RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 CCDC65Q8IXS2 484 aa19.07■□□□□ 0.64
PTP4A3-201ENST00000329397 IFT20Q8IY31 132 aa19.07■□□□□ 0.64
PTP4A3-201ENST00000329397 RNF10Q8N5U6 811 aaKnown RBP19.07■□□□□ 0.64
PTP4A3-201ENST00000329397 AJAP1Q9UKB5 411 aaPredicted RBP19.07■□□□□ 0.64
PTP4A3-201ENST00000329397 FAM169AQ9Y6X4 670 aa19.07■□□□□ 0.64
PTP4A3-201ENST00000329397 GAKO14976 1311 aa19.07■□□□□ 0.64
PTP4A3-201ENST00000329397 NHSQ6T4R5 1651 aa19.07■□□□□ 0.64
PTP4A3-201ENST00000329397 MEI1Q5TIA1 1274 aa19.07■□□□□ 0.64
PTP4A3-201ENST00000329397 ZNF571Q7Z3V5 609 aaPredicted RBP19.07■□□□□ 0.64
PTP4A3-201ENST00000329397 ZFPM1Q8IX07 1006 aa19.07■□□□□ 0.64
PTP4A3-201ENST00000329397 CERS5Q8N5B7 392 aa19.07■□□□□ 0.64
PTP4A3-201ENST00000329397 OR2W6PQ8NHA6 318 aa19.07■□□□□ 0.64
PTP4A3-201ENST00000329397 CAVIN3Q969G5 261 aa19.07■□□□□ 0.64
PTP4A3-201ENST00000329397 GANQ9H2C0 597 aa19.07■□□□□ 0.64
PTP4A3-201ENST00000329397 PCDHAC2Q9Y5I4 1007 aa19.07■□□□□ 0.64
PTP4A3-201ENST00000329397 CLSTN1O94985 981 aa19.06■□□□□ 0.64
PTP4A3-201ENST00000329397 NT5C2P49902 561 aa19.06■□□□□ 0.64
PTP4A3-201ENST00000329397 KCNA1Q09470 495 aa19.06■□□□□ 0.64
PTP4A3-201ENST00000329397 NFIAQ12857 509 aa19.06■□□□□ 0.64
PTP4A3-201ENST00000329397 HLTFQ14527 1009 aaKnown RBP eCLIP19.06■□□□□ 0.64
PTP4A3-201ENST00000329397 PIK3R5Q8WYR1 880 aa19.06■□□□□ 0.64
PTP4A3-201ENST00000329397 RNPC3Q96LT9 517 aaKnown RBP19.06■□□□□ 0.64
PTP4A3-201ENST00000329397 GDF3Q9NR23 364 aa19.06■□□□□ 0.64
PTP4A3-201ENST00000329397 SERPINB13Q9UIV8 391 aa19.06■□□□□ 0.64
PTP4A3-201ENST00000329397 EBAG9O00559 213 aa19.06■□□□□ 0.64
PTP4A3-201ENST00000329397 SHMT1P34896 483 aa19.06■□□□□ 0.64
PTP4A3-201ENST00000329397 MRPL12P52815 198 aaKnown RBP19.06■□□□□ 0.64
PTP4A3-201ENST00000329397 PRR16Q569H4 304 aa19.06■□□□□ 0.64
PTP4A3-201ENST00000329397 HDAC9Q9UKV0 1011 aa19.06■□□□□ 0.64
PTP4A3-201ENST00000329397 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.05■□□□□ 0.64
PTP4A3-201ENST00000329397 ZBTB5O15062 677 aa19.05■□□□□ 0.64
PTP4A3-201ENST00000329397 MYBP10242 640 aa19.05■□□□□ 0.64
PTP4A3-201ENST00000329397 QRICH1Q2TAL8 776 aa19.05■□□□□ 0.64
PTP4A3-201ENST00000329397 SPAG5Q96R06 1193 aa19.05■□□□□ 0.64
PTP4A3-201ENST00000329397 FAM107BQ9H098 131 aa19.05■□□□□ 0.64
PTP4A3-201ENST00000329397 ADAMTSL1Q8N6G6 1762 aa19.05■□□□□ 0.64
PTP4A3-201ENST00000329397 IGKV6D-41A0A0C4DH26 115 aa19.05■□□□□ 0.64
PTP4A3-201ENST00000329397 SFI1A8K8P3 1242 aa19.05■□□□□ 0.64
PTP4A3-201ENST00000329397 IRF6O14896 467 aa19.05■□□□□ 0.64
PTP4A3-201ENST00000329397 ATP2B4P23634 1241 aa19.05■□□□□ 0.64
PTP4A3-201ENST00000329397 CASP4P49662 377 aa19.05■□□□□ 0.64
PTP4A3-201ENST00000329397 TCP10Q12799 353 aa19.05■□□□□ 0.64
PTP4A3-201ENST00000329397 DOK7Q18PE1 504 aa19.05■□□□□ 0.64
PTP4A3-201ENST00000329397 MAATS1Q7Z4T9 603 aa19.05■□□□□ 0.64
PTP4A3-201ENST00000329397 SFR1Q86XK3 245 aa19.05■□□□□ 0.64
PTP4A3-201ENST00000329397 RBM46Q8TBY0 533 aaKnown RBP19.05■□□□□ 0.64
PTP4A3-201ENST00000329397 USP40Q9NVE5 1235 aa19.05■□□□□ 0.64
PTP4A3-201ENST00000329397 PCDHGC5Q9Y5F6 944 aa19.05■□□□□ 0.64
PTP4A3-201ENST00000329397 PCDHA1Q9Y5I3 950 aa19.05■□□□□ 0.64
PTP4A3-201ENST00000329397 SMCHD1A6NHR9 2005 aa19.05■□□□□ 0.64
PTP4A3-201ENST00000329397 hCG_1984214I3L0E3 225 aa19.04■□□□□ 0.64
PTP4A3-201ENST00000329397 NDUFAB1O14561 156 aa19.04■□□□□ 0.64
PTP4A3-201ENST00000329397 CLIC2O15247 247 aa19.04■□□□□ 0.64
PTP4A3-201ENST00000329397 CEP104O60308 925 aa19.04■□□□□ 0.64
PTP4A3-201ENST00000329397 HPDP32754 393 aaPredicted RBP19.04■□□□□ 0.64
PTP4A3-201ENST00000329397 USH1GQ495M9 461 aa19.04■□□□□ 0.64
PTP4A3-201ENST00000329397 IQCKQ8N0W5 287 aa19.04■□□□□ 0.64
PTP4A3-201ENST00000329397 ZNF713Q8N859 430 aaPredicted RBP19.04■□□□□ 0.64
PTP4A3-201ENST00000329397 LRRC27Q9C0I9 530 aa19.04■□□□□ 0.64
PTP4A3-201ENST00000329397 HOXD13P35453 343 aa19.04■□□□□ 0.64
PTP4A3-201ENST00000329397 PAK2Q13177 524 aa19.04■□□□□ 0.64
PTP4A3-201ENST00000329397 ALS2CLQ60I27 953 aa19.04■□□□□ 0.64
PTP4A3-201ENST00000329397 TADA2BQ86TJ2 420 aa19.04■□□□□ 0.64
PTP4A3-201ENST00000329397 CATSPER3Q86XQ3 398 aa19.04■□□□□ 0.64
PTP4A3-201ENST00000329397 EDEM3Q9BZQ6 932 aa19.04■□□□□ 0.64
PTP4A3-201ENST00000329397 DDX47Q9H0S4 455 aaKnown RBP19.04■□□□□ 0.64
PTP4A3-201ENST00000329397 LRRC4BQ9NT99 713 aa19.04■□□□□ 0.64
PTP4A3-201ENST00000329397 POLD1P28340 1107 aa19.04■□□□□ 0.64
PTP4A3-201ENST00000329397 SEC24CP53992 1094 aa19.04■□□□□ 0.64
PTP4A3-201ENST00000329397 ERVK-9P63128 1117 aa19.04■□□□□ 0.64
PTP4A3-201ENST00000329397 USP38Q8NB14 1042 aa19.04■□□□□ 0.64
PTP4A3-201ENST00000329397 KAT2BQ92831 832 aa19.04■□□□□ 0.64
PTP4A3-201ENST00000329397 CEP63Q96MT8 703 aa19.04■□□□□ 0.64
PTP4A3-201ENST00000329397 REEP2Q9BRK0 252 aa19.04■□□□□ 0.64
PTP4A3-201ENST00000329397 ANO3Q9BYT9 981 aa19.04■□□□□ 0.64
PTP4A3-201ENST00000329397 SHTN1A0MZ66 631 aa19.03■□□□□ 0.64
PTP4A3-201ENST00000329397 TMCO5BA8MYB1 307 aa19.03■□□□□ 0.64
PTP4A3-201ENST00000329397 CETN3O15182 167 aa19.03■□□□□ 0.64
PTP4A3-201ENST00000329397 UCHL3P15374 230 aa19.03■□□□□ 0.64
PTP4A3-201ENST00000329397 SLC12A3P55017 1021 aa19.03■□□□□ 0.64
PTP4A3-201ENST00000329397 IRF2BP2Q7Z5L9 587 aa19.03■□□□□ 0.64
PTP4A3-201ENST00000329397 CYP2W1Q8TAV3 490 aa19.03■□□□□ 0.64
PTP4A3-201ENST00000329397 PPM1EQ8WY54 764 aa19.03■□□□□ 0.64
PTP4A3-201ENST00000329397 NT5C3AQ9H0P0 336 aa19.03■□□□□ 0.64
PTP4A3-201ENST00000329397 DHX36Q9H2U1 1008 aaKnown RBP19.03■□□□□ 0.64
PTP4A3-201ENST00000329397 AKAP3O75969 853 aa19.03■□□□□ 0.64
PTP4A3-201ENST00000329397 CEP85LQ5SZL2 805 aa19.03■□□□□ 0.64
PTP4A3-201ENST00000329397 FAM163AQ96GL9 167 aaPredicted RBP19.03■□□□□ 0.64
PTP4A3-201ENST00000329397 TSKSQ9UJT2 592 aa19.03■□□□□ 0.64
PTP4A3-201ENST00000329397 SERPINB2P05120 415 aa19.02■□□□□ 0.64
PTP4A3-201ENST00000329397 ITGA4P13612 1032 aa19.02■□□□□ 0.64
PTP4A3-201ENST00000329397 RPS6KA1Q15418 735 aa19.02■□□□□ 0.64
PTP4A3-201ENST00000329397 C15orf52Q6ZUT6 534 aaKnown RBP19.02■□□□□ 0.64
PTP4A3-201ENST00000329397 BANK1Q8NDB2 785 aa19.02■□□□□ 0.64
PTP4A3-201ENST00000329397 TAF4BQ92750 862 aa19.02■□□□□ 0.64
PTP4A3-201ENST00000329397 NEUROG2Q9H2A3 272 aa19.02■□□□□ 0.64
PTP4A3-201ENST00000329397 LUC7LQ9NQ29 371 aaKnown RBP19.02■□□□□ 0.64
PTP4A3-201ENST00000329397 AIPL1Q9NZN9 384 aa19.02■□□□□ 0.64
PTP4A3-201ENST00000329397 PLAAQ9Y263 795 aa19.02■□□□□ 0.64
PTP4A3-201ENST00000329397 KDM3AQ9Y4C1 1321 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms