RNA–Protein interactions for RNA: ENST00000297268.10

COL1A2-201, Transcript of collagen type I alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A2, Length 5,411 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-201ENST00000297268 RIOK1Q9BRS2 568 aaKnown RBP15.31■□□□□ 0.04
COL1A2-201ENST00000297268 LMNAP02545 664 aaKnown RBP15.31■□□□□ 0.04
COL1A2-201ENST00000297268 PDZD4Q76G19 769 aaPredicted RBP15.31■□□□□ 0.04
COL1A2-201ENST00000297268 EPS15L1Q9UBC2 864 aa15.31■□□□□ 0.04
COL1A2-201ENST00000297268 SYNGAP1Q96PV0 1343 aa15.31■□□□□ 0.04
COL1A2-201ENST00000297268 A6NJR5 290 aa15.31■□□□□ 0.04
COL1A2-201ENST00000297268 GOLGA8SH3BPF8 625 aa15.31■□□□□ 0.04
COL1A2-201ENST00000297268 ABCB5Q2M3G0 1257 aa15.31■□□□□ 0.04
COL1A2-201ENST00000297268 BBS9Q3SYG4 887 aa15.31■□□□□ 0.04
COL1A2-201ENST00000297268 RNF207Q6ZRF8 634 aa15.31■□□□□ 0.04
COL1A2-201ENST00000297268 ZC3H18Q86VM9 953 aaKnown RBP15.31■□□□□ 0.04
COL1A2-201ENST00000297268 SPATA4Q8NEY3 305 aa15.31■□□□□ 0.04
COL1A2-201ENST00000297268 PPWD1Q96BP3 646 aaKnown RBP15.31■□□□□ 0.04
COL1A2-201ENST00000297268 CYTH2Q99418 400 aa15.31■□□□□ 0.04
COL1A2-201ENST00000297268 LAMC1P11047 1609 aa15.31■□□□□ 0.04
COL1A2-201ENST00000297268 KRT3P12035 628 aa15.3■□□□□ 0.04
COL1A2-201ENST00000297268 SYT2Q8N9I0 419 aaPredicted RBP15.3■□□□□ 0.04
COL1A2-201ENST00000297268 KCNV2Q8TDN2 545 aa15.3■□□□□ 0.04
COL1A2-201ENST00000297268 GJA3Q9Y6H8 435 aa15.3■□□□□ 0.04
COL1A2-201ENST00000297268 A0A0G2JND7 137 aa15.3■□□□□ 0.04
COL1A2-201ENST00000297268 PPFIA2O75334 1257 aa15.3■□□□□ 0.04
COL1A2-201ENST00000297268 IL6STP40189 918 aaPredicted RBP15.3■□□□□ 0.04
COL1A2-201ENST00000297268 PFKFB3Q16875 520 aaPredicted RBP15.3■□□□□ 0.04
COL1A2-201ENST00000297268 ZNF710Q8N1W2 664 aa15.3■□□□□ 0.04
COL1A2-201ENST00000297268 VIPAS39Q9H9C1 493 aa15.3■□□□□ 0.04
COL1A2-201ENST00000297268 PACSIN2Q9UNF0 486 aaPredicted RBP15.3■□□□□ 0.04
COL1A2-201ENST00000297268 CAPN9O14815 690 aa15.3■□□□□ 0.04
COL1A2-201ENST00000297268 MYO1EQ12965 1108 aa15.3■□□□□ 0.04
COL1A2-201ENST00000297268 FAM83BQ5T0W9 1011 aa15.3■□□□□ 0.04
COL1A2-201ENST00000297268 DNAJC24Q6P3W2 148 aa15.3■□□□□ 0.04
COL1A2-201ENST00000297268 RAPH1Q70E73 1250 aa15.3■□□□□ 0.04
COL1A2-201ENST00000297268 CENPUQ71F23 418 aa15.3■□□□□ 0.04
COL1A2-201ENST00000297268 KIAA0825Q8IV33 1275 aa15.3■□□□□ 0.04
COL1A2-201ENST00000297268 LARGE2Q8N3Y3 721 aa15.3■□□□□ 0.04
COL1A2-201ENST00000297268 CCDC17Q96LX7 622 aa15.3■□□□□ 0.04
COL1A2-201ENST00000297268 LRRC1Q9BTT6 524 aa15.3■□□□□ 0.04
COL1A2-201ENST00000297268 SUGCTQ9HAC7 445 aa15.3■□□□□ 0.04
COL1A2-201ENST00000297268 DNAJC12Q9UKB3 198 aa15.3■□□□□ 0.04
COL1A2-201ENST00000297268 A0A1W2PQC6 194 aa15.3■□□□□ 0.04
COL1A2-201ENST00000297268 TTC4O95801 387 aa15.3■□□□□ 0.04
COL1A2-201ENST00000297268 ST13P4Q8IZP2 240 aaPredicted RBP15.3■□□□□ 0.04
COL1A2-201ENST00000297268 PROM2Q8N271 834 aa15.3■□□□□ 0.04
COL1A2-201ENST00000297268 PYROXD1Q8WU10 500 aa15.3■□□□□ 0.04
COL1A2-201ENST00000297268 CHMP6Q96FZ7 201 aa15.3■□□□□ 0.04
COL1A2-201ENST00000297268 CENPKQ9BS16 269 aa15.3■□□□□ 0.04
COL1A2-201ENST00000297268 WDR11Q9BZH6 1224 aa15.3■□□□□ 0.04
COL1A2-201ENST00000297268 MLXIPLQ9NP71 852 aa15.3■□□□□ 0.04
COL1A2-201ENST00000297268 MIF4GDA9UHW6 222 aaKnown RBP15.3■□□□□ 0.04
COL1A2-201ENST00000297268 RASA4BC9J798 803 aa15.3■□□□□ 0.04
COL1A2-201ENST00000297268 RASA4O43374 803 aa15.3■□□□□ 0.04
COL1A2-201ENST00000297268 STOX1Q6ZVD7 989 aa15.3■□□□□ 0.04
COL1A2-201ENST00000297268 SPICE1Q8N0Z3 855 aa15.3■□□□□ 0.04
COL1A2-201ENST00000297268 PIP4K2CQ8TBX8 421 aa15.3■□□□□ 0.04
COL1A2-201ENST00000297268 FAM81BQ96LP2 452 aa15.3■□□□□ 0.04
COL1A2-201ENST00000297268 CCPG1Q9ULG6 757 aa15.3■□□□□ 0.04
COL1A2-201ENST00000297268 HEG1Q9ULI3 1381 aa15.29■□□□□ 0.04
COL1A2-201ENST00000297268 ATP5HO75947 161 aa15.29■□□□□ 0.04
COL1A2-201ENST00000297268 DARS2Q6PI48 645 aaKnown RBP15.29■□□□□ 0.04
COL1A2-201ENST00000297268 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.29■□□□□ 0.04
COL1A2-201ENST00000297268 SAYSD1Q9NPB0 183 aa15.29■□□□□ 0.04
COL1A2-201ENST00000297268 KMT5AQ9NQR1 393 aa15.29■□□□□ 0.04
COL1A2-201ENST00000297268 SHROOM2Q13796 1616 aa15.29■□□□□ 0.04
COL1A2-201ENST00000297268 ROBO2Q9HCK4 1378 aa15.29■□□□□ 0.04
COL1A2-201ENST00000297268 ESRRGP62508 458 aa15.29■□□□□ 0.04
COL1A2-201ENST00000297268 DOK7Q18PE1 504 aa15.29■□□□□ 0.04
COL1A2-201ENST00000297268 TTLL11Q8NHH1 800 aa15.29■□□□□ 0.04
COL1A2-201ENST00000297268 SDCCAG3Q96C92 435 aa15.29■□□□□ 0.04
COL1A2-201ENST00000297268 CSRNP1Q96S65 589 aa15.29■□□□□ 0.04
COL1A2-201ENST00000297268 GINM1Q9NU53 330 aa15.29■□□□□ 0.04
COL1A2-201ENST00000297268 CAPN11Q9UMQ6 739 aa15.29■□□□□ 0.04
COL1A2-201ENST00000297268 CLEC11AQ9Y240 323 aa15.29■□□□□ 0.04
COL1A2-201ENST00000297268 GOLGA8QA0A0J9YX86 632 aa15.29■□□□□ 0.04
COL1A2-201ENST00000297268 A0A1B0GTH6 734 aa15.29■□□□□ 0.04
COL1A2-201ENST00000297268 GOLGA8OA6NCC3 632 aa15.29■□□□□ 0.04
COL1A2-201ENST00000297268 GOLGA8NF8WBI6 632 aa15.29■□□□□ 0.04
COL1A2-201ENST00000297268 ZNF185O15231 689 aa15.29■□□□□ 0.04
COL1A2-201ENST00000297268 GYG2O15488 501 aa15.29■□□□□ 0.04
COL1A2-201ENST00000297268 MEFVO15553 781 aaPredicted RBP15.29■□□□□ 0.04
COL1A2-201ENST00000297268 CRKLP46109 303 aaKnown RBP15.29■□□□□ 0.04
COL1A2-201ENST00000297268 HSPA2P54652 639 aa15.29■□□□□ 0.04
COL1A2-201ENST00000297268 MECOMQ03112 1051 aa15.29■□□□□ 0.04
COL1A2-201ENST00000297268 NBPF10Q6P3W6 841 aaKnown RBP15.29■□□□□ 0.04
COL1A2-201ENST00000297268 FAM167BQ9BTA0 163 aa15.29■□□□□ 0.04
COL1A2-201ENST00000297268 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.29■□□□□ 0.04
COL1A2-201ENST00000297268 IQANK1A0A1B0GTG1 560 aa15.29■□□□□ 0.04
COL1A2-201ENST00000297268 PDHA1P08559 390 aa15.29■□□□□ 0.04
COL1A2-201ENST00000297268 FBXW10Q5XX13 1052 aa15.29■□□□□ 0.04
COL1A2-201ENST00000297268 SRRM1Q8IYB3 904 aaKnown RBP15.29■□□□□ 0.04
COL1A2-201ENST00000297268 CFAP36Q96G28 342 aa15.29■□□□□ 0.04
COL1A2-201ENST00000297268 TMEM60Q9H2L4 133 aa15.29■□□□□ 0.04
COL1A2-201ENST00000297268 ECT2Q9H8V3 914 aa15.29■□□□□ 0.04
COL1A2-201ENST00000297268 POTEMA6NI47 508 aa15.28■□□□□ 0.04
COL1A2-201ENST00000297268 H0YIN7 160 aa15.28■□□□□ 0.04
COL1A2-201ENST00000297268 ACTN1P12814 892 aa15.28■□□□□ 0.04
COL1A2-201ENST00000297268 FMR1Q06787 632 aaKnown RBP eCLIP15.28■□□□□ 0.04
COL1A2-201ENST00000297268 BRDTQ58F21 947 aaPredicted RBP15.28■□□□□ 0.04
COL1A2-201ENST00000297268 PPP1R2P3Q6NXS1 205 aa15.28■□□□□ 0.04
COL1A2-201ENST00000297268 DGKHQ86XP1 1220 aa15.28■□□□□ 0.04
COL1A2-201ENST00000297268 FBXL5Q9UKA1 691 aa15.28■□□□□ 0.04
COL1A2-201ENST00000297268 CFAP74Q9C0B2 1584 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms