RNA–Protein interactions for RNA: ENST00000303731.8

TRAPPC1-201, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-201ENST00000303731 ASB2Q96Q27 587 aa19■□□□□ 0.63
TRAPPC1-201ENST00000303731 IFIH1Q9BYX4 1025 aaKnown RBP19■□□□□ 0.63
TRAPPC1-201ENST00000303731 ZMYND12Q9H0C1 365 aa19■□□□□ 0.63
TRAPPC1-201ENST00000303731 AGO4Q9HCK5 861 aaKnown RBP19■□□□□ 0.63
TRAPPC1-201ENST00000303731 COL4A4P53420 1690 aaPredicted RBP18.99■□□□□ 0.63
TRAPPC1-201ENST00000303731 COL4A6Q14031 1691 aa18.99■□□□□ 0.63
TRAPPC1-201ENST00000303731 LCHNA4D1U4 455 aa18.99■□□□□ 0.63
TRAPPC1-201ENST00000303731 LINC01553A4QN01 128 aa18.99■□□□□ 0.63
TRAPPC1-201ENST00000303731 PRPF3O43395 683 aaKnown RBP18.99■□□□□ 0.63
TRAPPC1-201ENST00000303731 ARHGEF15O94989 841 aa18.99■□□□□ 0.63
TRAPPC1-201ENST00000303731 NEFLP07196 543 aa18.99■□□□□ 0.63
TRAPPC1-201ENST00000303731 MARK3P27448 753 aa18.99■□□□□ 0.63
TRAPPC1-201ENST00000303731 ACTR2P61160 394 aa18.99■□□□□ 0.63
TRAPPC1-201ENST00000303731 ERVK-21P61565 698 aa18.99■□□□□ 0.63
TRAPPC1-201ENST00000303731 HTRA4P83105 476 aaPredicted RBP18.99■□□□□ 0.63
TRAPPC1-201ENST00000303731 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.99■□□□□ 0.63
TRAPPC1-201ENST00000303731 TMCO2Q7Z6W1 182 aaPredicted RBP18.99■□□□□ 0.63
TRAPPC1-201ENST00000303731 BICD2Q8TD16 824 aa18.99■□□□□ 0.63
TRAPPC1-201ENST00000303731 SAMD11Q96NU1 681 aa18.99■□□□□ 0.63
TRAPPC1-201ENST00000303731 PRDM6Q9NQX0 595 aa18.99■□□□□ 0.63
TRAPPC1-201ENST00000303731 COG5Q9UP83 839 aa18.99■□□□□ 0.63
TRAPPC1-201ENST00000303731 EPOPA6NHQ4 379 aa18.98■□□□□ 0.63
TRAPPC1-201ENST00000303731 RFXAPO00287 272 aa18.98■□□□□ 0.63
TRAPPC1-201ENST00000303731 CYP3A4P08684 503 aa18.98■□□□□ 0.63
TRAPPC1-201ENST00000303731 CPA1P15085 419 aa18.98■□□□□ 0.63
TRAPPC1-201ENST00000303731 STAT5BP51692 787 aa18.98■□□□□ 0.63
TRAPPC1-201ENST00000303731 EVCP57679 992 aa18.98■□□□□ 0.63
TRAPPC1-201ENST00000303731 SETQ01105 290 aaPredicted RBP18.98■□□□□ 0.63
TRAPPC1-201ENST00000303731 GRB10Q13322 594 aa18.98■□□□□ 0.63
TRAPPC1-201ENST00000303731 FAM43BQ6ZT52 329 aaPredicted RBP18.98■□□□□ 0.63
TRAPPC1-201ENST00000303731 REXO1Q8N1G1 1221 aaKnown RBP18.98■□□□□ 0.63
TRAPPC1-201ENST00000303731 CCDC148Q8NFR7 591 aa18.98■□□□□ 0.63
TRAPPC1-201ENST00000303731 CYP2W1Q8TAV3 490 aa18.98■□□□□ 0.63
TRAPPC1-201ENST00000303731 SP7Q8TDD2 431 aaPredicted RBP18.98■□□□□ 0.63
TRAPPC1-201ENST00000303731 TOP1MTQ969P6 601 aa18.98■□□□□ 0.63
TRAPPC1-201ENST00000303731 PGBD1Q96JS3 809 aa18.98■□□□□ 0.63
TRAPPC1-201ENST00000303731 RNF26Q9BY78 433 aaPredicted RBP18.98■□□□□ 0.63
TRAPPC1-201ENST00000303731 TRPC6Q9Y210 931 aa18.98■□□□□ 0.63
TRAPPC1-201ENST00000303731 MUC3AQ02505 3323 aa18.98■□□□□ 0.63
TRAPPC1-201ENST00000303731 ATG7O95352 703 aa18.97■□□□□ 0.63
TRAPPC1-201ENST00000303731 CHRNA1P02708 482 aa18.97■□□□□ 0.63
TRAPPC1-201ENST00000303731 ARP10275 920 aa18.97■□□□□ 0.63
TRAPPC1-201ENST00000303731 SKIV2LQ15477 1246 aaKnown RBP18.97■□□□□ 0.63
TRAPPC1-201ENST00000303731 MARCH8Q5T0T0 291 aa18.97■□□□□ 0.63
TRAPPC1-201ENST00000303731 IER5Q5VY09 327 aa18.97■□□□□ 0.63
TRAPPC1-201ENST00000303731 FAM117BQ6P1L5 589 aa18.97■□□□□ 0.63
TRAPPC1-201ENST00000303731 RUFY4Q6ZNE9 571 aa18.97■□□□□ 0.63
TRAPPC1-201ENST00000303731 TMEM260Q9NX78 707 aa18.97■□□□□ 0.63
TRAPPC1-201ENST00000303731 SQORQ9Y6N5 450 aa18.97■□□□□ 0.63
TRAPPC1-201ENST00000303731 M0QZ92 97 aa18.96■□□□□ 0.63
TRAPPC1-201ENST00000303731 LPXNO60711 386 aa18.96■□□□□ 0.63
TRAPPC1-201ENST00000303731 INSRRP14616 1297 aa18.96■□□□□ 0.63
TRAPPC1-201ENST00000303731 IFNAR1P17181 557 aa18.96■□□□□ 0.63
TRAPPC1-201ENST00000303731 MGAT3Q09327 533 aa18.96■□□□□ 0.63
TRAPPC1-201ENST00000303731 ITGB3BPQ13352 177 aaPredicted RBP18.96■□□□□ 0.63
TRAPPC1-201ENST00000303731 JAKMIP3Q5VZ66 844 aa18.96■□□□□ 0.63
TRAPPC1-201ENST00000303731 FAM160B1Q5W0V3 765 aa18.96■□□□□ 0.63
TRAPPC1-201ENST00000303731 RUFY3Q7L099 469 aa18.96■□□□□ 0.63
TRAPPC1-201ENST00000303731 PLA2G4DQ86XP0 818 aa18.96■□□□□ 0.63
TRAPPC1-201ENST00000303731 CRYGNQ8WXF5 182 aa18.96■□□□□ 0.63
TRAPPC1-201ENST00000303731 YME1L1Q96TA2 773 aa18.96■□□□□ 0.63
TRAPPC1-201ENST00000303731 PCYT2Q99447 389 aa18.96■□□□□ 0.63
TRAPPC1-201ENST00000303731 TBC1D22BQ9NU19 505 aa18.96■□□□□ 0.63
TRAPPC1-201ENST00000303731 TCEAL9Q9UHQ7 104 aa18.96■□□□□ 0.63
TRAPPC1-201ENST00000303731 XIRP2A4UGR9 3374 aa18.95■□□□□ 0.62
TRAPPC1-201ENST00000303731 IGKV6D-21A0A0A0MT36 114 aa18.95■□□□□ 0.62
TRAPPC1-201ENST00000303731 POTEB3A0JP26 581 aa18.95■□□□□ 0.62
TRAPPC1-201ENST00000303731 MRPS6P82932 125 aaKnown RBP18.95■□□□□ 0.62
TRAPPC1-201ENST00000303731 PLCB4Q15147 1175 aa18.95■□□□□ 0.62
TRAPPC1-201ENST00000303731 PKN1Q16512 942 aa18.95■□□□□ 0.62
TRAPPC1-201ENST00000303731 POTEBQ6S5H4 581 aa18.95■□□□□ 0.62
TRAPPC1-201ENST00000303731 TSHZ1Q6ZSZ6 1077 aa18.95■□□□□ 0.62
TRAPPC1-201ENST00000303731 DNAJB3Q8WWF6 145 aa18.95■□□□□ 0.62
TRAPPC1-201ENST00000303731 SUGCTQ9HAC7 445 aa18.95■□□□□ 0.62
TRAPPC1-201ENST00000303731 ZSWIM6Q9HCJ5 1215 aa18.95■□□□□ 0.62
TRAPPC1-201ENST00000303731 SH3GLB2Q9NR46 395 aa18.95■□□□□ 0.62
TRAPPC1-201ENST00000303731 PCDHA2Q9Y5H9 948 aa18.95■□□□□ 0.62
TRAPPC1-201ENST00000303731 CYP46A1Q9Y6A2 500 aa18.95■□□□□ 0.62
TRAPPC1-201ENST00000303731 REV3LO60673 3130 aa18.95■□□□□ 0.62
TRAPPC1-201ENST00000303731 IGLV3-22A0A075B6J6 115 aa18.94■□□□□ 0.62
TRAPPC1-201ENST00000303731 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.94■□□□□ 0.62
TRAPPC1-201ENST00000303731 FAM86B1E9PN63 330 aa18.94■□□□□ 0.62
TRAPPC1-201ENST00000303731 IPO5O00410 1097 aaKnown RBP18.94■□□□□ 0.62
TRAPPC1-201ENST00000303731 FAM86B2P0C5J1 330 aa18.94■□□□□ 0.62
TRAPPC1-201ENST00000303731 GHRP10912 638 aa18.94■□□□□ 0.62
TRAPPC1-201ENST00000303731 PDIA3P30101 505 aaKnown RBP18.94■□□□□ 0.62
TRAPPC1-201ENST00000303731 IGBP1P78318 339 aa18.94■□□□□ 0.62
TRAPPC1-201ENST00000303731 LPIN1Q14693 890 aa18.94■□□□□ 0.62
TRAPPC1-201ENST00000303731 NTRK3Q16288 839 aa18.94■□□□□ 0.62
TRAPPC1-201ENST00000303731 FBXO47Q5MNV8 452 aa18.94■□□□□ 0.62
TRAPPC1-201ENST00000303731 MIS18BP1Q6P0N0 1132 aa18.94■□□□□ 0.62
TRAPPC1-201ENST00000303731 TRIM22Q8IYM9 498 aa18.94■□□□□ 0.62
TRAPPC1-201ENST00000303731 NME8Q8N427 588 aa18.94■□□□□ 0.62
TRAPPC1-201ENST00000303731 FBXO22Q8NEZ5 403 aa18.94■□□□□ 0.62
TRAPPC1-201ENST00000303731 GDPD5Q8WTR4 605 aa18.94■□□□□ 0.62
TRAPPC1-201ENST00000303731 FTHL17Q9BXU8 183 aa18.94■□□□□ 0.62
TRAPPC1-201ENST00000303731 TM6SF1Q9BZW5 370 aa18.94■□□□□ 0.62
TRAPPC1-201ENST00000303731 MTUS1Q9ULD2 1270 aa18.94■□□□□ 0.62
TRAPPC1-201ENST00000303731 CDY2AQ9Y6F7 541 aa18.94■□□□□ 0.62
TRAPPC1-201ENST00000303731 RALGAPA2Q2PPJ7 1873 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms