RNA–Protein interactions for RNA: YJL154C

VPS35, Transcript of Endosomal subunit of membrane-associated retromer complex, yeastyeast

Gene VPS35, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS35YJL154C SPT7P35177 1332 aa2.01□□□□□ -2.09
VPS35YJL154C SAM1P10659 382 aaKnown RBP2.01□□□□□ -2.09
VPS35YJL154C ATR1P13090 542 aa2.01□□□□□ -2.09
VPS35YJL154C PMR1P13586 950 aa2.01□□□□□ -2.09
VPS35YJL154C CPR1P14832 162 aaKnown RBP2.01□□□□□ -2.09
VPS35YJL154C SAM2P19358 384 aaKnown RBP2.01□□□□□ -2.09
VPS35YJL154C SIN4P32259 974 aa2.01□□□□□ -2.09
VPS35YJL154C LRP1P38801 184 aaKnown RBP2.01□□□□□ -2.09
VPS35YJL154C RPH1P39956 796 aa2.01□□□□□ -2.09
VPS35YJL154C SAS2P40963 338 aa2.01□□□□□ -2.09
VPS35YJL154C TRS85P46944 698 aa2.01□□□□□ -2.09
VPS35YJL154C ODC1Q03028 310 aa2.01□□□□□ -2.09
VPS35YJL154C SGT1Q08446 395 aa2.01□□□□□ -2.09
VPS35YJL154C PKH2Q12236 1081 aaKnown RBP2.01□□□□□ -2.09
VPS35YJL154C CDC23P16522 626 aa2□□□□□ -2.09
VPS35YJL154C SOR1P35497 357 aaKnown RBP2□□□□□ -2.09
VPS35YJL154C OLA1P38219 394 aaKnown RBP2□□□□□ -2.09
VPS35YJL154C PES4P39684 611 aa2□□□□□ -2.09
VPS35YJL154C SEC28P40509 296 aaKnown RBP2□□□□□ -2.09
VPS35YJL154C AVT4P50944 713 aa2□□□□□ -2.09
VPS35YJL154C RPT4P53549 437 aaKnown RBP2□□□□□ -2.09
VPS35YJL154C MRP51Q02950 344 aa2□□□□□ -2.09
VPS35YJL154C SOR2Q07786 357 aa2□□□□□ -2.09
VPS35YJL154C SPE3Q12074 293 aaKnown RBP2□□□□□ -2.09
VPS35YJL154C BUG1Q12191 341 aa2□□□□□ -2.09
VPS35YJL154C SCEIP03882 235 aa2□□□□□ -2.09
VPS35YJL154C RPL15AP05748 204 aaKnown RBP2□□□□□ -2.09
VPS35YJL154C GDH1P07262 454 aaKnown RBP2□□□□□ -2.09
VPS35YJL154C SPO12P17123 173 aa2□□□□□ -2.09
VPS35YJL154C PUT3P25502 979 aaPredicted RBP2□□□□□ -2.09
VPS35YJL154C RIM1P32445 135 aaKnown RBP2□□□□□ -2.09
VPS35YJL154C GLC7P32598 312 aaKnown RBP2□□□□□ -2.09
VPS35YJL154C FAD1P38913 306 aa2□□□□□ -2.09
VPS35YJL154C CCT2P39076 527 aaKnown RBP2□□□□□ -2.09
VPS35YJL154C YMR147WP40218 223 aaKnown RBP2□□□□□ -2.09
VPS35YJL154C ERP1Q05359 219 aaKnown RBP2□□□□□ -2.09
VPS35YJL154C AYT1Q12226 474 aa2□□□□□ -2.09
VPS35YJL154C ISN1Q99312 450 aa2□□□□□ -2.09
VPS35YJL154C TOM1Q03280 3268 aa2□□□□□ -2.09
VPS35YJL154C SNF2P22082 1703 aa1.99□□□□□ -2.09
VPS35YJL154C MRP4P32902 394 aa1.99□□□□□ -2.09
VPS35YJL154C NAT2P37293 288 aa1.99□□□□□ -2.09
VPS35YJL154C PCA1P38360 1216 aa1.99□□□□□ -2.09
VPS35YJL154C WSS1P38838 269 aa1.99□□□□□ -2.09
VPS35YJL154C HAT2P39984 401 aa1.99□□□□□ -2.09
VPS35YJL154C MKT1P40850 830 aaKnown RBP1.99□□□□□ -2.09
VPS35YJL154C PHB2P50085 310 aa1.99□□□□□ -2.09
VPS35YJL154C SCS3P53012 380 aa1.99□□□□□ -2.09
VPS35YJL154C FRE4P53746 719 aa1.99□□□□□ -2.09
VPS35YJL154C WSC2P53832 503 aa1.99□□□□□ -2.09
VPS35YJL154C RPM2Q02773 1202 aa1.99□□□□□ -2.09
VPS35YJL154C YMR317WQ04893 1140 aa1.99□□□□□ -2.09
VPS35YJL154C TIM18Q08749 192 aa1.99□□□□□ -2.09
VPS35YJL154C GCN1P33892 2672 aaKnown RBP1.99□□□□□ -2.09
VPS35YJL154C CAT8P39113 1433 aa1.99□□□□□ -2.09
VPS35YJL154C TEF1P02994 458 aaKnown RBP1.99□□□□□ -2.09
VPS35YJL154C CDC21P06785 304 aa1.99□□□□□ -2.09
VPS35YJL154C LPD1P09624 499 aaKnown RBP1.99□□□□□ -2.09
VPS35YJL154C RNA1P11745 407 aaKnown RBP1.99□□□□□ -2.09
VPS35YJL154C SEC1P30619 724 aaKnown RBP1.99□□□□□ -2.09
VPS35YJL154C SWH1P35845 1188 aa1.99□□□□□ -2.09
VPS35YJL154C RRP4P38792 359 aaKnown RBP1.99□□□□□ -2.09
VPS35YJL154C WWM1P43582 211 aaKnown RBP1.99□□□□□ -2.09
VPS35YJL154C KTR5P53966 522 aaPredicted RBP1.99□□□□□ -2.09
VPS35YJL154C PEX25Q02969 394 aa1.99□□□□□ -2.09
VPS35YJL154C YDR341CQ05506 607 aaKnown RBP1.99□□□□□ -2.09
VPS35YJL154C YPR022CQ12139 1133 aa1.99□□□□□ -2.09
VPS35YJL154C GCN2P15442 1659 aa1.99□□□□□ -2.09
VPS35YJL154C HSP82P02829 709 aaKnown RBP1.99□□□□□ -2.09
VPS35YJL154C MCK1P21965 375 aaKnown RBP1.99□□□□□ -2.09
VPS35YJL154C RAD57P25301 460 aa1.99□□□□□ -2.09
VPS35YJL154C TIP1P27654 210 aaPredicted RBP1.99□□□□□ -2.09
VPS35YJL154C HEL1P36113 551 aa1.99□□□□□ -2.09
VPS35YJL154C FMP46P36141 133 aaKnown RBP1.99□□□□□ -2.09
VPS35YJL154C ATP3P38077 311 aaKnown RBP1.99□□□□□ -2.09
VPS35YJL154C RIB5P38145 238 aa1.99□□□□□ -2.09
VPS35YJL154C ZTA1P38230 334 aaKnown RBP1.99□□□□□ -2.09
VPS35YJL154C VHS2P40463 436 aa1.99□□□□□ -2.09
VPS35YJL154C EFM4P40516 257 aa1.99□□□□□ -2.09
VPS35YJL154C RPR2P40571 144 aa1.99□□□□□ -2.09
VPS35YJL154C BRO1P48582 844 aa1.99□□□□□ -2.09
VPS35YJL154C ALF1P53904 254 aa1.99□□□□□ -2.09
VPS35YJL154C PLP2Q12017 286 aa1.99□□□□□ -2.09
VPS35YJL154C RPN5Q12250 445 aaKnown RBP1.99□□□□□ -2.09
VPS35YJL154C YDR061WQ12298 539 aa1.99□□□□□ -2.09
VPS35YJL154C RPL6BP05739 176 aaKnown RBP1.98□□□□□ -2.09
VPS35YJL154C LSB5P25369 354 aa1.98□□□□□ -2.09
VPS35YJL154C SMY1P32364 656 aaKnown RBP1.98□□□□□ -2.09
VPS35YJL154C RXT2P38255 430 aa1.98□□□□□ -2.09
VPS35YJL154C MEP1P40260 492 aa1.98□□□□□ -2.09
VPS35YJL154C SEC27P41811 889 aaKnown RBP1.98□□□□□ -2.09
VPS35YJL154C GOR1P53839 350 aa1.98□□□□□ -2.09
VPS35YJL154C IBD2P53892 351 aa1.98□□□□□ -2.09
VPS35YJL154C RPL6AQ02326 176 aaKnown RBP1.98□□□□□ -2.09
VPS35YJL154C RSN1Q03516 953 aa1.98□□□□□ -2.09
VPS35YJL154C TAF12Q03761 539 aa1.98□□□□□ -2.09
VPS35YJL154C RKM1Q08961 583 aaPredicted RBP1.98□□□□□ -2.09
VPS35YJL154C DST1P07273 309 aa1.98□□□□□ -2.09
VPS35YJL154C MRS3P10566 314 aa1.98□□□□□ -2.09
VPS35YJL154C YCR022CP25620 114 aa1.98□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 298.9 ms