RNA–Protein interactions for RNA: YOR373W

NUD1, Transcript of Component of the spindle pole body outer plaque, yeast

Gene NUD1, Length 2,556 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUD1	YOR373W	YIG1	Q08956	461 aa		5.35	□□□□□ -1.55
NUD1	YOR373W	MSB1	P21339	1137 aa	Known RBP	5.35	□□□□□ -1.55
NUD1	YOR373W	ARA1	P38115	344 aa		5.35	□□□□□ -1.55
NUD1	YOR373W	SSP120	P39931	234 aa	Known RBP	5.35	□□□□□ -1.55
NUD1	YOR373W	CAK1	P43568	368 aa	Predicted RBP	5.35	□□□□□ -1.55
NUD1	YOR373W	VAC7	P53950	1165 aa		5.35	□□□□□ -1.55
NUD1	YOR373W	ARP4	P80428	489 aa		5.35	□□□□□ -1.55
NUD1	YOR373W	RAD30	Q04049	632 aa		5.35	□□□□□ -1.55
NUD1	YOR373W	RPN9	Q04062	393 aa	Known RBP	5.35	□□□□□ -1.55
NUD1	YOR373W	ATG23	Q06671	453 aa		5.35	□□□□□ -1.55
NUD1	YOR373W	UAF30	Q08747	228 aa		5.35	□□□□□ -1.55
NUD1	YOR373W	RAD1	P06777	1100 aa		5.34	□□□□□ -1.55
NUD1	YOR373W	CBF1	P17106	351 aa		5.34	□□□□□ -1.55
NUD1	YOR373W	HRR25	P29295	494 aa	Known RBP	5.34	□□□□□ -1.55
NUD1	YOR373W	MRPL9	P31334	269 aa		5.34	□□□□□ -1.55
NUD1	YOR373W	NTR2	P36118	322 aa	Predicted RBP	5.34	□□□□□ -1.55
NUD1	YOR373W	ATP3	P38077	311 aa	Known RBP	5.34	□□□□□ -1.55
NUD1	YOR373W	YHI9	P38765	294 aa		5.34	□□□□□ -1.55
NUD1	YOR373W	GIM4	P40005	111 aa	Known RBP	5.34	□□□□□ -1.55
NUD1	YOR373W	TOM22	P49334	152 aa		5.34	□□□□□ -1.55
NUD1	YOR373W	TAF4	P50105	388 aa		5.34	□□□□□ -1.55
NUD1	YOR373W	MIG2	P53035	382 aa		5.34	□□□□□ -1.55
NUD1	YOR373W	RCF2	P53721	224 aa		5.34	□□□□□ -1.55
NUD1	YOR373W	FRE4	P53746	719 aa		5.34	□□□□□ -1.55
NUD1	YOR373W	TRM12	Q04235	462 aa		5.34	□□□□□ -1.55
NUD1	YOR373W	BCH1	Q05029	724 aa		5.34	□□□□□ -1.55
NUD1	YOR373W	YLR030W	Q07967	263 aa		5.34	□□□□□ -1.55
NUD1	YOR373W	NUS1	Q12063	375 aa		5.34	□□□□□ -1.55
NUD1	YOR373W	CMC2	Q3E7A4	109 aa		5.34	□□□□□ -1.55
NUD1	YOR373W	TEF1	P02994	458 aa	Known RBP	5.34	□□□□□ -1.55
NUD1	YOR373W	RPL6B	P05739	176 aa	Known RBP	5.34	□□□□□ -1.55
NUD1	YOR373W	RPS31	P05759	152 aa	Known RBP	5.34	□□□□□ -1.55
NUD1	YOR373W	PRP2	P20095	876 aa	Predicted RBP	5.34	□□□□□ -1.55
NUD1	YOR373W	CDC13	P32797	924 aa	Known RBP	5.34	□□□□□ -1.55
NUD1	YOR373W	YHR033W	P38690	423 aa		5.34	□□□□□ -1.55
NUD1	YOR373W	GIC1	P38785	314 aa		5.34	□□□□□ -1.55
NUD1	YOR373W	YPS6	P40583	537 aa		5.34	□□□□□ -1.55
NUD1	YOR373W	MID1	P41821	548 aa		5.34	□□□□□ -1.55
NUD1	YOR373W	ELP2	P42935	788 aa		5.34	□□□□□ -1.55
NUD1	YOR373W	CIS3	P47001	227 aa		5.34	□□□□□ -1.55
NUD1	YOR373W	RPL6A	Q02326	176 aa	Known RBP	5.34	□□□□□ -1.55
NUD1	YOR373W	RNT1	Q02555	471 aa		5.34	□□□□□ -1.55
NUD1	YOR373W	NDL1	Q06568	189 aa		5.34	□□□□□ -1.55
NUD1	YOR373W	ICT1	Q12385	394 aa		5.34	□□□□□ -1.55
NUD1	YOR373W	MOD5	P07884	428 aa		5.33	□□□□□ -1.56
NUD1	YOR373W	TY1A-LR4	P0C2I8	440 aa	Known RBP	5.33	□□□□□ -1.56
NUD1	YOR373W	YAR066W	P0CX18	203 aa		5.33	□□□□□ -1.56
NUD1	YOR373W	YHR214W	P0CX19	203 aa		5.33	□□□□□ -1.56
NUD1	YOR373W	TY1A-DR6	P0CX70	440 aa		5.33	□□□□□ -1.56
NUD1	YOR373W	TY1A-ER1	P0CX71	440 aa		5.33	□□□□□ -1.56
NUD1	YOR373W	TY1A-LR2	P0CX72	440 aa		5.33	□□□□□ -1.56
NUD1	YOR373W	TY1A-PL	P0CX73	440 aa		5.33	□□□□□ -1.56
NUD1	YOR373W	TY1A-JR1	P0CX74	440 aa		5.33	□□□□□ -1.56
NUD1	YOR373W	TY1A-LR3	P0CX75	440 aa		5.33	□□□□□ -1.56
NUD1	YOR373W	TY1A-ML2	P0CX76	440 aa		5.33	□□□□□ -1.56
NUD1	YOR373W	SNF5	P18480	905 aa		5.33	□□□□□ -1.56
NUD1	YOR373W	NFS1	P25374	497 aa		5.33	□□□□□ -1.56
NUD1	YOR373W	PDR3	P33200	976 aa		5.33	□□□□□ -1.56
NUD1	YOR373W	SKT5	P34226	696 aa		5.33	□□□□□ -1.56
NUD1	YOR373W	SEF1	P34228	1148 aa		5.33	□□□□□ -1.56
NUD1	YOR373W	TAF14	P35189	244 aa		5.33	□□□□□ -1.56
NUD1	YOR373W	SSO2	P39926	295 aa		5.33	□□□□□ -1.56
NUD1	YOR373W	YER085C	P40058	173 aa		5.33	□□□□□ -1.56
NUD1	YOR373W	PFK26	P40433	827 aa	Known RBP	5.33	□□□□□ -1.56
NUD1	YOR373W	ABM1	P47146	123 aa		5.33	□□□□□ -1.56
NUD1	YOR373W	BIO3	P50277	480 aa		5.33	□□□□□ -1.56
NUD1	YOR373W	BUD32	P53323	261 aa		5.33	□□□□□ -1.56
NUD1	YOR373W	YNR071C	P53757	342 aa		5.33	□□□□□ -1.56
NUD1	YOR373W	YMR102C	Q03177	834 aa		5.33	□□□□□ -1.56
NUD1	YOR373W	YMR210W	Q03649	449 aa		5.33	□□□□□ -1.56
NUD1	YOR373W	ATC1	Q04005	294 aa		5.33	□□□□□ -1.56
NUD1	YOR373W	RTT103	Q05543	409 aa		5.33	□□□□□ -1.56
NUD1	YOR373W	TY1A-GR1	Q12085	440 aa		5.33	□□□□□ -1.56
NUD1	YOR373W	RRP42	Q12277	265 aa	Predicted RBP	5.33	□□□□□ -1.56
NUD1	YOR373W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	5.33	□□□□□ -1.56
NUD1	YOR373W	YBR182C-A	Q8TGU6	64 aa		5.33	□□□□□ -1.56
NUD1	YOR373W	TY1A-OL	Q92392	440 aa	Known RBP	5.33	□□□□□ -1.56
NUD1	YOR373W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	5.33	□□□□□ -1.56	not detected
NUD1	YOR373W	FAR1	P21268	830 aa		5.33	□□□□□ -1.56
NUD1	YOR373W	YCR016W	P25617	290 aa	Known RBP	5.33	□□□□□ -1.56
NUD1	YOR373W	DGR2	P32330	852 aa		5.33	□□□□□ -1.56
NUD1	YOR373W	GDA1	P32621	518 aa		5.33	□□□□□ -1.56
NUD1	YOR373W	THI2	P38141	450 aa		5.33	□□□□□ -1.56
NUD1	YOR373W	ALG14	P38242	237 aa		5.33	□□□□□ -1.56
NUD1	YOR373W	SLZ1	P40167	298 aa		5.33	□□□□□ -1.56
NUD1	YOR373W	OSH6	Q02201	448 aa		5.33	□□□□□ -1.56
NUD1	YOR373W	NHP10	Q03435	203 aa		5.33	□□□□□ -1.56
NUD1	YOR373W	COX17	Q12287	69 aa		5.33	□□□□□ -1.56
NUD1	YOR373W	SUL2	Q12325	893 aa		5.33	□□□□□ -1.56
NUD1	YOR373W	RKM5	Q12367	367 aa		5.33	□□□□□ -1.56
NUD1	YOR373W	RRP12	Q12754	1228 aa	Known RBP	5.33	□□□□□ -1.56
NUD1	YOR373W	AMD1	P15274	810 aa	Known RBP	5.32	□□□□□ -1.56
NUD1	YOR373W	YPK2	P18961	677 aa		5.32	□□□□□ -1.56
NUD1	YOR373W	DAL82	P21705	255 aa		5.32	□□□□□ -1.56
NUD1	YOR373W	SEC15	P22224	910 aa		5.32	□□□□□ -1.56
NUD1	YOR373W	WBP1	P33767	430 aa	Known RBP	5.32	□□□□□ -1.56
NUD1	YOR373W	YKL070W	P36087	169 aa		5.32	□□□□□ -1.56
NUD1	YOR373W	YBL029W	P38201	376 aa		5.32	□□□□□ -1.56
NUD1	YOR373W	SPC97	P38863	823 aa		5.32	□□□□□ -1.56
NUD1	YOR373W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	5.32	□□□□□ -1.56	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 48.8 ms