RNA–Protein interactions for RNA: snR42

snR42, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR42, Length 351 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR42snR42 COS4P43542 379 aa3.01□□□□□ -1.93
snR42snR42 FMP32P43557 207 aa3.01□□□□□ -1.93
snR42snR42 ARC1P46672 376 aaKnown RBP3.01□□□□□ -1.93
snR42snR42 STB2P46679 850 aa3.01□□□□□ -1.93
snR42snR42 YGL176CP46945 554 aa3.01□□□□□ -1.93
snR42snR42 JHD2P47156 728 aaPredicted RBP3.01□□□□□ -1.93
snR42snR42 UPF3P48412 387 aaKnown RBP3.01□□□□□ -1.93
snR42snR42 ROG1P53118 685 aa3.01□□□□□ -1.93
snR42snR42 NOP19P53317 196 aaPredicted RBP3.01□□□□□ -1.93
snR42snR42 LSC1P53598 329 aaKnown RBP3.01□□□□□ -1.93
snR42snR42 RCF2P53721 224 aa3.01□□□□□ -1.93
snR42snR42 YML131WQ03102 365 aa3.01□□□□□ -1.93
snR42snR42 NUP53Q03790 475 aa3.01□□□□□ -1.93
snR42snR42 APC4Q04601 652 aa3.01□□□□□ -1.93
snR42snR42 MDM30Q05930 598 aa3.01□□□□□ -1.93
snR42snR42 PDR8Q06149 701 aa3.01□□□□□ -1.93
snR42snR42 REX4Q08237 289 aa3.01□□□□□ -1.93
snR42snR42 YLR049CQ12110 428 aa3.01□□□□□ -1.93
snR42snR42 YPR022CQ12139 1133 aa3.01□□□□□ -1.93
snR42snR42 SPE4Q12455 300 aa3.01□□□□□ -1.93
snR42snR42 RRP36Q12481 300 aaPredicted RBP3.01□□□□□ -1.93
snR42snR42 YPR064WQ12492 139 aa3.01□□□□□ -1.93
snR42snR42 YCL012CQ8J0M4 134 aa3.01□□□□□ -1.93
snR42snR42 Q0010Q9ZZX9 128 aa3.01□□□□□ -1.93
snR42snR42 CYR1P08678 2026 aaKnown RBP3.01□□□□□ -1.93
snR42snR42 RPL7AP05737 244 aaKnown RBP3□□□□□ -1.93
snR42snR42 SPT3P06844 337 aa3□□□□□ -1.93
snR42snR42 DST1P07273 309 aa3□□□□□ -1.93
snR42snR42 KAR1P11927 433 aa3□□□□□ -1.93
snR42snR42 PRP2P20095 876 aaPredicted RBP3□□□□□ -1.93
snR42snR42 SEC62P21825 274 aa3□□□□□ -1.93
snR42snR42 MXR2P25566 168 aa3□□□□□ -1.93
snR42snR42 CPR3P25719 182 aa3□□□□□ -1.93
snR42snR42 NAM9P27929 486 aa3□□□□□ -1.93
snR42snR42 RPC19P28000 142 aaKnown RBP3□□□□□ -1.93
snR42snR42 IDH2P28241 369 aaKnown RBP3□□□□□ -1.93
snR42snR42 RPS1AP33442 255 aaKnown RBP3□□□□□ -1.93
snR42snR42 RMA1P36001 430 aaKnown RBP3□□□□□ -1.93
snR42snR42 RIM2P38127 377 aa3□□□□□ -1.93
snR42snR42 AXL2P38928 823 aa3□□□□□ -1.93
snR42snR42 YDR089WP38966 869 aa3□□□□□ -1.93
snR42snR42 YHB1P39676 399 aaKnown RBP3□□□□□ -1.93
snR42snR42 PRP39P39682 629 aaKnown RBP3□□□□□ -1.93
snR42snR42 VPS52P39904 641 aa3□□□□□ -1.93
snR42snR42 RPS26AP39938 119 aaKnown RBP3□□□□□ -1.93
snR42snR42 RPS26BP39939 119 aaKnown RBP3□□□□□ -1.93
snR42snR42 GID8P40208 455 aa3□□□□□ -1.93
snR42snR42 GCD10P41814 478 aa3□□□□□ -1.93
snR42snR42 REX2P54964 269 aaKnown RBP3□□□□□ -1.93
snR42snR42 VPS16Q03308 798 aa3□□□□□ -1.93
snR42snR42 SWF1Q04629 336 aa3□□□□□ -1.93
snR42snR42 YDR338CQ05497 695 aa3□□□□□ -1.93
snR42snR42 ENT4Q07872 247 aa3□□□□□ -1.93
snR42snR42 AKR2Q12013 749 aa3□□□□□ -1.93
snR42snR42 NMD4Q12129 218 aa3□□□□□ -1.93
snR42snR42 RPL7BQ12213 244 aaKnown RBP3□□□□□ -1.93
snR42snR42 RPN5Q12250 445 aaKnown RBP3□□□□□ -1.93
snR42snR42 TPO4Q12256 659 aa3□□□□□ -1.93
snR42snR42 MHT1Q12525 324 aa3□□□□□ -1.93
snR42snR42 YNL162W-AQ3E7A8 72 aa3□□□□□ -1.93
snR42snR42 COX1P00401 534 aa2.99□□□□□ -1.93
snR42snR42 CDC9P04819 755 aa2.99□□□□□ -1.93
snR42snR42 LEU4P06208 619 aaKnown RBP2.99□□□□□ -1.93
snR42snR42 STE7P06784 515 aa2.99□□□□□ -1.93
snR42snR42 BUB2P26448 306 aaPredicted RBP2.99□□□□□ -1.93
snR42snR42 ATO2P32907 282 aa2.99□□□□□ -1.93
snR42snR42 LOS1P33418 1100 aaPredicted RBP2.99□□□□□ -1.93
snR42snR42 RPS27AP35997 82 aaKnown RBP2.99□□□□□ -1.93
snR42snR42 SET3P36124 751 aa2.99□□□□□ -1.93
snR42snR42 YKR078WP36158 585 aaKnown RBP2.99□□□□□ -1.93
snR42snR42 YCR087C-AP37263 153 aa2.99□□□□□ -1.93
snR42snR42 BNA4P38169 460 aa2.99□□□□□ -1.93
snR42snR42 YBR071WP38243 211 aa2.99□□□□□ -1.93
snR42snR42 COS111P38308 924 aa2.99□□□□□ -1.93
snR42snR42 RPS27BP38711 82 aa2.99□□□□□ -1.93
snR42snR42 BZZ1P38822 633 aa2.99□□□□□ -1.93
snR42snR42 FRT2P39734 528 aa2.99□□□□□ -1.93
snR42snR42 VRG4P40107 337 aa2.99□□□□□ -1.93
snR42snR42 PFK26P40433 827 aaKnown RBP2.99□□□□□ -1.93
snR42snR42 YIL001WP40560 513 aa2.99□□□□□ -1.93
snR42snR42 CUP9P41817 306 aa2.99□□□□□ -1.93
snR42snR42 PRM10P42946 383 aa2.99□□□□□ -1.93
snR42snR42 UBP6P43593 499 aaKnown RBP2.99□□□□□ -1.93
snR42snR42 GUS1P46655 708 aaKnown RBP RIP-Chip data2.99□□□□□ -1.93not detected
snR42snR42 TIM54P47045 478 aa2.99□□□□□ -1.93
snR42snR42 MAD3P47074 515 aa2.99□□□□□ -1.93
snR42snR42 STE24P47154 453 aa2.99□□□□□ -1.93
snR42snR42 YJR154WP47181 346 aa2.99□□□□□ -1.93
snR42snR42 GTO1P48239 356 aa2.99□□□□□ -1.93
snR42snR42 BIO3P50277 480 aa2.99□□□□□ -1.93
snR42snR42 NNF2P53253 936 aa2.99□□□□□ -1.93
snR42snR42 YNL058CP53947 316 aa2.99□□□□□ -1.93
snR42snR42 SLM2P53955 656 aa2.99□□□□□ -1.93
snR42snR42 ERG13P54839 491 aaKnown RBP2.99□□□□□ -1.93
snR42snR42 GIP3Q03016 1276 aa2.99□□□□□ -1.93
snR42snR42 MUS81Q04149 632 aaPredicted RBP2.99□□□□□ -1.93
snR42snR42 SPR28Q04921 423 aa2.99□□□□□ -1.93
snR42snR42 FAR8Q05040 523 aa2.99□□□□□ -1.93
snR42snR42 RQC1Q05468 723 aaKnown RBP2.99□□□□□ -1.93
snR42snR42 TMA46Q12000 345 aaKnown RBP2.99□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms