RNA–Protein interactions for RNA: ENST00000373382.5

VPS26A-202, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene VPS26A, Length 3,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-202ENST00000373382 SNCBQ16143 134 aa19.4■□□□□ 0.7
VPS26A-202ENST00000373382 PPP4R3AQ6IN85 833 aa19.4■□□□□ 0.7
VPS26A-202ENST00000373382 MTMR9Q96QG7 549 aa19.4■□□□□ 0.7
VPS26A-202ENST00000373382 CTNND1O60716 968 aaKnown RBP19.4■□□□□ 0.7
VPS26A-202ENST00000373382 TBC1D9BQ66K14 1250 aa19.4■□□□□ 0.7
VPS26A-202ENST00000373382 CD302Q8IX05 232 aa19.4■□□□□ 0.7
VPS26A-202ENST00000373382 CCDC65Q8IXS2 484 aa19.4■□□□□ 0.7
VPS26A-202ENST00000373382 TEX11Q8IYF3 940 aa19.4■□□□□ 0.7
VPS26A-202ENST00000373382 SPZ1Q9BXG8 430 aa19.4■□□□□ 0.7
VPS26A-202ENST00000373382 GGT7Q9UJ14 662 aa19.4■□□□□ 0.7
VPS26A-202ENST00000373382 HDAC9Q9UKV0 1011 aa19.4■□□□□ 0.7
VPS26A-202ENST00000373382 PNMA2Q9UL42 364 aa19.4■□□□□ 0.7
VPS26A-202ENST00000373382 KCNQ2O43526 872 aa19.4■□□□□ 0.7
VPS26A-202ENST00000373382 LLGL1Q15334 1064 aa19.4■□□□□ 0.7
VPS26A-202ENST00000373382 GKAP1Q5VSY0 366 aaPredicted RBP19.4■□□□□ 0.7
VPS26A-202ENST00000373382 CYB5D1Q6P9G0 228 aa19.4■□□□□ 0.7
VPS26A-202ENST00000373382 LZTS2Q9BRK4 669 aa19.4■□□□□ 0.7
VPS26A-202ENST00000373382 SRP68Q9UHB9 627 aaKnown RBP19.4■□□□□ 0.7
VPS26A-202ENST00000373382 FGGP02679 453 aa19.39■□□□□ 0.69
VPS26A-202ENST00000373382 IFNAR2P48551 515 aa19.39■□□□□ 0.69
VPS26A-202ENST00000373382 ZNF211Q13398 564 aaPredicted RBP19.39■□□□□ 0.69
VPS26A-202ENST00000373382 PNMA8AQ86V59 439 aaPredicted RBP19.39■□□□□ 0.69
VPS26A-202ENST00000373382 PARP9Q8IXQ6 854 aa19.39■□□□□ 0.69
VPS26A-202ENST00000373382 DNAJC19Q96DA6 116 aa19.39■□□□□ 0.69
VPS26A-202ENST00000373382 CACNA1SQ13698 1873 aa19.39■□□□□ 0.69
VPS26A-202ENST00000373382 CLIC2O15247 247 aa19.39■□□□□ 0.69
VPS26A-202ENST00000373382 SLCO1A2P46721 670 aa19.39■□□□□ 0.69
VPS26A-202ENST00000373382 USP11P51784 963 aa19.39■□□□□ 0.69
VPS26A-202ENST00000373382 GSCP56915 257 aaPredicted RBP19.39■□□□□ 0.69
VPS26A-202ENST00000373382 MKRN4PQ13434 485 aaPredicted RBP19.39■□□□□ 0.69
VPS26A-202ENST00000373382 PPP1R7Q15435 360 aa19.39■□□□□ 0.69
VPS26A-202ENST00000373382 TAX1BP1Q86VP1 789 aa19.39■□□□□ 0.69
VPS26A-202ENST00000373382 PCDHB13Q9Y5F0 798 aa19.39■□□□□ 0.69
VPS26A-202ENST00000373382 RBAK-RBAKDNI3L0D1 243 aa19.38■□□□□ 0.69
VPS26A-202ENST00000373382 PLA2G4BP0C869 781 aa19.38■□□□□ 0.69
VPS26A-202ENST00000373382 ECHS1P30084 290 aa19.38■□□□□ 0.69
VPS26A-202ENST00000373382 CUL1Q13616 776 aa19.38■□□□□ 0.69
VPS26A-202ENST00000373382 EP400NLQ6ZTU2 488 aa19.38■□□□□ 0.69
VPS26A-202ENST00000373382 TRIM59Q8IWR1 403 aa19.38■□□□□ 0.69
VPS26A-202ENST00000373382 EDEM3Q9BZQ6 932 aa19.38■□□□□ 0.69
VPS26A-202ENST00000373382 UTP11Q9Y3A2 253 aaKnown RBP19.38■□□□□ 0.69
VPS26A-202ENST00000373382 TRAPPC3O43617 180 aa19.38■□□□□ 0.69
VPS26A-202ENST00000373382 PPP1R12BO60237 982 aaPredicted RBP19.38■□□□□ 0.69
VPS26A-202ENST00000373382 GFPT2O94808 682 aa19.38■□□□□ 0.69
VPS26A-202ENST00000373382 BTDP43251 543 aa19.38■□□□□ 0.69
VPS26A-202ENST00000373382 SF3B3Q15393 1217 aaKnown RBP19.38■□□□□ 0.69
VPS26A-202ENST00000373382 EXOC3L4Q17RC7 722 aa19.38■□□□□ 0.69
VPS26A-202ENST00000373382 MSL1Q68DK7 614 aa19.38■□□□□ 0.69
VPS26A-202ENST00000373382 HIBCHQ6NVY1 386 aaPredicted RBP19.38■□□□□ 0.69
VPS26A-202ENST00000373382 MARCH10Q8NA82 808 aaPredicted RBP19.38■□□□□ 0.69
VPS26A-202ENST00000373382 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.38■□□□□ 0.69
VPS26A-202ENST00000373382 ARMCX3Q9UH62 379 aaPredicted RBP19.38■□□□□ 0.69
VPS26A-202ENST00000373382 NAGPAQ9UK23 515 aa19.38■□□□□ 0.69
VPS26A-202ENST00000373382 NR2E1Q9Y466 385 aa19.38■□□□□ 0.69
VPS26A-202ENST00000373382 UCHL3P15374 230 aa19.38■□□□□ 0.69
VPS26A-202ENST00000373382 SCP2P22307 547 aa19.38■□□□□ 0.69
VPS26A-202ENST00000373382 NEDD9Q14511 834 aa19.38■□□□□ 0.69
VPS26A-202ENST00000373382 DDB1Q16531 1140 aa19.38■□□□□ 0.69
VPS26A-202ENST00000373382 PROM2Q8N271 834 aa19.38■□□□□ 0.69
VPS26A-202ENST00000373382 SCFD1Q8WVM8 642 aa19.38■□□□□ 0.69
VPS26A-202ENST00000373382 TCP11Q8WWU5 503 aa19.38■□□□□ 0.69
VPS26A-202ENST00000373382 LRRC27Q9C0I9 530 aa19.38■□□□□ 0.69
VPS26A-202ENST00000373382 KRT13P13646 458 aa19.37■□□□□ 0.69
VPS26A-202ENST00000373382 CASP5P51878 434 aa19.37■□□□□ 0.69
VPS26A-202ENST00000373382 PLTPP55058 493 aa19.37■□□□□ 0.69
VPS26A-202ENST00000373382 PABPC4Q13310 644 aaKnown RBP eCLIP19.37■□□□□ 0.691e-6■■□□□ 12.5
VPS26A-202ENST00000373382 FUKQ8N0W3 1084 aa19.37■□□□□ 0.69
VPS26A-202ENST00000373382 HVCN1Q96D96 273 aa19.37■□□□□ 0.69
VPS26A-202ENST00000373382 OSGEPQ9NPF4 335 aa19.37■□□□□ 0.69
VPS26A-202ENST00000373382 SLC12A6Q9UHW9 1150 aa19.37■□□□□ 0.69
VPS26A-202ENST00000373382 SUFUQ9UMX1 484 aa19.37■□□□□ 0.69
VPS26A-202ENST00000373382 PLCH1Q4KWH8 1693 aa19.37■□□□□ 0.69
VPS26A-202ENST00000373382 POTEFA5A3E0 1075 aa19.37■□□□□ 0.69
VPS26A-202ENST00000373382 POTEIP0CG38 1075 aa19.37■□□□□ 0.69
VPS26A-202ENST00000373382 FXR2P51116 673 aaKnown RBP eCLIP19.37■□□□□ 0.69
VPS26A-202ENST00000373382 PSMD2Q13200 908 aa19.37■□□□□ 0.69
VPS26A-202ENST00000373382 TTBK2Q6IQ55 1244 aa19.37■□□□□ 0.69
VPS26A-202ENST00000373382 POTEGQ6S5H5 508 aa19.37■□□□□ 0.69
VPS26A-202ENST00000373382 POTEEQ6S8J3 1075 aa19.37■□□□□ 0.69
VPS26A-202ENST00000373382 CCDC26Q8TAB7 109 aa19.37■□□□□ 0.69
VPS26A-202ENST00000373382 GLG1Q92896 1179 aa19.37■□□□□ 0.69
VPS26A-202ENST00000373382 ZNF287Q9HBT7 754 aa19.37■□□□□ 0.69
VPS26A-202ENST00000373382 PAPPAQ13219 1627 aa19.37■□□□□ 0.69
VPS26A-202ENST00000373382 SPDYE3A6NKU9 549 aa19.36■□□□□ 0.69
VPS26A-202ENST00000373382 H0YGN5 161 aa19.36■□□□□ 0.69
VPS26A-202ENST00000373382 CAND2O75155 1236 aa19.36■□□□□ 0.69
VPS26A-202ENST00000373382 CLTAP09496 248 aa19.36■□□□□ 0.69
VPS26A-202ENST00000373382 H2AFZP0C0S5 128 aa19.36■□□□□ 0.69
VPS26A-202ENST00000373382 SCTRP47872 440 aa19.36■□□□□ 0.69
VPS26A-202ENST00000373382 IFI16Q16666 785 aaKnown RBP19.36■□□□□ 0.69
VPS26A-202ENST00000373382 FAM133BQ5BKY9 247 aaKnown RBP19.36■□□□□ 0.69
VPS26A-202ENST00000373382 ANKRD20A8PQ5CZ79 823 aa19.36■□□□□ 0.69
VPS26A-202ENST00000373382 H2AFVQ71UI9 128 aa19.36■□□□□ 0.69
VPS26A-202ENST00000373382 YTHDF3Q7Z739 585 aaKnown RBP19.36■□□□□ 0.69
VPS26A-202ENST00000373382 PBKQ96KB5 322 aa19.36■□□□□ 0.69
VPS26A-202ENST00000373382 TPX2Q9ULW0 747 aaKnown RBP19.36■□□□□ 0.69
VPS26A-202ENST00000373382 BCS1LQ9Y276 419 aa19.36■□□□□ 0.69
VPS26A-202ENST00000373382 NFS1Q9Y697 457 aa19.36■□□□□ 0.69
VPS26A-202ENST00000373382 USP17L15C9J2P7 530 aa19.36■□□□□ 0.69
VPS26A-202ENST00000373382 USP17L13C9JLJ4 530 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms