RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 DAAM1Q9Y4D1 1078 aa14.27□□□□□ -0.13
COL1A1-201ENST00000225964 K7ERI5 159 aa14.27□□□□□ -0.13
COL1A1-201ENST00000225964 NEMP1O14524 444 aa14.27□□□□□ -0.13
COL1A1-201ENST00000225964 SEPT12Q8IYM1 358 aa14.27□□□□□ -0.13
COL1A1-201ENST00000225964 SLC7A5P2Q9GIP4 190 aa14.27□□□□□ -0.13
COL1A1-201ENST00000225964 HPCAL4Q9UM19 191 aa14.27□□□□□ -0.13
COL1A1-201ENST00000225964 PNMA6FA0A0J9YX94 578 aa14.26□□□□□ -0.13
COL1A1-201ENST00000225964 CLTAP09496 248 aa14.26□□□□□ -0.13
COL1A1-201ENST00000225964 NCF2P19878 526 aaPredicted RBP14.26□□□□□ -0.13
COL1A1-201ENST00000225964 PSMA2P25787 234 aa14.26□□□□□ -0.13
COL1A1-201ENST00000225964 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.26□□□□□ -0.13
COL1A1-201ENST00000225964 INSRP06213 1382 aa14.26□□□□□ -0.13
COL1A1-201ENST00000225964 ARAP3Q8WWN8 1544 aa14.26□□□□□ -0.13
COL1A1-201ENST00000225964 LRRD1A4D1F6 860 aa14.26□□□□□ -0.13
COL1A1-201ENST00000225964 ZBED1O96006 694 aa14.26□□□□□ -0.13
COL1A1-201ENST00000225964 DRP2Q13474 957 aa14.26□□□□□ -0.13
COL1A1-201ENST00000225964 ZNF467Q7Z7K2 595 aaPredicted RBP14.26□□□□□ -0.13
COL1A1-201ENST00000225964 STAG1Q8WVM7 1258 aa14.26□□□□□ -0.13
COL1A1-201ENST00000225964 ABCA5Q8WWZ7 1642 aa14.26□□□□□ -0.13
COL1A1-201ENST00000225964 MT-ND3P03897 115 aa14.26□□□□□ -0.13
COL1A1-201ENST00000225964 PAMP19021 973 aa14.26□□□□□ -0.13
COL1A1-201ENST00000225964 PDCD7Q8N8D1 485 aaKnown RBP14.26□□□□□ -0.13
COL1A1-201ENST00000225964 EMILIN3Q9NT22 766 aa14.26□□□□□ -0.13
COL1A1-201ENST00000225964 MAN1B1Q9UKM7 699 aa14.26□□□□□ -0.13
COL1A1-201ENST00000225964 GDAQ9Y2T3 454 aa14.26□□□□□ -0.13
COL1A1-201ENST00000225964 PLTPP55058 493 aa14.26□□□□□ -0.13
COL1A1-201ENST00000225964 ART3Q13508 389 aa14.26□□□□□ -0.13
COL1A1-201ENST00000225964 KIF19Q2TAC6 998 aa14.26□□□□□ -0.13
COL1A1-201ENST00000225964 SLC35F6Q8N357 371 aa14.26□□□□□ -0.13
COL1A1-201ENST00000225964 RAVER2Q9HCJ3 691 aaKnown RBP14.26□□□□□ -0.13
COL1A1-201ENST00000225964 PPP1R9AQ9ULJ8 1098 aa14.26□□□□□ -0.13
COL1A1-201ENST00000225964 SFI1A8K8P3 1242 aa14.26□□□□□ -0.13
COL1A1-201ENST00000225964 PDCD2Q16342 344 aaPredicted RBP14.26□□□□□ -0.13
COL1A1-201ENST00000225964 C10orf76Q5T2E6 689 aa14.26□□□□□ -0.13
COL1A1-201ENST00000225964 ERICH1Q86X53 443 aa14.26□□□□□ -0.13
COL1A1-201ENST00000225964 TEX2Q8IWB9 1127 aa14.26□□□□□ -0.13
COL1A1-201ENST00000225964 ANTXR1Q9H6X2 564 aa14.26□□□□□ -0.13
COL1A1-201ENST00000225964 DBNLQ9UJU6 430 aaKnown RBP14.26□□□□□ -0.13
COL1A1-201ENST00000225964 ATP8A1Q9Y2Q0 1164 aa14.26□□□□□ -0.13
COL1A1-201ENST00000225964 UNC13AQ9UPW8 1703 aa14.26□□□□□ -0.13
COL1A1-201ENST00000225964 PRAMEF22A3QJZ6 481 aa14.26□□□□□ -0.13
COL1A1-201ENST00000225964 WDR91A4D1P6 747 aa14.26□□□□□ -0.13
COL1A1-201ENST00000225964 FTCDO95954 541 aa14.26□□□□□ -0.13
COL1A1-201ENST00000225964 CHEK2O96017 543 aa14.26□□□□□ -0.13
COL1A1-201ENST00000225964 APOA5Q6Q788 366 aa14.26□□□□□ -0.13
COL1A1-201ENST00000225964 BANK1Q8NDB2 785 aa14.26□□□□□ -0.13
COL1A1-201ENST00000225964 SUN1O94901 812 aa14.25□□□□□ -0.13
COL1A1-201ENST00000225964 CXCR5P32302 372 aa14.25□□□□□ -0.13
COL1A1-201ENST00000225964 MXI1P50539 228 aa14.25□□□□□ -0.13
COL1A1-201ENST00000225964 TSPY1Q01534 308 aa14.25□□□□□ -0.13
COL1A1-201ENST00000225964 ZKSCAN8Q15776 578 aaPredicted RBP14.25□□□□□ -0.13
COL1A1-201ENST00000225964 FAM83BQ5T0W9 1011 aa14.25□□□□□ -0.13
COL1A1-201ENST00000225964 TWF2Q6IBS0 349 aaKnown RBP14.25□□□□□ -0.13
COL1A1-201ENST00000225964 DHX38Q92620 1227 aaKnown RBP14.25□□□□□ -0.13
COL1A1-201ENST00000225964 HSPA8P11142 646 aaKnown RBP14.25□□□□□ -0.13
COL1A1-201ENST00000225964 SLMAPQ14BN4 828 aa14.25□□□□□ -0.13
COL1A1-201ENST00000225964 TCP11X2Q5H9J9 407 aa14.25□□□□□ -0.13
COL1A1-201ENST00000225964 CCDC124Q96CT7 223 aaKnown RBP14.25□□□□□ -0.13
COL1A1-201ENST00000225964 EPB41L5Q9HCM4 733 aa14.25□□□□□ -0.13
COL1A1-201ENST00000225964 SUGT1Q9Y2Z0 365 aa14.25□□□□□ -0.13
COL1A1-201ENST00000225964 MMP10P09238 476 aa14.25□□□□□ -0.13
COL1A1-201ENST00000225964 KIAA1755Q5JYT7 1200 aa14.25□□□□□ -0.13
COL1A1-201ENST00000225964 THNSL1Q8IYQ7 743 aa14.25□□□□□ -0.13
COL1A1-201ENST00000225964 FAF2Q96CS3 445 aa14.25□□□□□ -0.13
COL1A1-201ENST00000225964 COA1Q9GZY4 146 aa14.25□□□□□ -0.13
COL1A1-201ENST00000225964 LSG1Q9H089 658 aaKnown RBP14.25□□□□□ -0.13
COL1A1-201ENST00000225964 SAMD9Q5K651 1589 aa14.25□□□□□ -0.13
COL1A1-201ENST00000225964 SLFN12LQ6IEE8 588 aa14.25□□□□□ -0.13
COL1A1-201ENST00000225964 RBM46Q8TBY0 533 aaKnown RBP14.25□□□□□ -0.13
COL1A1-201ENST00000225964 CCDC138Q96M89 665 aa14.25□□□□□ -0.13
COL1A1-201ENST00000225964 NPHP4O75161 1426 aaPredicted RBP14.25□□□□□ -0.13
COL1A1-201ENST00000225964 MMP1P03956 469 aa14.25□□□□□ -0.13
COL1A1-201ENST00000225964 PLCG1P19174 1290 aa14.25□□□□□ -0.13
COL1A1-201ENST00000225964 CRKP46108 304 aa14.25□□□□□ -0.13
COL1A1-201ENST00000225964 ZNF589Q86UQ0 364 aaPredicted RBP14.25□□□□□ -0.13
COL1A1-201ENST00000225964 UNC5CLQ8IV45 518 aa14.25□□□□□ -0.13
COL1A1-201ENST00000225964 SH3RF3Q8TEJ3 882 aaPredicted RBP14.25□□□□□ -0.13
COL1A1-201ENST00000225964 CACNB3P54284 484 aa14.24□□□□□ -0.13
COL1A1-201ENST00000225964 TBCCQ15814 346 aa14.24□□□□□ -0.13
COL1A1-201ENST00000225964 ACBD5Q5T8D3 534 aaPredicted RBP14.24□□□□□ -0.13
COL1A1-201ENST00000225964 NLRP10Q86W26 655 aa14.24□□□□□ -0.13
COL1A1-201ENST00000225964 MMP19Q99542 508 aa14.24□□□□□ -0.13
COL1A1-201ENST00000225964 SYNDIG1LA6NDD5 238 aa14.24□□□□□ -0.13
COL1A1-201ENST00000225964 MAP3K7O43318 606 aa14.24□□□□□ -0.13
COL1A1-201ENST00000225964 HOXD10P28358 340 aa14.24□□□□□ -0.13
COL1A1-201ENST00000225964 ARHGDIAP52565 204 aa14.24□□□□□ -0.13
COL1A1-201ENST00000225964 GSDMAQ96QA5 445 aa14.24□□□□□ -0.13
COL1A1-201ENST00000225964 ANLNQ9NQW6 1124 aa14.24□□□□□ -0.13
COL1A1-201ENST00000225964 TMEM247A6NEH6 219 aa14.24□□□□□ -0.13
COL1A1-201ENST00000225964 GH2P01242 217 aa14.24□□□□□ -0.13
COL1A1-201ENST00000225964 STXBP2Q15833 593 aa14.24□□□□□ -0.13
COL1A1-201ENST00000225964 CCHCR1Q8TD31 782 aa14.24□□□□□ -0.13
COL1A1-201ENST00000225964 PUS7LQ9H0K6 701 aaKnown RBP14.24□□□□□ -0.13
COL1A1-201ENST00000225964 JRKLQ9Y4A0 524 aa14.24□□□□□ -0.13
COL1A1-201ENST00000225964 KDM5DQ9BY66 1539 aa14.24□□□□□ -0.13
COL1A1-201ENST00000225964 HADHAP40939 763 aa14.24□□□□□ -0.13
COL1A1-201ENST00000225964 MTMR1Q13613 665 aa14.24□□□□□ -0.13
COL1A1-201ENST00000225964 SCYL3Q8IZE3 742 aa14.24□□□□□ -0.13
COL1A1-201ENST00000225964 ATP6V0A4Q9HBG4 840 aa14.24□□□□□ -0.13
COL1A1-201ENST00000225964 GINM1Q9NU53 330 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 144.6 ms