	ENST00000479976	RPLP2	P05387	115 aa	Known RBP	32.37	■■■□□ 2.77
CHTF18-209	ENST00000479976	CCT2	P78371	535 aa	Known RBP	32.37	■■■□□ 2.77
CHTF18-209	ENST00000479976	SLC26A6	Q9BXS9	759 aa		32.37	■■■□□ 2.77
CHTF18-209	ENST00000479976	SUGCT	Q9HAC7	445 aa		32.37	■■■□□ 2.77
CHTF18-209	ENST00000479976	TTC28	Q96AY4	2481 aa		32.36	■■■□□ 2.77
CHTF18-209	ENST00000479976	PPFIA3	O75145	1194 aa		32.36	■■■□□ 2.77
CHTF18-209	ENST00000479976	CCNE2	O96020	404 aa		32.36	■■■□□ 2.77
CHTF18-209	ENST00000479976	GHR	P10912	638 aa		32.36	■■■□□ 2.77
CHTF18-209	ENST00000479976	SLC26A2	P50443	739 aa		32.36	■■■□□ 2.77
CHTF18-209	ENST00000479976	TOB2	Q14106	344 aa	Predicted RBP	32.36	■■■□□ 2.77
CHTF18-209	ENST00000479976	SKIV2L	Q15477	1246 aa	Known RBP	32.36	■■■□□ 2.77
CHTF18-209	ENST00000479976	NCOA5	Q9HCD5	579 aa	Known RBP	32.36	■■■□□ 2.77
CHTF18-209	ENST00000479976	LMCD1	Q9NZU5	365 aa		32.36	■■■□□ 2.77
CHTF18-209	ENST00000479976	CYP46A1	Q9Y6A2	500 aa		32.36	■■■□□ 2.77
CHTF18-209	ENST00000479976	IGKV6D-21	A0A0A0MT36	114 aa		32.35	■■■□□ 2.77
CHTF18-209	ENST00000479976	DDX39A	O00148	427 aa	Known RBP	32.35	■■■□□ 2.77
CHTF18-209	ENST00000479976	IPO5	O00410	1097 aa	Known RBP	32.35	■■■□□ 2.77
CHTF18-209	ENST00000479976	DHX15	O43143	795 aa	Known RBP	32.35	■■■□□ 2.77
CHTF18-209	ENST00000479976	UPP2	O95045	317 aa		32.35	■■■□□ 2.77
CHTF18-209	ENST00000479976	LPIN1	Q14693	890 aa		32.35	■■■□□ 2.77
CHTF18-209	ENST00000479976	ABHD15	Q6UXT9	468 aa		32.35	■■■□□ 2.77
CHTF18-209	ENST00000479976	BICD2	Q8TD16	824 aa		32.35	■■■□□ 2.77
CHTF18-209	ENST00000479976	SP7	Q8TDD2	431 aa	Predicted RBP	32.35	■■■□□ 2.77
CHTF18-209	ENST00000479976	GDPD5	Q8WTR4	605 aa		32.35	■■■□□ 2.77
CHTF18-209	ENST00000479976	ZBTB10	Q96DT7	871 aa		32.35	■■■□□ 2.77
CHTF18-209	ENST00000479976	CDY2A	Q9Y6F7	541 aa		32.35	■■■□□ 2.77
CHTF18-209	ENST00000479976	POTEB3	A0JP26	581 aa		32.34	■■■□□ 2.77
CHTF18-209	ENST00000479976	POTEB	Q6S5H4	581 aa		32.34	■■■□□ 2.77
CHTF18-209	ENST00000479976	CCDC148	Q8NFR7	591 aa		32.34	■■■□□ 2.77
CHTF18-209	ENST00000479976	YME1L1	Q96TA2	773 aa		32.34	■■■□□ 2.77
CHTF18-209	ENST00000479976	TM6SF1	Q9BZW5	370 aa		32.34	■■■□□ 2.77
CHTF18-209	ENST00000479976	FAM49A	Q9H0Q0	323 aa	Predicted RBP	32.34	■■■□□ 2.77
CHTF18-209	ENST00000479976	PCDHA2	Q9Y5H9	948 aa		32.34	■■■□□ 2.77
CHTF18-209	ENST00000479976	MRPS6	P82932	125 aa	Known RBP	32.33	■■■□□ 2.77
CHTF18-209	ENST00000479976	FBXO47	Q5MNV8	452 aa		32.33	■■■□□ 2.77
CHTF18-209	ENST00000479976	IER5	Q5VY09	327 aa		32.33	■■■□□ 2.77
CHTF18-209	ENST00000479976	TRAPPC12	Q8WVT3	735 aa		32.33	■■■□□ 2.77
CHTF18-209	ENST00000479976	MUC3A	Q02505	3323 aa		32.33	■■■□□ 2.77
CHTF18-209	ENST00000479976	BACH1	O14867	736 aa		32.32	■■■□□ 2.76
CHTF18-209	ENST00000479976	SET	Q01105	290 aa	Predicted RBP	32.32	■■■□□ 2.76
CHTF18-209	ENST00000479976	FAM160B1	Q5W0V3	765 aa		32.32	■■■□□ 2.76
CHTF18-209	ENST00000479976	RASGRP4	Q8TDF6	673 aa		32.32	■■■□□ 2.76

Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms