RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 NRCAMQ92823 1304 aa12.2□□□□□ -0.46
ATG4B-219ENST00000479941 C17orf102A2RUQ5 167 aa12.2□□□□□ -0.46
ATG4B-219ENST00000479941 H0YGN5 161 aa12.2□□□□□ -0.46
ATG4B-219ENST00000479941 KIAA0355O15063 1070 aa12.2□□□□□ -0.46
ATG4B-219ENST00000479941 STX6O43752 255 aa12.2□□□□□ -0.46
ATG4B-219ENST00000479941 SMIM10L2AP0DMW4 78 aa12.2□□□□□ -0.46
ATG4B-219ENST00000479941 SMIM10L2BP0DMW5 78 aa12.2□□□□□ -0.46
ATG4B-219ENST00000479941 GNAT1P11488 350 aa12.2□□□□□ -0.46
ATG4B-219ENST00000479941 HOXC8P31273 242 aa12.2□□□□□ -0.46
ATG4B-219ENST00000479941 ZNF174Q15697 407 aa12.2□□□□□ -0.46
ATG4B-219ENST00000479941 PTGISQ16647 500 aa12.2□□□□□ -0.46
ATG4B-219ENST00000479941 GDF6Q6KF10 455 aaPredicted RBP12.2□□□□□ -0.46
ATG4B-219ENST00000479941 RNPEPQ9H4A4 650 aa12.2□□□□□ -0.46
ATG4B-219ENST00000479941 GABBR1Q9UBS5 961 aa12.2□□□□□ -0.46
ATG4B-219ENST00000479941 VAV3Q9UKW4 847 aa12.2□□□□□ -0.46
ATG4B-219ENST00000479941 TBX21Q9UL17 535 aa12.2□□□□□ -0.46
ATG4B-219ENST00000479941 ZMYND8Q9ULU4 1186 aaPredicted RBP12.2□□□□□ -0.46
ATG4B-219ENST00000479941 MAFBQ9Y5Q3 323 aaPredicted RBP12.2□□□□□ -0.46
ATG4B-219ENST00000479941 POTEB3A0JP26 581 aa12.19□□□□□ -0.46
ATG4B-219ENST00000479941 TRIM43BA6NCK2 446 aa12.19□□□□□ -0.46
ATG4B-219ENST00000479941 LAD1O00515 517 aa12.19□□□□□ -0.46
ATG4B-219ENST00000479941 OR52Z1P0C646 297 aa12.19□□□□□ -0.46
ATG4B-219ENST00000479941 RAG1P15918 1043 aa12.19□□□□□ -0.46
ATG4B-219ENST00000479941 SYN1P17600 705 aa12.19□□□□□ -0.46
ATG4B-219ENST00000479941 MARK3P27448 753 aa12.19□□□□□ -0.46
ATG4B-219ENST00000479941 TXKP42681 527 aa12.19□□□□□ -0.46
ATG4B-219ENST00000479941 PLCB4Q15147 1175 aa12.19□□□□□ -0.46
ATG4B-219ENST00000479941 PDXDC2PQ6P474 469 aa12.19□□□□□ -0.46
ATG4B-219ENST00000479941 POTEBQ6S5H4 581 aa12.19□□□□□ -0.46
ATG4B-219ENST00000479941 SH3RF1Q7Z6J0 888 aa12.19□□□□□ -0.46
ATG4B-219ENST00000479941 FERMT3Q86UX7 667 aa12.19□□□□□ -0.46
ATG4B-219ENST00000479941 PPP1R13LQ8WUF5 828 aa12.19□□□□□ -0.46
ATG4B-219ENST00000479941 ATP6V0A1Q93050 837 aa12.19□□□□□ -0.46
ATG4B-219ENST00000479941 TRIM43Q96BQ3 446 aaPredicted RBP12.19□□□□□ -0.46
ATG4B-219ENST00000479941 TMEM60Q9H2L4 133 aa12.19□□□□□ -0.46
ATG4B-219ENST00000479941 TTC12Q9H892 705 aaPredicted RBP12.19□□□□□ -0.46
ATG4B-219ENST00000479941 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.19□□□□□ -0.46
ATG4B-219ENST00000479941 TRPC6Q9Y210 931 aa12.19□□□□□ -0.46
ATG4B-219ENST00000479941 MTMR6Q9Y217 621 aa12.19□□□□□ -0.46
ATG4B-219ENST00000479941 PCDHB6Q9Y5E3 794 aa12.19□□□□□ -0.46
ATG4B-219ENST00000479941 IGSF9BQ9UPX0 1349 aa12.18□□□□□ -0.46
ATG4B-219ENST00000479941 RRN3P2A6NIE6 340 aa12.18□□□□□ -0.46
ATG4B-219ENST00000479941 HBP1O60381 514 aa12.18□□□□□ -0.46
ATG4B-219ENST00000479941 DKC1O60832 514 aaKnown RBP eCLIP12.18□□□□□ -0.46
ATG4B-219ENST00000479941 TIMP1P01033 207 aa12.18□□□□□ -0.46
ATG4B-219ENST00000479941 ADAM17P78536 824 aa12.18□□□□□ -0.46
ATG4B-219ENST00000479941 SPIRE1Q08AE8 756 aa12.18□□□□□ -0.46
ATG4B-219ENST00000479941 PPFIA1Q13136 1202 aa12.18□□□□□ -0.46
ATG4B-219ENST00000479941 PTK7Q13308 1070 aa12.18□□□□□ -0.46
ATG4B-219ENST00000479941 BFSP2Q13515 415 aa12.18□□□□□ -0.46
ATG4B-219ENST00000479941 NBR1Q14596 966 aa12.18□□□□□ -0.46
ATG4B-219ENST00000479941 EPHA7Q15375 998 aa12.18□□□□□ -0.46
ATG4B-219ENST00000479941 GRIK4Q16099 956 aa12.18□□□□□ -0.46
ATG4B-219ENST00000479941 PRPF38BQ5VTL8 546 aaKnown RBP12.18□□□□□ -0.46
ATG4B-219ENST00000479941 CKAP2LQ8IYA6 745 aa12.18□□□□□ -0.46
ATG4B-219ENST00000479941 CCDC155Q8N6L0 562 aa12.18□□□□□ -0.46
ATG4B-219ENST00000479941 C4orf32Q8N8J7 132 aa12.18□□□□□ -0.46
ATG4B-219ENST00000479941 SPRYD3Q8NCJ5 442 aa12.18□□□□□ -0.46
ATG4B-219ENST00000479941 CAGE1Q8TC20 777 aa12.18□□□□□ -0.46
ATG4B-219ENST00000479941 ATP8B4Q8TF62 1192 aa12.18□□□□□ -0.46
ATG4B-219ENST00000479941 BBXQ8WY36 941 aaPredicted RBP12.18□□□□□ -0.46
ATG4B-219ENST00000479941 FAM167AQ96KS9 214 aa12.18□□□□□ -0.46
ATG4B-219ENST00000479941 HIPK3Q9H422 1215 aa12.18□□□□□ -0.46
ATG4B-219ENST00000479941 ZSCAN16Q9H4T2 348 aaPredicted RBP12.18□□□□□ -0.46
ATG4B-219ENST00000479941 NRBP2Q9NSY0 501 aa12.18□□□□□ -0.46
ATG4B-219ENST00000479941 SETD4Q9NVD3 440 aa12.18□□□□□ -0.46
ATG4B-219ENST00000479941 EML1O00423 815 aa12.17□□□□□ -0.46
ATG4B-219ENST00000479941 PITPNM1O00562 1244 aa12.17□□□□□ -0.46
ATG4B-219ENST00000479941 P4HBP07237 508 aaKnown RBP12.17□□□□□ -0.46
ATG4B-219ENST00000479941 CYP2C9P11712 490 aa12.17□□□□□ -0.46
ATG4B-219ENST00000479941 INSRRP14616 1297 aa12.17□□□□□ -0.46
ATG4B-219ENST00000479941 ATP4AP20648 1035 aa12.17□□□□□ -0.46
ATG4B-219ENST00000479941 PSMC5P62195 406 aa12.17□□□□□ -0.46
ATG4B-219ENST00000479941 RESTQ13127 1097 aa12.17□□□□□ -0.46
ATG4B-219ENST00000479941 PTGDRQ13258 359 aa12.17□□□□□ -0.46
ATG4B-219ENST00000479941 HIC1Q14526 733 aa12.17□□□□□ -0.46
ATG4B-219ENST00000479941 TMEM266Q2M3C6 531 aa12.17□□□□□ -0.46
ATG4B-219ENST00000479941 ZNF484Q5JVG2 852 aa12.17□□□□□ -0.46
ATG4B-219ENST00000479941 NCAPH2Q6IBW4 605 aa12.17□□□□□ -0.46
ATG4B-219ENST00000479941 SERINC5Q86VE9 423 aa12.17□□□□□ -0.46
ATG4B-219ENST00000479941 LMBR1Q8WVP7 490 aa12.17□□□□□ -0.46
ATG4B-219ENST00000479941 CTAGE1Q96RT6 745 aa12.17□□□□□ -0.46
ATG4B-219ENST00000479941 LBHD1Q9BQE6 289 aaPredicted RBP12.17□□□□□ -0.46
ATG4B-219ENST00000479941 NOC4LQ9BVI4 516 aaKnown RBP12.17□□□□□ -0.46
ATG4B-219ENST00000479941 CEP131Q9UPN4 1083 aa12.17□□□□□ -0.46
ATG4B-219ENST00000479941 COL1A2P08123 1366 aa12.17□□□□□ -0.46
ATG4B-219ENST00000479941 MBLAC1A4D2B0 266 aaPredicted RBP12.16□□□□□ -0.46
ATG4B-219ENST00000479941 TREHO43280 583 aa12.16□□□□□ -0.46
ATG4B-219ENST00000479941 BMP15O95972 392 aa12.16□□□□□ -0.46
ATG4B-219ENST00000479941 OATP04181 439 aa12.16□□□□□ -0.46
ATG4B-219ENST00000479941 ITGB8P26012 769 aa12.16□□□□□ -0.46
ATG4B-219ENST00000479941 PRPHP41219 470 aa12.16□□□□□ -0.46
ATG4B-219ENST00000479941 TECP42680 631 aa12.16□□□□□ -0.46
ATG4B-219ENST00000479941 QARSP47897 775 aaKnown RBP12.16□□□□□ -0.46
ATG4B-219ENST00000479941 ZNF200P98182 395 aaPredicted RBP12.16□□□□□ -0.46
ATG4B-219ENST00000479941 PRKCEQ02156 737 aa12.16□□□□□ -0.46
ATG4B-219ENST00000479941 RBL2Q08999 1139 aa12.16□□□□□ -0.46
ATG4B-219ENST00000479941 PDIA5Q14554 519 aa12.16□□□□□ -0.46
ATG4B-219ENST00000479941 XKR3Q5GH77 459 aa12.16□□□□□ -0.46
ATG4B-219ENST00000479941 MFSD5Q6N075 450 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms