RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Aldh1a2Q62148 518 aa10□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Cnnm4Q69ZF7 771 aa10□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Pcdhga7Q6DD96 935 aa10□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Krt9Q6RHW0 743 aa10□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Ckap2lQ7TS74 745 aa10□□□□□ -0.81
Upf3b-201ENSMUST00000076265 PolrmtQ8BKF1 1207 aaKnown RBP10□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Spice1Q8C804 860 aa10□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Rps6kl1Q8R2S1 544 aa10□□□□□ -0.81
Upf3b-201ENSMUST00000076265 DccP70211 1447 aa9.99□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Cyp26c1B2RXA7 518 aa9.99□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Aknad1E9Q8N6 675 aa9.99□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Mfsd4b4J3QNS5 503 aa9.99□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Mtnd3P03899 115 aa9.99□□□□□ -0.81
Upf3b-201ENSMUST00000076265 RapsnP12672 412 aa9.99□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Prl3d1P18121 224 aa9.99□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Bmi1P25916 324 aa9.99□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Cd22P35329 862 aa9.99□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Nap1l2P51860 460 aa9.99□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Gsk3aQ2NL51 490 aa9.99□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Ric8aQ3TIR3 530 aa9.99□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Rnf20Q5DTM8 973 aa9.99□□□□□ -0.81
Upf3b-201ENSMUST00000076265 PkdccQ5RJI4 492 aa9.99□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Madcam1Q61826 405 aa9.99□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Zmym6Q8BS54 1249 aa9.99□□□□□ -0.81
Upf3b-201ENSMUST00000076265 E330021D16RikQ8BW45 371 aa9.99□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Rbm17Q8JZX4 405 aaKnown RBP9.99□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Apbb3Q8R1C9 486 aa9.99□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Ssx2ipQ8VC66 615 aa9.99□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Cabp4Q8VHC5 271 aa9.99□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Nrif1Q923B3 828 aa9.99□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Rilpl2Q99LE1 197 aa9.99□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Ndufb5Q9CQH3 189 aa9.99□□□□□ -0.81
Upf3b-201ENSMUST00000076265 PpidQ9CR16 370 aaKnown RBP9.99□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Rfc5Q9D0F6 339 aa9.99□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Dlgap1Q9D415 992 aa9.99□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Leng1Q9DB98 261 aa9.99□□□□□ -0.81
Upf3b-201ENSMUST00000076265 CenpjQ569L8 1344 aa9.99□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Polr3aB2RXC6 1390 aa9.99□□□□□ -0.81
Upf3b-201ENSMUST00000076265 8030474K03RikE9Q4Y8 554 aa9.99□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Prkg1P0C605 671 aa9.99□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Slc4a3P16283 1227 aa9.99□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Atf2P16951 487 aaKnown RBP9.99□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Atp5bP56480 529 aaKnown RBP9.99□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Eif1aQ60872 144 aaKnown RBP9.99□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Tsga10Q6NY15 697 aa9.99□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Asic4Q7TNS7 539 aa9.99□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Eif1axQ8BMJ3 144 aaKnown RBP9.99□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Gga1Q8R0H9 635 aa9.99□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Ndufs2Q91WD5 463 aa9.99□□□□□ -0.81
Upf3b-201ENSMUST00000076265 As3mtQ91WU5 376 aa9.99□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Fam76aQ922G2 307 aa9.99□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Dach2Q925Q8 634 aa9.99□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Mccc1Q99MR8 717 aa9.99□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Rnf225Q9D7D1 332 aa9.99□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Ddi1Q9DAF3 408 aa9.99□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Mgea5Q9EQQ9 916 aa9.99□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Actn2Q9JI91 894 aa9.99□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Syt5Q9R0N5 386 aa9.99□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Zfp142G5E869 1843 aa9.98□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Tmem2Q5FWI3 1383 aa9.98□□□□□ -0.81
Upf3b-201ENSMUST00000076265 IapP03975 557 aa9.98□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Mcm3P25206 812 aaKnown RBP9.98□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Atp13a4Q5XF90 1193 aa9.98□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Creg2Q8BGC9 288 aa9.98□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Dnm3Q8BZ98 863 aa9.98□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Gpr61Q8C010 449 aa9.98□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Snx16Q8C080 344 aa9.98□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Zfp317Q8C0Q5 607 aa9.98□□□□□ -0.81
Upf3b-201ENSMUST00000076265 RestQ8VIG1 1082 aa9.98□□□□□ -0.81
Upf3b-201ENSMUST00000076265 DgkgQ91WG7 788 aa9.98□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Anxa13Q99JG3 317 aa9.98□□□□□ -0.81
Upf3b-201ENSMUST00000076265 NaspQ99MD9 773 aaKnown RBP9.98□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Chchd3Q9CRB9 227 aaKnown RBP9.98□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Tex9Q9D845 387 aa9.98□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Tmod2Q9JKK7 351 aa9.98□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Kif7B7ZNG0 1348 aa9.98□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Als2Q920R0 1651 aa9.98□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Sec14l5B2RXM5 696 aa9.98□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Dpysl4O35098 572 aa9.98□□□□□ -0.81
Upf3b-201ENSMUST00000076265 BhmtO35490 407 aaKnown RBP9.98□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Gosr1O88630 250 aa9.98□□□□□ -0.81
Upf3b-201ENSMUST00000076265 PtprcP06800 1291 aa9.98□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Ccr1P51675 355 aa9.98□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Cldn34b4Q3V0X2 211 aa9.98□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Mcm7Q61881 719 aaKnown RBP9.98□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Kcnt1Q6ZPR4 1224 aa9.98□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Nhsl1Q8CAF4 1587 aa9.98□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Usp45Q8K387 813 aa9.98□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Hexim1Q8R409 356 aaKnown RBP9.98□□□□□ -0.81
Upf3b-201ENSMUST00000076265 ParnQ8VDG3 624 aa9.98□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Hspa14Q99M31 509 aa9.98□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Ndufaf7Q9CWG8 436 aa9.98□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Ccdc81Q9D5W4 654 aa9.98□□□□□ -0.81
Upf3b-201ENSMUST00000076265 RhouQ9EQT3 261 aa9.98□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Hao2Q9NYQ2 353 aa9.98□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Tex21Q9R0U9 575 aa9.98□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Snx1Q9WV80 522 aa9.98□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Adgrl1Q80TR1 1466 aa9.97□□□□□ -0.81
Upf3b-201ENSMUST00000076265 C5P06684 1680 aa9.97□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Wnk3Q80XP9 1757 aa9.97□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 104.9 ms