RNA–Protein interactions for RNA: ENST00000464012.1

CCHCR1-210, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 2

Gene CCHCR1, Length 512 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-210ENST00000464012 RFXAPO00287 272 aa21.95■■□□□ 1.1
CCHCR1-210ENST00000464012 MEIS1O00470 390 aa21.95■■□□□ 1.1
CCHCR1-210ENST00000464012 EFCAB14O75071 495 aa21.95■■□□□ 1.1
CCHCR1-210ENST00000464012 CAND2O75155 1236 aa21.95■■□□□ 1.1
CCHCR1-210ENST00000464012 FAM86B2P0C5J1 330 aa21.95■■□□□ 1.1
CCHCR1-210ENST00000464012 GNA11P29992 359 aa21.95■■□□□ 1.1
CCHCR1-210ENST00000464012 EVCP57679 992 aa21.95■■□□□ 1.1
CCHCR1-210ENST00000464012 TAP1Q03518 808 aa21.95■■□□□ 1.1
CCHCR1-210ENST00000464012 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.95■■□□□ 1.1
CCHCR1-210ENST00000464012 SPRED2Q7Z698 418 aa21.95■■□□□ 1.1
CCHCR1-210ENST00000464012 CCDC148Q8NFR7 591 aa21.95■■□□□ 1.1
CCHCR1-210ENST00000464012 TRPC6Q9Y210 931 aa21.95■■□□□ 1.1
CCHCR1-210ENST00000464012 PLEKHG4Q58EX7 1191 aa21.94■■□□□ 1.1
CCHCR1-210ENST00000464012 MYOCDQ8IZQ8 938 aa21.94■■□□□ 1.1
CCHCR1-210ENST00000464012 ARNTL2Q8WYA1 636 aa21.94■■□□□ 1.1
CCHCR1-210ENST00000464012 SEPT8Q92599 483 aa21.94■■□□□ 1.1
CCHCR1-210ENST00000464012 ZBTB10Q96DT7 871 aa21.94■■□□□ 1.1
CCHCR1-210ENST00000464012 TM6SF1Q9BZW5 370 aa21.94■■□□□ 1.1
CCHCR1-210ENST00000464012 PRDM6Q9NQX0 595 aa21.94■■□□□ 1.1
CCHCR1-210ENST00000464012 PDRG1Q9NUG6 133 aa21.94■■□□□ 1.1
CCHCR1-210ENST00000464012 EPOPA6NHQ4 379 aa21.93■■□□□ 1.1
CCHCR1-210ENST00000464012 CPLX1O14810 134 aa21.93■■□□□ 1.1
CCHCR1-210ENST00000464012 NIPA1Q7RTP0 329 aa21.93■■□□□ 1.1
CCHCR1-210ENST00000464012 TRIM22Q8IYM9 498 aa21.93■■□□□ 1.1
CCHCR1-210ENST00000464012 CHD7Q9P2D1 2997 aa21.93■■□□□ 1.1
CCHCR1-210ENST00000464012 NLRC5Q86WI3 1866 aa21.92■■□□□ 1.1
CCHCR1-210ENST00000464012 UNC80Q8N2C7 3258 aa21.92■■□□□ 1.1
CCHCR1-210ENST00000464012 IGLV3-22A0A075B6J6 115 aa21.92■■□□□ 1.1
CCHCR1-210ENST00000464012 GJB5O95377 273 aa21.92■■□□□ 1.1
CCHCR1-210ENST00000464012 CCNE2O96020 404 aa21.92■■□□□ 1.1
CCHCR1-210ENST00000464012 AMHP03971 560 aa21.92■■□□□ 1.1
CCHCR1-210ENST00000464012 CYP3A4P08684 503 aa21.92■■□□□ 1.1
CCHCR1-210ENST00000464012 INSRRP14616 1297 aa21.92■■□□□ 1.1
CCHCR1-210ENST00000464012 NLRP5P59047 1200 aa21.92■■□□□ 1.1
CCHCR1-210ENST00000464012 SSRP1Q08945 709 aaKnown RBP21.92■■□□□ 1.1
CCHCR1-210ENST00000464012 ERICH6BQ5W0A0 696 aa21.92■■□□□ 1.1
CCHCR1-210ENST00000464012 MCTP2Q6DN12 878 aa21.92■■□□□ 1.1
CCHCR1-210ENST00000464012 TAF2Q6P1X5 1199 aa21.92■■□□□ 1.1
CCHCR1-210ENST00000464012 BICD2Q8TD16 824 aa21.92■■□□□ 1.1
CCHCR1-210ENST00000464012 TRAPPC12Q8WVT3 735 aa21.92■■□□□ 1.1
CCHCR1-210ENST00000464012 DNAJB3Q8WWF6 145 aa21.92■■□□□ 1.1
CCHCR1-210ENST00000464012 CRYGNQ8WXF5 182 aa21.92■■□□□ 1.1
CCHCR1-210ENST00000464012 EVPLQ92817 2033 aa21.91■■□□□ 1.1
CCHCR1-210ENST00000464012 BACH1O14867 736 aa21.91■■□□□ 1.1
CCHCR1-210ENST00000464012 GHRP10912 638 aa21.91■■□□□ 1.1
CCHCR1-210ENST00000464012 STAT5BP51692 787 aa21.91■■□□□ 1.1
CCHCR1-210ENST00000464012 PLCB4Q15147 1175 aa21.91■■□□□ 1.1
CCHCR1-210ENST00000464012 FAM26DQ5JW98 314 aa21.91■■□□□ 1.1
CCHCR1-210ENST00000464012 MARCH8Q5T0T0 291 aa21.91■■□□□ 1.1
CCHCR1-210ENST00000464012 RSPH3Q86UC2 560 aa21.91■■□□□ 1.1
CCHCR1-210ENST00000464012 ZNF274Q96GC6 653 aaPredicted RBP21.91■■□□□ 1.1
CCHCR1-210ENST00000464012 ZNF577Q9BSK1 485 aa21.91■■□□□ 1.1
CCHCR1-210ENST00000464012 IFIH1Q9BYX4 1025 aaKnown RBP21.91■■□□□ 1.1
CCHCR1-210ENST00000464012 FAM49AQ9H0Q0 323 aaPredicted RBP21.91■■□□□ 1.1
CCHCR1-210ENST00000464012 PRUNE2Q8WUY3 3088 aa21.91■■□□□ 1.1
CCHCR1-210ENST00000464012 MBLAC1A4D2B0 266 aaPredicted RBP21.9■■□□□ 1.1
CCHCR1-210ENST00000464012 IPO5O00410 1097 aaKnown RBP21.9■■□□□ 1.1
CCHCR1-210ENST00000464012 CHRNA1P02708 482 aa21.9■■□□□ 1.1
CCHCR1-210ENST00000464012 SETQ01105 290 aaPredicted RBP21.9■■□□□ 1.1
CCHCR1-210ENST00000464012 PRR16Q569H4 304 aa21.9■■□□□ 1.1
CCHCR1-210ENST00000464012 RAD9AQ99638 391 aa21.9■■□□□ 1.1
CCHCR1-210ENST00000464012 COL25A1Q9BXS0 654 aaPredicted RBP21.9■■□□□ 1.1
CCHCR1-210ENST00000464012 MTUS1Q9ULD2 1270 aa21.9■■□□□ 1.1
CCHCR1-210ENST00000464012 CDY2AQ9Y6F7 541 aa21.9■■□□□ 1.1
CCHCR1-210ENST00000464012 POTEB3A0JP26 581 aa21.89■■□□□ 1.09
CCHCR1-210ENST00000464012 RRN3P2A6NIE6 340 aa21.89■■□□□ 1.09
CCHCR1-210ENST00000464012 MGAT3Q09327 533 aa21.89■■□□□ 1.09
CCHCR1-210ENST00000464012 MKRN4PQ13434 485 aaPredicted RBP21.89■■□□□ 1.09
CCHCR1-210ENST00000464012 FAM160B1Q5W0V3 765 aa21.89■■□□□ 1.09
CCHCR1-210ENST00000464012 CPLX2Q6PUV4 134 aaKnown RBP21.89■■□□□ 1.09
CCHCR1-210ENST00000464012 POTEBQ6S5H4 581 aa21.89■■□□□ 1.09
CCHCR1-210ENST00000464012 PLPPR4Q7Z2D5 763 aa21.89■■□□□ 1.09
CCHCR1-210ENST00000464012 CCDC60Q8IWA6 550 aaPredicted RBP21.89■■□□□ 1.09
CCHCR1-210ENST00000464012 SH3GLB2Q9NR46 395 aa21.89■■□□□ 1.09
CCHCR1-210ENST00000464012 TCEAL9Q9UHQ7 104 aa21.89■■□□□ 1.09
CCHCR1-210ENST00000464012 DHX15O43143 795 aaKnown RBP21.88■■□□□ 1.09
CCHCR1-210ENST00000464012 GTPBP6O43824 516 aaPredicted RBP21.88■■□□□ 1.09
CCHCR1-210ENST00000464012 UPP2O95045 317 aa21.88■■□□□ 1.09
CCHCR1-210ENST00000464012 ATG7O95352 703 aa21.88■■□□□ 1.09
CCHCR1-210ENST00000464012 DEXIO95424 95 aa21.88■■□□□ 1.09
CCHCR1-210ENST00000464012 CENPBP07199 599 aaPredicted RBP21.88■■□□□ 1.09
CCHCR1-210ENST00000464012 KRT40Q6A162 431 aa21.88■■□□□ 1.09
CCHCR1-210ENST00000464012 ABHD15Q6UXT9 468 aa21.88■■□□□ 1.09
CCHCR1-210ENST00000464012 RPAINQ86UA6 219 aa21.88■■□□□ 1.09
CCHCR1-210ENST00000464012 GDPD5Q8WTR4 605 aa21.88■■□□□ 1.09
CCHCR1-210ENST00000464012 APBB2Q92870 758 aa21.88■■□□□ 1.09
CCHCR1-210ENST00000464012 TNPO1Q92973 898 aaKnown RBP21.88■■□□□ 1.09
CCHCR1-210ENST00000464012 AIFM3Q96NN9 605 aa21.88■■□□□ 1.09
CCHCR1-210ENST00000464012 ZNF302Q9NR11 478 aa21.88■■□□□ 1.09
CCHCR1-210ENST00000464012 MRPS6P82932 125 aaKnown RBP21.87■■□□□ 1.09
CCHCR1-210ENST00000464012 TMEM62Q0P6H9 643 aa21.87■■□□□ 1.09
CCHCR1-210ENST00000464012 MIS18BP1Q6P0N0 1132 aa21.87■■□□□ 1.09
CCHCR1-210ENST00000464012 PDXDC2PQ6P474 469 aa21.87■■□□□ 1.09
CCHCR1-210ENST00000464012 TRMT1LQ7Z2T5 733 aaKnown RBP21.87■■□□□ 1.09
CCHCR1-210ENST00000464012 RALGAPA2Q2PPJ7 1873 aa21.86■■□□□ 1.09
CCHCR1-210ENST00000464012 PRRC2BQ5JSZ5 2229 aaKnown RBP21.86■■□□□ 1.09
CCHCR1-210ENST00000464012 IGKV6D-21A0A0A0MT36 114 aa21.86■■□□□ 1.09
CCHCR1-210ENST00000464012 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.86■■□□□ 1.09
CCHCR1-210ENST00000464012 LINC01553A4QN01 128 aa21.86■■□□□ 1.09
CCHCR1-210ENST00000464012 DTNBO60941 627 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms