RNA–Protein interactions for RNA: snR50

snR50, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR50, Length 90 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR50snR50 MDM36Q06820 579 aa-0.17□□□□□ -2.44
snR50snR50 LOT6Q07923 191 aa-0.17□□□□□ -2.44
snR50snR50 SKI7Q08491 747 aaPredicted RBP-0.17□□□□□ -2.44
snR50snR50 TCO89Q08921 799 aa-0.17□□□□□ -2.44
snR50snR50 FMP40Q08968 688 aaPredicted RBP-0.17□□□□□ -2.44
snR50snR50 AVL9Q12500 764 aa-0.17□□□□□ -2.44
snR50snR50 RMD5Q12508 421 aa-0.17□□□□□ -2.44
snR50snR50 EPT1P22140 391 aa-0.18□□□□□ -2.44
snR50snR50 RAD57P25301 460 aa-0.18□□□□□ -2.44
snR50snR50 YIH1P25637 258 aa-0.18□□□□□ -2.44
snR50snR50 MSP1P28737 362 aa-0.18□□□□□ -2.44
snR50snR50 CLB6P32943 380 aa-0.18□□□□□ -2.44
snR50snR50 TEF4P36008 412 aaKnown RBP-0.18□□□□□ -2.44
snR50snR50 SOL2P37262 315 aa-0.18□□□□□ -2.44
snR50snR50 SHE3P38272 425 aaKnown RBP-0.18□□□□□ -2.44
snR50snR50 LSM12P38828 187 aaKnown RBP-0.18□□□□□ -2.44
snR50snR50 FPR3P38911 411 aaKnown RBP-0.18□□□□□ -2.44
snR50snR50 UFE1P41834 346 aa-0.18□□□□□ -2.44
snR50snR50 LYS4P49367 693 aaPredicted RBP-0.18□□□□□ -2.44
snR50snR50 SEH1P53011 349 aaKnown RBP-0.18□□□□□ -2.44
snR50snR50 DSL1P53847 754 aa-0.18□□□□□ -2.44
snR50snR50 MRPL13Q02204 264 aa-0.18□□□□□ -2.44
snR50snR50 YML131WQ03102 365 aa-0.18□□□□□ -2.44
snR50snR50 SYF1Q04048 859 aaPredicted RBP-0.18□□□□□ -2.44
snR50snR50 UBX2Q04228 584 aa-0.18□□□□□ -2.44
snR50snR50 VPS38Q05919 439 aa-0.18□□□□□ -2.44
snR50snR50 YDL114WQ07530 308 aa-0.18□□□□□ -2.44
snR50snR50 RAX1Q08760 435 aa-0.18□□□□□ -2.44
snR50snR50 ORT1Q12375 292 aa-0.18□□□□□ -2.44
snR50snR50 EAF3Q12432 401 aa-0.18□□□□□ -2.44
snR50snR50 YTA7P40340 1379 aa-0.19□□□□□ -2.44
snR50snR50 RAV1P47104 1357 aa-0.19□□□□□ -2.44
snR50snR50 MET2P08465 486 aa-0.19□□□□□ -2.44
snR50snR50 NUC1P08466 329 aa-0.19□□□□□ -2.44
snR50snR50 YAK1P14680 807 aa-0.19□□□□□ -2.44
snR50snR50 CUP2P15315 225 aa-0.19□□□□□ -2.44
snR50snR50 KRE1P17260 313 aa-0.19□□□□□ -2.44
snR50snR50 GIT1P25346 518 aa-0.19□□□□□ -2.44
snR50snR50 SIN4P32259 974 aa-0.19□□□□□ -2.44
snR50snR50 TFB1P32776 642 aa-0.19□□□□□ -2.44
snR50snR50 PDC2P32896 925 aa-0.19□□□□□ -2.44
snR50snR50 UBP11P36026 717 aa-0.19□□□□□ -2.44
snR50snR50 YKL133CP36066 463 aa-0.19□□□□□ -2.44
snR50snR50 DBP7P36120 742 aaKnown RBP-0.19□□□□□ -2.44
snR50snR50 GRX7P38068 203 aa-0.19□□□□□ -2.44
snR50snR50 YHK8P38776 514 aa-0.19□□□□□ -2.44
snR50snR50 MED6P38782 295 aa-0.19□□□□□ -2.44
snR50snR50 CCT2P39076 527 aaKnown RBP-0.19□□□□□ -2.44
snR50snR50 YCH1P42937 148 aa-0.19□□□□□ -2.44
snR50snR50 YJR008WP47085 338 aa-0.19□□□□□ -2.44
snR50snR50 VEL1P53058 206 aa-0.19□□□□□ -2.44
snR50snR50 YGR250CP53316 781 aaKnown RBP-0.19□□□□□ -2.44
snR50snR50 ARC35P53731 342 aaKnown RBP-0.19□□□□□ -2.44
snR50snR50 ALF1P53904 254 aa-0.19□□□□□ -2.44
snR50snR50 BET5Q03630 159 aa-0.19□□□□□ -2.44
snR50snR50 FIN1Q03898 291 aa-0.19□□□□□ -2.44
snR50snR50 APC4Q04601 652 aa-0.19□□□□□ -2.44
snR50snR50 PRM6Q04705 352 aa-0.19□□□□□ -2.44
snR50snR50 NBP2Q12163 236 aa-0.19□□□□□ -2.44
snR50snR50 TPT1Q12272 230 aaKnown RBP-0.19□□□□□ -2.44
snR50snR50 PHO80P20052 293 aa-0.2□□□□□ -2.44
snR50snR50 FAR1P21268 830 aa-0.2□□□□□ -2.44
snR50snR50 CMK2P22517 447 aa-0.2□□□□□ -2.44
snR50snR50 DBF20P32328 564 aa-0.2□□□□□ -2.44
snR50snR50 AUR1P36107 401 aaPredicted RBP-0.2□□□□□ -2.44
snR50snR50 SMC2P38989 1170 aaKnown RBP-0.2□□□□□ -2.44
snR50snR50 RRT13P40042 185 aa-0.2□□□□□ -2.44
snR50snR50 ALG5P40350 334 aa-0.2□□□□□ -2.44
snR50snR50 TFG2P41896 400 aaPredicted RBP-0.2□□□□□ -2.44
snR50snR50 PEX8P53248 589 aa-0.2□□□□□ -2.44
snR50snR50 YNL095CP53932 642 aa-0.2□□□□□ -2.44
snR50snR50 YPL080CQ02826 108 aa-0.2□□□□□ -2.44
snR50snR50 TDA1Q03533 586 aa-0.2□□□□□ -2.44
snR50snR50 ENT5Q03769 411 aaKnown RBP-0.2□□□□□ -2.44
snR50snR50 GMC1Q04399 608 aa-0.2□□□□□ -2.44
snR50snR50 HSP31Q04432 237 aa-0.2□□□□□ -2.44
snR50snR50 YDR114CQ04597 100 aa-0.2□□□□□ -2.44
snR50snR50 ASA1Q06822 443 aa-0.2□□□□□ -2.44
snR50snR50 YOR012WQ12351 137 aa-0.2□□□□□ -2.44
snR50snR50 HIF1Q12373 385 aa-0.2□□□□□ -2.44
snR50snR50 PIS1P06197 220 aaKnown RBP-0.21□□□□□ -2.44
snR50snR50 RHO2P06781 192 aa-0.21□□□□□ -2.44
snR50snR50 SEC53P07283 254 aaKnown RBP-0.21□□□□□ -2.44
snR50snR50 IMA3P0CW40 589 aa-0.21□□□□□ -2.44
snR50snR50 IMA4P0CW41 589 aa-0.21□□□□□ -2.44
snR50snR50 CTA1P15202 515 aa-0.21□□□□□ -2.44
snR50snR50 ATP10P18496 279 aa-0.21□□□□□ -2.44
snR50snR50 CTR86P25355 563 aa-0.21□□□□□ -2.44
snR50snR50 PRD1P25375 712 aa-0.21□□□□□ -2.44
snR50snR50 YCL068CP25593 260 aa-0.21□□□□□ -2.44
snR50snR50 FUN26P31381 517 aa-0.21□□□□□ -2.44
snR50snR50 DPH5P32469 300 aaPredicted RBP-0.21□□□□□ -2.44
snR50snR50 PRP21P32524 280 aaPredicted RBP-0.21□□□□□ -2.44
snR50snR50 SPS19P32573 292 aaKnown RBP-0.21□□□□□ -2.44
snR50snR50 TOA1P32773 286 aa-0.21□□□□□ -2.44
snR50snR50 CNS1P33313 385 aa-0.21□□□□□ -2.44
snR50snR50 KDX1P36005 433 aa-0.21□□□□□ -2.44
snR50snR50 MAL33P38157 468 aa-0.21□□□□□ -2.44
snR50snR50 YER010CP40011 234 aa-0.21□□□□□ -2.44
snR50snR50 HIS6P40545 261 aa-0.21□□□□□ -2.44
Retrieved 100 of 5,963 RNA–protein pairs in 67.4 ms