RNA–Protein interactions for RNA: ENST00000301599.6

TMEM88-201, Transcript of transmembrane protein 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM88, Length 875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-201ENST00000301599 TM6SF1Q9BZW5 370 aa20.78■□□□□ 0.92
TMEM88-201ENST00000301599 TSPYL2Q9H2G4 693 aaPredicted RBP20.78■□□□□ 0.92
TMEM88-201ENST00000301599 PPP4R2Q9NY27 417 aa20.78■□□□□ 0.92
TMEM88-201ENST00000301599 MBLAC1A4D2B0 266 aaPredicted RBP20.77■□□□□ 0.92
TMEM88-201ENST00000301599 ARHGEF15O94989 841 aa20.77■□□□□ 0.92
TMEM88-201ENST00000301599 ATG7O95352 703 aa20.77■□□□□ 0.92
TMEM88-201ENST00000301599 INSRRP14616 1297 aa20.77■□□□□ 0.92
TMEM88-201ENST00000301599 CCT2P78371 535 aaKnown RBP20.77■□□□□ 0.92
TMEM88-201ENST00000301599 ITGB3BPQ13352 177 aaPredicted RBP20.77■□□□□ 0.92
TMEM88-201ENST00000301599 FAM117BQ6P1L5 589 aa20.77■□□□□ 0.92
TMEM88-201ENST00000301599 REXO1Q8N1G1 1221 aaKnown RBP20.77■□□□□ 0.92
TMEM88-201ENST00000301599 SLC26A6Q9BXS9 759 aa20.77■□□□□ 0.92
TMEM88-201ENST00000301599 TUBE1Q9UJT0 475 aa20.77■□□□□ 0.92
TMEM88-201ENST00000301599 INSL6Q9Y581 213 aa20.77■□□□□ 0.92
TMEM88-201ENST00000301599 UNC80Q8N2C7 3258 aa20.76■□□□□ 0.91
TMEM88-201ENST00000301599 LCHNA4D1U4 455 aa20.76■□□□□ 0.91
TMEM88-201ENST00000301599 CHRNA1P02708 482 aa20.76■□□□□ 0.91
TMEM88-201ENST00000301599 RPLP2P05387 115 aaKnown RBP20.76■□□□□ 0.91
TMEM88-201ENST00000301599 IGBP1P78318 339 aa20.76■□□□□ 0.91
TMEM88-201ENST00000301599 MKRN4PQ13434 485 aaPredicted RBP20.76■□□□□ 0.91
TMEM88-201ENST00000301599 MARCH8Q5T0T0 291 aa20.76■□□□□ 0.91
TMEM88-201ENST00000301599 RUFY4Q6ZNE9 571 aa20.76■□□□□ 0.91
TMEM88-201ENST00000301599 MYOCDQ8IZQ8 938 aa20.76■□□□□ 0.91
TMEM88-201ENST00000301599 CCDC148Q8NFR7 591 aa20.76■□□□□ 0.91
TMEM88-201ENST00000301599 ATXN2LQ8WWM7 1075 aaKnown RBP20.76■□□□□ 0.91
TMEM88-201ENST00000301599 CRYGNQ8WXF5 182 aa20.76■□□□□ 0.91
TMEM88-201ENST00000301599 ZNF274Q96GC6 653 aaPredicted RBP20.76■□□□□ 0.91
TMEM88-201ENST00000301599 OSBPL7Q9BZF2 842 aa20.76■□□□□ 0.91
TMEM88-201ENST00000301599 PRDM6Q9NQX0 595 aa20.76■□□□□ 0.91
TMEM88-201ENST00000301599 TRPC6Q9Y210 931 aa20.76■□□□□ 0.91
TMEM88-201ENST00000301599 MTCH2Q9Y6C9 303 aa20.76■□□□□ 0.91
TMEM88-201ENST00000301599 KAT6AQ92794 2004 aa20.75■□□□□ 0.91
TMEM88-201ENST00000301599 FAM86B1E9PN63 330 aa20.75■□□□□ 0.91
TMEM88-201ENST00000301599 FAM86B2P0C5J1 330 aa20.75■□□□□ 0.91
TMEM88-201ENST00000301599 SLC26A2P50443 739 aa20.75■□□□□ 0.91
TMEM88-201ENST00000301599 TOB2Q14106 344 aaPredicted RBP20.75■□□□□ 0.91
TMEM88-201ENST00000301599 PLCB4Q15147 1175 aa20.75■□□□□ 0.91
TMEM88-201ENST00000301599 MICALL1Q8N3F8 863 aa20.75■□□□□ 0.91
TMEM88-201ENST00000301599 DNAJB3Q8WWF6 145 aa20.75■□□□□ 0.91
TMEM88-201ENST00000301599 TGS1Q96RS0 853 aaKnown RBP20.75■□□□□ 0.91
TMEM88-201ENST00000301599 NCOA5Q9HCD5 579 aaKnown RBP20.75■□□□□ 0.91
TMEM88-201ENST00000301599 SH3GLB2Q9NR46 395 aa20.75■□□□□ 0.91
TMEM88-201ENST00000301599 EPOPA6NHQ4 379 aa20.74■□□□□ 0.91
TMEM88-201ENST00000301599 IPO5O00410 1097 aaKnown RBP20.74■□□□□ 0.91
TMEM88-201ENST00000301599 PPFIA3O75145 1194 aa20.74■□□□□ 0.91
TMEM88-201ENST00000301599 ERVK-21P61565 698 aa20.74■□□□□ 0.91
TMEM88-201ENST00000301599 SSRP1Q08945 709 aaKnown RBP20.74■□□□□ 0.91
TMEM88-201ENST00000301599 TJAP1Q5JTD0 557 aa20.74■□□□□ 0.91
TMEM88-201ENST00000301599 FAM160B1Q5W0V3 765 aa20.74■□□□□ 0.91
TMEM88-201ENST00000301599 ABHD15Q6UXT9 468 aa20.74■□□□□ 0.91
TMEM88-201ENST00000301599 TRIM22Q8IYM9 498 aa20.74■□□□□ 0.91
TMEM88-201ENST00000301599 TOP1MTQ969P6 601 aa20.74■□□□□ 0.91
TMEM88-201ENST00000301599 IFIH1Q9BYX4 1025 aaKnown RBP20.74■□□□□ 0.91
TMEM88-201ENST00000301599 TBC1D22BQ9NU19 505 aa20.74■□□□□ 0.91
TMEM88-201ENST00000301599 THEGQ9P2T0 379 aa20.74■□□□□ 0.91
TMEM88-201ENST00000301599 EYSQ5T1H1 3165 aa20.74■□□□□ 0.91
TMEM88-201ENST00000301599 CUL9Q8IWT3 2517 aa20.73■□□□□ 0.91
TMEM88-201ENST00000301599 IGLV3-22A0A075B6J6 115 aa20.73■□□□□ 0.91
TMEM88-201ENST00000301599 IGKV6D-21A0A0A0MT36 114 aa20.73■□□□□ 0.91
TMEM88-201ENST00000301599 POTEB3A0JP26 581 aa20.73■□□□□ 0.91
TMEM88-201ENST00000301599 DDX39AO00148 427 aaKnown RBP20.73■□□□□ 0.91
TMEM88-201ENST00000301599 ADAMTS3O15072 1205 aa20.73■□□□□ 0.91
TMEM88-201ENST00000301599 DHX15O43143 795 aaKnown RBP20.73■□□□□ 0.91
TMEM88-201ENST00000301599 HTRA4P83105 476 aaPredicted RBP20.73■□□□□ 0.91
TMEM88-201ENST00000301599 GRB10Q13322 594 aa20.73■□□□□ 0.91
TMEM88-201ENST00000301599 IER5Q5VY09 327 aa20.73■□□□□ 0.91
TMEM88-201ENST00000301599 MIS18BP1Q6P0N0 1132 aa20.73■□□□□ 0.91
TMEM88-201ENST00000301599 POTEBQ6S5H4 581 aa20.73■□□□□ 0.91
TMEM88-201ENST00000301599 ZNF577Q9BSK1 485 aa20.73■□□□□ 0.91
TMEM88-201ENST00000301599 LMCD1Q9NZU5 365 aa20.73■□□□□ 0.91
TMEM88-201ENST00000301599 PCDHA2Q9Y5H9 948 aa20.73■□□□□ 0.91
TMEM88-201ENST00000301599 PRUNE2Q8WUY3 3088 aa20.73■□□□□ 0.91
TMEM88-201ENST00000301599 LINC01553A4QN01 128 aa20.72■□□□□ 0.91
TMEM88-201ENST00000301599 CPLX1O14810 134 aa20.72■□□□□ 0.91
TMEM88-201ENST00000301599 BACH1O14867 736 aa20.72■□□□□ 0.91
TMEM88-201ENST00000301599 CCNE2O96020 404 aa20.72■□□□□ 0.91
TMEM88-201ENST00000301599 NLRP5P59047 1200 aa20.72■□□□□ 0.91
TMEM88-201ENST00000301599 MRPS5P82675 430 aaKnown RBP20.72■□□□□ 0.91
TMEM88-201ENST00000301599 SETQ01105 290 aaPredicted RBP20.72■□□□□ 0.91
TMEM88-201ENST00000301599 MGAT3Q09327 533 aa20.72■□□□□ 0.91
TMEM88-201ENST00000301599 CPLX2Q6PUV4 134 aaKnown RBP20.72■□□□□ 0.91
TMEM88-201ENST00000301599 PDRG1Q9NUG6 133 aa20.72■□□□□ 0.91
TMEM88-201ENST00000301599 VPS54Q9P1Q0 977 aa20.72■□□□□ 0.91
TMEM88-201ENST00000301599 CHD7Q9P2D1 2997 aa20.72■□□□□ 0.91
TMEM88-201ENST00000301599 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.71■□□□□ 0.91
TMEM88-201ENST00000301599 RBAK-RBAKDNI3L0D1 243 aa20.71■□□□□ 0.91
TMEM88-201ENST00000301599 HBP1O60381 514 aa20.71■□□□□ 0.91
TMEM88-201ENST00000301599 UPP2O95045 317 aa20.71■□□□□ 0.91
TMEM88-201ENST00000301599 GHRP10912 638 aa20.71■□□□□ 0.91
TMEM88-201ENST00000301599 CIITAP33076 1130 aa20.71■□□□□ 0.91
TMEM88-201ENST00000301599 USP11P51784 963 aa20.71■□□□□ 0.91
TMEM88-201ENST00000301599 MRPS6P82932 125 aaKnown RBP20.71■□□□□ 0.91
TMEM88-201ENST00000301599 LPIN1Q14693 890 aa20.71■□□□□ 0.91
TMEM88-201ENST00000301599 SWSAP1Q6NVH7 229 aa20.71■□□□□ 0.91
TMEM88-201ENST00000301599 SPRED2Q7Z698 418 aa20.71■□□□□ 0.91
TMEM88-201ENST00000301599 NME8Q8N427 588 aa20.71■□□□□ 0.91
TMEM88-201ENST00000301599 ASB2Q96Q27 587 aa20.71■□□□□ 0.91
TMEM88-201ENST00000301599 UPF3BQ9BZI7 483 aaKnown RBP20.71■□□□□ 0.91
TMEM88-201ENST00000301599 ZNF302Q9NR11 478 aa20.71■□□□□ 0.91
TMEM88-201ENST00000301599 CDY2AQ9Y6F7 541 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms