RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 PIK3AP1Q6ZUJ8 805 aa21.71■■□□□ 1.07
USP11-205ENST00000467378 IGLV3-22A0A075B6J6 115 aa21.7■■□□□ 1.06
USP11-205ENST00000467378 PRR33A8MZF0 331 aa21.7■■□□□ 1.06
USP11-205ENST00000467378 FAM86B1E9PN63 330 aa21.7■■□□□ 1.06
USP11-205ENST00000467378 ARHGEF15O94989 841 aa21.7■■□□□ 1.06
USP11-205ENST00000467378 FAM86B2P0C5J1 330 aa21.7■■□□□ 1.06
USP11-205ENST00000467378 SUPT20HL2P0C7V6 817 aa21.7■■□□□ 1.06
USP11-205ENST00000467378 ZNF76P36508 570 aa21.7■■□□□ 1.06
USP11-205ENST00000467378 MRE11P49959 708 aa21.7■■□□□ 1.06
USP11-205ENST00000467378 SAFBQ15424 915 aaKnown RBP eCLIP21.7■■□□□ 1.06
USP11-205ENST00000467378 INF2Q27J81 1249 aa21.7■■□□□ 1.06
USP11-205ENST00000467378 NIPA1Q7RTP0 329 aa21.7■■□□□ 1.06
USP11-205ENST00000467378 UIMC1Q96RL1 719 aa21.7■■□□□ 1.06
USP11-205ENST00000467378 FOXP1Q9H334 677 aaPredicted RBP21.7■■□□□ 1.06
USP11-205ENST00000467378 FOXD4L1Q9NU39 408 aa21.7■■□□□ 1.06
USP11-205ENST00000467378 TRIP12Q14669 1992 aaPredicted RBP21.69■■□□□ 1.06
USP11-205ENST00000467378 FAM205CA6NFA0 338 aa21.69■■□□□ 1.06
USP11-205ENST00000467378 ATP9AO75110 1047 aa21.69■■□□□ 1.06
USP11-205ENST00000467378 GH1P01241 217 aa21.69■■□□□ 1.06
USP11-205ENST00000467378 ARP10275 920 aa21.69■■□□□ 1.06
USP11-205ENST00000467378 ARHGAP1Q07960 439 aa21.69■■□□□ 1.06
USP11-205ENST00000467378 MTMR1Q13613 665 aa21.69■■□□□ 1.06
USP11-205ENST00000467378 LARP1BQ659C4 914 aaKnown RBP21.69■■□□□ 1.06
USP11-205ENST00000467378 TET1Q8NFU7 2136 aa21.69■■□□□ 1.06
USP11-205ENST00000467378 OR6J1Q8NGC5 347 aa21.69■■□□□ 1.06
USP11-205ENST00000467378 PHOSPHO2Q8TCD6 241 aa21.69■■□□□ 1.06
USP11-205ENST00000467378 CDHR1Q96JP9 859 aa21.69■■□□□ 1.06
USP11-205ENST00000467378 SENP7Q9BQF6 1050 aa21.69■■□□□ 1.06
USP11-205ENST00000467378 BCAS3Q9H6U6 928 aa21.69■■□□□ 1.06
USP11-205ENST00000467378 KCNH7Q9NS40 1196 aa21.69■■□□□ 1.06
USP11-205ENST00000467378 TRMT13Q9NUP7 481 aaKnown RBP21.69■■□□□ 1.06
USP11-205ENST00000467378 CYP3A7-CYP3A51PA0A087WV96 503 aa21.68■■□□□ 1.06
USP11-205ENST00000467378 UBA1P22314 1058 aaKnown RBP21.68■■□□□ 1.06
USP11-205ENST00000467378 CYP3A7P24462 503 aa21.68■■□□□ 1.06
USP11-205ENST00000467378 CELF3Q5SZQ8 465 aaKnown RBP21.68■■□□□ 1.06
USP11-205ENST00000467378 MYSM1Q5VVJ2 828 aa21.68■■□□□ 1.06
USP11-205ENST00000467378 HERC6Q8IVU3 1022 aa21.68■■□□□ 1.06
USP11-205ENST00000467378 DHX37Q8IY37 1157 aaKnown RBP21.68■■□□□ 1.06
USP11-205ENST00000467378 EMID1Q96A84 441 aaPredicted RBP21.68■■□□□ 1.06
USP11-205ENST00000467378 FTOQ9C0B1 505 aaKnown RBP eCLIP21.68■■□□□ 1.06
USP11-205ENST00000467378 GGPS1O95749 300 aa21.67■■□□□ 1.06
USP11-205ENST00000467378 KCNA2P16389 499 aa21.67■■□□□ 1.06
USP11-205ENST00000467378 U2AF2P26368 475 aaKnown RBP eCLIP21.67■■□□□ 1.06
USP11-205ENST00000467378 NEDD9Q14511 834 aa21.67■■□□□ 1.06
USP11-205ENST00000467378 MOXD1Q6UVY6 613 aa21.67■■□□□ 1.06
USP11-205ENST00000467378 NEK8Q86SG6 692 aa21.67■■□□□ 1.06
USP11-205ENST00000467378 PLA2G4DQ86XP0 818 aa21.67■■□□□ 1.06
USP11-205ENST00000467378 LENG9Q96B70 501 aa21.67■■□□□ 1.06
USP11-205ENST00000467378 MBOAT7Q96N66 472 aa21.67■■□□□ 1.06
USP11-205ENST00000467378 A6NJR5 290 aa21.66■■□□□ 1.06
USP11-205ENST00000467378 LPXNO60711 386 aa21.66■■□□□ 1.06
USP11-205ENST00000467378 RFC2P35250 354 aa21.66■■□□□ 1.06
USP11-205ENST00000467378 LAMC2Q13753 1193 aa21.66■■□□□ 1.06
USP11-205ENST00000467378 CSPP1Q1MSJ5 1256 aa21.66■■□□□ 1.06
USP11-205ENST00000467378 Q4G0T1 1027 aa21.66■■□□□ 1.06
USP11-205ENST00000467378 SPRED2Q7Z698 418 aa21.66■■□□□ 1.06
USP11-205ENST00000467378 AGO4Q9HCK5 861 aaKnown RBP21.66■■□□□ 1.06
USP11-205ENST00000467378 H3BQV1 296 aa21.65■■□□□ 1.06
USP11-205ENST00000467378 TDP2O95551 362 aa21.65■■□□□ 1.06
USP11-205ENST00000467378 SSTR3P32745 418 aaPredicted RBP21.65■■□□□ 1.06
USP11-205ENST00000467378 LETM2Q2VYF4 491 aa21.65■■□□□ 1.06
USP11-205ENST00000467378 PRR16Q569H4 304 aa21.65■■□□□ 1.06
USP11-205ENST00000467378 FAM47CQ5HY64 1035 aa21.65■■□□□ 1.06
USP11-205ENST00000467378 CYFIP1Q7L576 1253 aa21.65■■□□□ 1.06
USP11-205ENST00000467378 GJD3Q8N144 294 aa21.65■■□□□ 1.06
USP11-205ENST00000467378 GIMAP8Q8ND71 665 aaPredicted RBP21.65■■□□□ 1.06
USP11-205ENST00000467378 MLXIPQ9HAP2 919 aa21.65■■□□□ 1.06
USP11-205ENST00000467378 SORBS3O60504 671 aa21.64■■□□□ 1.05
USP11-205ENST00000467378 PDCP20941 246 aa21.64■■□□□ 1.05
USP11-205ENST00000467378 SYT1P21579 422 aa21.64■■□□□ 1.05
USP11-205ENST00000467378 CPT1AP50416 773 aa21.64■■□□□ 1.05
USP11-205ENST00000467378 SETQ01105 290 aaPredicted RBP21.64■■□□□ 1.05
USP11-205ENST00000467378 PPP4R3AQ6IN85 833 aa21.64■■□□□ 1.05
USP11-205ENST00000467378 METTL7BQ6UX53 244 aa21.64■■□□□ 1.05
USP11-205ENST00000467378 NOSTRINQ8IVI9 506 aa21.64■■□□□ 1.05
USP11-205ENST00000467378 FAM178BQ8IXR5 827 aa21.64■■□□□ 1.05
USP11-205ENST00000467378 RETREG2Q8NC44 543 aa21.64■■□□□ 1.05
USP11-205ENST00000467378 GDPD5Q8WTR4 605 aa21.64■■□□□ 1.05
USP11-205ENST00000467378 AFG1LQ8WV93 481 aa21.64■■□□□ 1.05
USP11-205ENST00000467378 POLR3EQ9NVU0 708 aa21.64■■□□□ 1.05
USP11-205ENST00000467378 PKD2L1Q9P0L9 805 aa21.64■■□□□ 1.05
USP11-205ENST00000467378 WDR81Q562E7 1941 aa21.64■■□□□ 1.05
USP11-205ENST00000467378 SIP14410 1827 aa21.64■■□□□ 1.05
USP11-205ENST00000467378 NFASCO94856 1347 aa21.63■■□□□ 1.05
USP11-205ENST00000467378 MYL3P08590 195 aa21.63■■□□□ 1.05
USP11-205ENST00000467378 ITGB3BPQ13352 177 aaPredicted RBP21.63■■□□□ 1.05
USP11-205ENST00000467378 GNL2Q13823 731 aaKnown RBP21.63■■□□□ 1.05
USP11-205ENST00000467378 HSDL1Q3SXM5 330 aa21.63■■□□□ 1.05
USP11-205ENST00000467378 PPTC7Q8NI37 304 aa21.63■■□□□ 1.05
USP11-205ENST00000467378 SNX27Q96L92 541 aa21.63■■□□□ 1.05
USP11-205ENST00000467378 NAP1L4Q99733 375 aaKnown RBP21.63■■□□□ 1.05
USP11-205ENST00000467378 UBE2ZQ9H832 354 aaPredicted RBP21.63■■□□□ 1.05
USP11-205ENST00000467378 TELO2Q9Y4R8 837 aa21.63■■□□□ 1.05
USP11-205ENST00000467378 SCN10AQ9Y5Y9 1956 aa21.63■■□□□ 1.05
USP11-205ENST00000467378 WNT7AO00755 349 aa21.62■■□□□ 1.05
USP11-205ENST00000467378 MSH4O15457 936 aa21.62■■□□□ 1.05
USP11-205ENST00000467378 DHX15O43143 795 aaKnown RBP21.62■■□□□ 1.05
USP11-205ENST00000467378 CCNT1O60563 726 aaKnown RBP21.62■■□□□ 1.05
USP11-205ENST00000467378 HSP90AA1P07900 732 aaKnown RBP21.62■■□□□ 1.05
USP11-205ENST00000467378 MMP3P08254 477 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms