RNA–Protein interactions for RNA: ENST00000390497.1

TRAJ40-201, Transcript of T cell receptor alpha joining 40, humanhuman

APPRIS P1 BASIC

Gene TRAJ40, Length 61 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ40-201ENST00000390497 RAVER1Q8IY67 606 aaKnown RBP3.87□□□□□ -1.79
TRAJ40-201ENST00000390497 C1orf162Q8NEQ5 155 aaPredicted RBP3.87□□□□□ -1.79
TRAJ40-201ENST00000390497 LMBR1Q8WVP7 490 aa3.87□□□□□ -1.79
TRAJ40-201ENST00000390497 JPH3Q8WXH2 748 aaPredicted RBP3.87□□□□□ -1.79
TRAJ40-201ENST00000390497 MYLIPQ8WY64 445 aa3.87□□□□□ -1.79
TRAJ40-201ENST00000390497 MAML3Q96JK9 1138 aa3.87□□□□□ -1.79
TRAJ40-201ENST00000390497 NUP88Q99567 741 aaPredicted RBP3.87□□□□□ -1.79
TRAJ40-201ENST00000390497 SEMA6BQ9H3T3 888 aa3.87□□□□□ -1.79
TRAJ40-201ENST00000390497 RC3H2Q9HBD1 1191 aaKnown RBP3.87□□□□□ -1.79
TRAJ40-201ENST00000390497 NGRNQ9NPE2 291 aaKnown RBP3.87□□□□□ -1.79
TRAJ40-201ENST00000390497 RIC8BQ9NVN3 520 aa3.87□□□□□ -1.79
TRAJ40-201ENST00000390497 H2AFY2Q9P0M6 372 aaPredicted RBP3.87□□□□□ -1.79
TRAJ40-201ENST00000390497 MYOTQ9UBF9 498 aa3.87□□□□□ -1.79
TRAJ40-201ENST00000390497 ASH2LQ9UBL3 628 aa3.87□□□□□ -1.79
TRAJ40-201ENST00000390497 LUC7L2Q9Y383 392 aaKnown RBP3.87□□□□□ -1.79
TRAJ40-201ENST00000390497 ARID4BQ4LE39 1312 aaPredicted RBP3.87□□□□□ -1.79
TRAJ40-201ENST00000390497 NOTOA8MTQ0 251 aa3.86□□□□□ -1.79
TRAJ40-201ENST00000390497 SLC27A2O14975 620 aa3.86□□□□□ -1.79
TRAJ40-201ENST00000390497 FOXP2O15409 715 aa3.86□□□□□ -1.79
TRAJ40-201ENST00000390497 SCGB1D2O95969 90 aa3.86□□□□□ -1.79
TRAJ40-201ENST00000390497 MPOP05164 745 aa3.86□□□□□ -1.79
TRAJ40-201ENST00000390497 KRT18P05783 430 aaKnown RBP3.86□□□□□ -1.79
TRAJ40-201ENST00000390497 MTHFD2P13995 350 aa3.86□□□□□ -1.79
TRAJ40-201ENST00000390497 AFMP43652 599 aa3.86□□□□□ -1.79
TRAJ40-201ENST00000390497 SCAND1P57086 179 aa3.86□□□□□ -1.79
TRAJ40-201ENST00000390497 TUSC3Q13454 348 aa3.86□□□□□ -1.79
TRAJ40-201ENST00000390497 MLC1Q15049 377 aa3.86□□□□□ -1.79
TRAJ40-201ENST00000390497 MINDY4Q4G0A6 757 aa3.86□□□□□ -1.79
TRAJ40-201ENST00000390497 TMEM240Q5SV17 173 aa3.86□□□□□ -1.79
TRAJ40-201ENST00000390497 EFCAB2Q5VUJ9 269 aa3.86□□□□□ -1.79
TRAJ40-201ENST00000390497 TTLL7Q6ZT98 887 aa3.86□□□□□ -1.79
TRAJ40-201ENST00000390497 ESPNLQ6ZVH7 1005 aa3.86□□□□□ -1.79
TRAJ40-201ENST00000390497 MILR1Q7Z6M3 343 aa3.86□□□□□ -1.79
TRAJ40-201ENST00000390497 NLRX1Q86UT6 975 aa3.86□□□□□ -1.79
TRAJ40-201ENST00000390497 PHYKPLQ8IUZ5 450 aa3.86□□□□□ -1.79
TRAJ40-201ENST00000390497 CPA6Q8N4T0 437 aa3.86□□□□□ -1.79
TRAJ40-201ENST00000390497 FLCNQ8NFG4 579 aa3.86□□□□□ -1.79
TRAJ40-201ENST00000390497 TTLL11Q8NHH1 800 aa3.86□□□□□ -1.79
TRAJ40-201ENST00000390497 TTC8Q8TAM2 541 aa3.86□□□□□ -1.79
TRAJ40-201ENST00000390497 RSAD2Q8WXG1 361 aa3.86□□□□□ -1.79
TRAJ40-201ENST00000390497 CLEC4DQ8WXI8 215 aa3.86□□□□□ -1.79
TRAJ40-201ENST00000390497 C16orf92Q96LL3 132 aa3.86□□□□□ -1.79
TRAJ40-201ENST00000390497 ORAI2Q96SN7 254 aa3.86□□□□□ -1.79
TRAJ40-201ENST00000390497 VTA1Q9NP79 307 aa3.86□□□□□ -1.79
TRAJ40-201ENST00000390497 TOPORSQ9NS56 1045 aaPredicted RBP3.86□□□□□ -1.79
TRAJ40-201ENST00000390497 HSPBP1Q9NZL4 362 aa3.86□□□□□ -1.79
TRAJ40-201ENST00000390497 IP6K2Q9UHH9 426 aa3.86□□□□□ -1.79
TRAJ40-201ENST00000390497 ASB1Q9Y576 335 aa3.86□□□□□ -1.79
TRAJ40-201ENST00000390497 PCDHB4Q9Y5E5 795 aa3.86□□□□□ -1.79
TRAJ40-201ENST00000390497 TCRBV5S2A0A599 114 aa3.85□□□□□ -1.79
TRAJ40-201ENST00000390497 FAM90A27PA6NNH2 459 aa3.85□□□□□ -1.79
TRAJ40-201ENST00000390497 KIAA1324LA8MWY0 1029 aaPredicted RBP3.85□□□□□ -1.79
TRAJ40-201ENST00000390497 F8W031 263 aaPredicted RBP3.85□□□□□ -1.79
TRAJ40-201ENST00000390497 ABLIM1O14639 778 aa3.85□□□□□ -1.79
TRAJ40-201ENST00000390497 SGSM2O43147 1006 aa3.85□□□□□ -1.79
TRAJ40-201ENST00000390497 PLIN1O60240 522 aa3.85□□□□□ -1.79
TRAJ40-201ENST00000390497 PSPNO60542 156 aa3.85□□□□□ -1.79
TRAJ40-201ENST00000390497 C4BPAP04003 597 aaKnown RBP3.85□□□□□ -1.79
TRAJ40-201ENST00000390497 MSL3P1P0C860 447 aa3.85□□□□□ -1.79
TRAJ40-201ENST00000390497 ATF3P18847 181 aa3.85□□□□□ -1.79
TRAJ40-201ENST00000390497 AKAP5P24588 427 aa3.85□□□□□ -1.79
TRAJ40-201ENST00000390497 TACR1P25103 407 aa3.85□□□□□ -1.79
TRAJ40-201ENST00000390497 CD96P40200 585 aa3.85□□□□□ -1.79
TRAJ40-201ENST00000390497 GPR3P46089 330 aa3.85□□□□□ -1.79
TRAJ40-201ENST00000390497 CD97P48960 835 aa3.85□□□□□ -1.79
TRAJ40-201ENST00000390497 ERVFRD-1P60508 538 aa3.85□□□□□ -1.79
TRAJ40-201ENST00000390497 HDAC1Q13547 482 aaPredicted RBP3.85□□□□□ -1.79
TRAJ40-201ENST00000390497 PCBP2Q15366 365 aaKnown RBP eCLIP3.85□□□□□ -1.79
TRAJ40-201ENST00000390497 FSCN1Q16658 493 aaKnown RBP3.85□□□□□ -1.79
TRAJ40-201ENST00000390497 CPZQ66K79 652 aa3.85□□□□□ -1.79
TRAJ40-201ENST00000390497 CCDC146Q8IYE0 955 aa3.85□□□□□ -1.79
TRAJ40-201ENST00000390497 MAGEB6Q8N7X4 407 aa3.85□□□□□ -1.79
TRAJ40-201ENST00000390497 FBXO41Q8TF61 875 aa3.85□□□□□ -1.79
TRAJ40-201ENST00000390497 RAX2Q96IS3 184 aa3.85□□□□□ -1.79
TRAJ40-201ENST00000390497 PLCD4Q9BRC7 762 aa3.85□□□□□ -1.79
TRAJ40-201ENST00000390497 CD244Q9BZW8 370 aa3.85□□□□□ -1.79
TRAJ40-201ENST00000390497 ZMAT4Q9H898 229 aa3.85□□□□□ -1.79
TRAJ40-201ENST00000390497 PAK6Q9NQU5 681 aaPredicted RBP3.85□□□□□ -1.79
TRAJ40-201ENST00000390497 GPR160Q9UJ42 338 aa3.85□□□□□ -1.79
TRAJ40-201ENST00000390497 DBR1Q9UK59 544 aaKnown RBP3.85□□□□□ -1.79
TRAJ40-201ENST00000390497 RCAN3Q9UKA8 241 aa3.85□□□□□ -1.79
TRAJ40-201ENST00000390497 PALD1Q9ULE6 856 aa3.85□□□□□ -1.79
TRAJ40-201ENST00000390497 GOLGA6L22H0YM25 854 aa3.84□□□□□ -1.79
TRAJ40-201ENST00000390497 KCNK3O14649 394 aa3.84□□□□□ -1.79
TRAJ40-201ENST00000390497 ERC2O15083 957 aa3.84□□□□□ -1.79
TRAJ40-201ENST00000390497 KDM1AO60341 852 aa3.84□□□□□ -1.79
TRAJ40-201ENST00000390497 LTFP02788 710 aa3.84□□□□□ -1.79
TRAJ40-201ENST00000390497 MYL1P05976 194 aa3.84□□□□□ -1.79
TRAJ40-201ENST00000390497 DBHP09172 617 aa3.84□□□□□ -1.79
TRAJ40-201ENST00000390497 FURINP09958 794 aa3.84□□□□□ -1.79
TRAJ40-201ENST00000390497 FAHP16930 419 aa3.84□□□□□ -1.79
TRAJ40-201ENST00000390497 SPINK2P20155 84 aa3.84□□□□□ -1.79
TRAJ40-201ENST00000390497 ENPP1P22413 925 aa3.84□□□□□ -1.79
TRAJ40-201ENST00000390497 PTX3P26022 381 aaPredicted RBP3.84□□□□□ -1.79
TRAJ40-201ENST00000390497 GNALP38405 381 aa3.84□□□□□ -1.79
TRAJ40-201ENST00000390497 IARSP41252 1262 aaKnown RBP3.84□□□□□ -1.79
TRAJ40-201ENST00000390497 PLCL1Q15111 1095 aa3.84□□□□□ -1.79
TRAJ40-201ENST00000390497 LRRC41Q15345 812 aa3.84□□□□□ -1.79
TRAJ40-201ENST00000390497 ABCB5Q2M3G0 1257 aa3.84□□□□□ -1.79
TRAJ40-201ENST00000390497 PAN2Q504Q3 1202 aaKnown RBP3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms