RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 TTC3P53804 2025 aa19.54■□□□□ 0.72
CPSF4-203ENST00000430038 FAM86B1E9PN63 330 aa19.54■□□□□ 0.72
CPSF4-203ENST00000430038 MAFGO15525 162 aa19.54■□□□□ 0.72
CPSF4-203ENST00000430038 EFCAB14O75071 495 aa19.54■□□□□ 0.72
CPSF4-203ENST00000430038 CAND2O75155 1236 aa19.54■□□□□ 0.72
CPSF4-203ENST00000430038 CCNE2O96020 404 aa19.54■□□□□ 0.72
CPSF4-203ENST00000430038 FAM86B2P0C5J1 330 aa19.54■□□□□ 0.72
CPSF4-203ENST00000430038 INSRRP14616 1297 aa19.54■□□□□ 0.72
CPSF4-203ENST00000430038 SREBF1P36956 1147 aa19.54■□□□□ 0.72
CPSF4-203ENST00000430038 LPIN1Q14693 890 aa19.54■□□□□ 0.72
CPSF4-203ENST00000430038 NTRK3Q16288 839 aa19.54■□□□□ 0.72
CPSF4-203ENST00000430038 PFKFB3Q16875 520 aaPredicted RBP19.54■□□□□ 0.72
CPSF4-203ENST00000430038 CEP55Q53EZ4 464 aa19.54■□□□□ 0.72
CPSF4-203ENST00000430038 JAKMIP3Q5VZ66 844 aa19.54■□□□□ 0.72
CPSF4-203ENST00000430038 PPP1R18Q6NYC8 613 aa19.54■□□□□ 0.72
CPSF4-203ENST00000430038 RPAINQ86UA6 219 aa19.54■□□□□ 0.72
CPSF4-203ENST00000430038 ADAMTS19Q8TE59 1207 aa19.54■□□□□ 0.72
CPSF4-203ENST00000430038 SEPT8Q92599 483 aa19.54■□□□□ 0.72
CPSF4-203ENST00000430038 GLG1Q92896 1179 aa19.54■□□□□ 0.72
CPSF4-203ENST00000430038 TGS1Q96RS0 853 aaKnown RBP19.54■□□□□ 0.72
CPSF4-203ENST00000430038 AGXT2Q9BYV1 514 aa19.54■□□□□ 0.72
CPSF4-203ENST00000430038 SMARCAD1Q9H4L7 1026 aa19.54■□□□□ 0.72
CPSF4-203ENST00000430038 JPH1Q9HDC5 661 aaPredicted RBP19.54■□□□□ 0.72
CPSF4-203ENST00000430038 ERAP1Q9NZ08 941 aa19.54■□□□□ 0.72
CPSF4-203ENST00000430038 SLC9A2Q9UBY0 812 aa19.54■□□□□ 0.72
CPSF4-203ENST00000430038 NAP1L2Q9ULW6 460 aaPredicted RBP19.54■□□□□ 0.72
CPSF4-203ENST00000430038 COL4A6Q14031 1691 aa19.53■□□□□ 0.72
CPSF4-203ENST00000430038 DHX15O43143 795 aaKnown RBP19.53■□□□□ 0.72
CPSF4-203ENST00000430038 UPP2O95045 317 aa19.53■□□□□ 0.72
CPSF4-203ENST00000430038 ATG7O95352 703 aa19.53■□□□□ 0.72
CPSF4-203ENST00000430038 AMHP03971 560 aa19.53■□□□□ 0.72
CPSF4-203ENST00000430038 GHRP10912 638 aa19.53■□□□□ 0.72
CPSF4-203ENST00000430038 ACTR2P61160 394 aa19.53■□□□□ 0.72
CPSF4-203ENST00000430038 IGBP1P78318 339 aa19.53■□□□□ 0.72
CPSF4-203ENST00000430038 PLCB4Q15147 1175 aa19.53■□□□□ 0.72
CPSF4-203ENST00000430038 PHKBQ93100 1093 aa19.53■□□□□ 0.72
CPSF4-203ENST00000430038 CCDC136Q96JN2 1154 aa19.53■□□□□ 0.72
CPSF4-203ENST00000430038 INSL6Q9Y581 213 aa19.53■□□□□ 0.72
CPSF4-203ENST00000430038 NFASCO94856 1347 aa19.52■□□□□ 0.72
CPSF4-203ENST00000430038 MYH9P35579 1960 aaKnown RBP19.52■□□□□ 0.72
CPSF4-203ENST00000430038 IGLV3-22A0A075B6J6 115 aa19.52■□□□□ 0.72
CPSF4-203ENST00000430038 GTPBP6O43824 516 aaPredicted RBP19.52■□□□□ 0.72
CPSF4-203ENST00000430038 FOSP01100 380 aaPredicted RBP19.52■□□□□ 0.72
CPSF4-203ENST00000430038 HMGB1P09429 215 aaKnown RBP19.52■□□□□ 0.72
CPSF4-203ENST00000430038 SCG2P13521 617 aa19.52■□□□□ 0.72
CPSF4-203ENST00000430038 RPS6KB1P23443 525 aa19.52■□□□□ 0.72
CPSF4-203ENST00000430038 METAP2P50579 478 aaKnown RBP eCLIP19.52■□□□□ 0.72
CPSF4-203ENST00000430038 RCAN1P53805 252 aa19.52■□□□□ 0.72
CPSF4-203ENST00000430038 SKIV2LQ15477 1246 aaKnown RBP19.52■□□□□ 0.72
CPSF4-203ENST00000430038 IFIH1Q9BYX4 1025 aaKnown RBP19.52■□□□□ 0.72
CPSF4-203ENST00000430038 AGO3Q9H9G7 860 aaKnown RBP19.52■□□□□ 0.72
CPSF4-203ENST00000430038 TUBE1Q9UJT0 475 aa19.52■□□□□ 0.72
CPSF4-203ENST00000430038 IGKV6D-21A0A0A0MT36 114 aa19.51■□□□□ 0.71
CPSF4-203ENST00000430038 TNFRSF10AO00220 468 aa19.51■□□□□ 0.71
CPSF4-203ENST00000430038 BLOC1S2Q6QNY1 142 aa19.51■□□□□ 0.71
CPSF4-203ENST00000430038 RTN4RL1Q86UN2 441 aaPredicted RBP19.51■□□□□ 0.71
CPSF4-203ENST00000430038 FBXL16Q8N461 479 aa19.51■□□□□ 0.71
CPSF4-203ENST00000430038 RASGRP4Q8TDF6 673 aa19.51■□□□□ 0.71
CPSF4-203ENST00000430038 ZMYND12Q9H0C1 365 aa19.51■□□□□ 0.71
CPSF4-203ENST00000430038 CDY2AQ9Y6F7 541 aa19.51■□□□□ 0.71
CPSF4-203ENST00000430038 NID2Q14112 1375 aa19.51■□□□□ 0.71
CPSF4-203ENST00000430038 hCG_1984214I3L0E3 225 aa19.5■□□□□ 0.71
CPSF4-203ENST00000430038 DDX39AO00148 427 aaKnown RBP19.5■□□□□ 0.71
CPSF4-203ENST00000430038 ENPP3O14638 875 aa19.5■□□□□ 0.71
CPSF4-203ENST00000430038 PRPF3O43395 683 aaKnown RBP19.5■□□□□ 0.71
CPSF4-203ENST00000430038 LINC00271P0C7V0 271 aa19.5■□□□□ 0.71
CPSF4-203ENST00000430038 ATP4AP20648 1035 aa19.5■□□□□ 0.71
CPSF4-203ENST00000430038 TMEM62Q0P6H9 643 aa19.5■□□□□ 0.71
CPSF4-203ENST00000430038 TOB2Q14106 344 aaPredicted RBP19.5■□□□□ 0.71
CPSF4-203ENST00000430038 FBXO47Q5MNV8 452 aa19.5■□□□□ 0.71
CPSF4-203ENST00000430038 ABHD15Q6UXT9 468 aa19.5■□□□□ 0.71
CPSF4-203ENST00000430038 ZNF713Q8N859 430 aaPredicted RBP19.5■□□□□ 0.71
CPSF4-203ENST00000430038 LINC01599Q8WXQ3 324 aa19.5■□□□□ 0.71
CPSF4-203ENST00000430038 LARP6Q9BRS8 491 aaKnown RBP19.5■□□□□ 0.71
CPSF4-203ENST00000430038 FAM49AQ9H0Q0 323 aaPredicted RBP19.5■□□□□ 0.71
CPSF4-203ENST00000430038 NCOA5Q9HCD5 579 aaKnown RBP19.5■□□□□ 0.71
CPSF4-203ENST00000430038 CYP3A4P08684 503 aa19.49■□□□□ 0.71
CPSF4-203ENST00000430038 PDIA3P30101 505 aaKnown RBP19.49■□□□□ 0.71
CPSF4-203ENST00000430038 STAT5BP51692 787 aa19.49■□□□□ 0.71
CPSF4-203ENST00000430038 CCT2P78371 535 aaKnown RBP19.49■□□□□ 0.71
CPSF4-203ENST00000430038 AP3B2Q13367 1082 aa19.49■□□□□ 0.71
CPSF4-203ENST00000430038 EPC2Q52LR7 807 aa19.49■□□□□ 0.71
CPSF4-203ENST00000430038 TAF2Q6P1X5 1199 aa19.49■□□□□ 0.71
CPSF4-203ENST00000430038 PLPPR4Q7Z2D5 763 aa19.49■□□□□ 0.71
CPSF4-203ENST00000430038 PLA2G4DQ86XP0 818 aa19.49■□□□□ 0.71
CPSF4-203ENST00000430038 CCDC60Q8IWA6 550 aaPredicted RBP19.49■□□□□ 0.71
CPSF4-203ENST00000430038 UHRF1Q96T88 793 aaPredicted RBP19.49■□□□□ 0.71
CPSF4-203ENST00000430038 SDF4Q9BRK5 362 aa19.49■□□□□ 0.71
CPSF4-203ENST00000430038 RALGAPA2Q2PPJ7 1873 aa19.48■□□□□ 0.71
CPSF4-203ENST00000430038 ESYT2A0FGR8 921 aa19.48■□□□□ 0.71
CPSF4-203ENST00000430038 ZBTB42B2RXF5 422 aa19.48■□□□□ 0.71
CPSF4-203ENST00000430038 CD52P31358 61 aa19.48■□□□□ 0.71
CPSF4-203ENST00000430038 EVCP57679 992 aa19.48■□□□□ 0.71
CPSF4-203ENST00000430038 FGD1P98174 961 aa19.48■□□□□ 0.71
CPSF4-203ENST00000430038 CRIPAKQ8N1N5 446 aa19.48■□□□□ 0.71
CPSF4-203ENST00000430038 FBXO22Q8NEZ5 403 aa19.48■□□□□ 0.71
CPSF4-203ENST00000430038 CDHR5Q9HBB8 845 aa19.48■□□□□ 0.71
CPSF4-203ENST00000430038 RC3H2Q9HBD1 1191 aaKnown RBP19.48■□□□□ 0.71
CPSF4-203ENST00000430038 LMCD1Q9NZU5 365 aa19.48■□□□□ 0.71
CPSF4-203ENST00000430038 KIAA1671Q9BY89 1806 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms