RNA–Protein interactions for RNA: YDL111C

RRP42, Transcript of Exosome non-catalytic core component, yeast

Gene RRP42, Length 798 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRP42	YDL111C	YCR100C	P25606	316 aa		3.2	□□□□□ -1.9
RRP42	YDL111C	DAL80	P26343	269 aa		3.2	□□□□□ -1.9
RRP42	YDL111C	SIP2	P34164	415 aa	Known RBP	3.2	□□□□□ -1.9
RRP42	YDL111C	SPT10	P35208	640 aa		3.2	□□□□□ -1.9
RRP42	YDL111C	PCH2	P38126	564 aa		3.2	□□□□□ -1.9
RRP42	YDL111C	OSW5	P40219	148 aa		3.2	□□□□□ -1.9
RRP42	YDL111C	MKT1	P40850	830 aa	Known RBP	3.2	□□□□□ -1.9
RRP42	YDL111C	AZF1	P41696	914 aa		3.2	□□□□□ -1.9
RRP42	YDL111C	HST1	P53685	503 aa		3.2	□□□□□ -1.9
RRP42	YDL111C	YNR048W	P53740	393 aa		3.2	□□□□□ -1.9
RRP42	YDL111C	ARP5	P53946	755 aa		3.2	□□□□□ -1.9
RRP42	YDL111C	RPM2	Q02773	1202 aa		3.2	□□□□□ -1.9
RRP42	YDL111C	RLI1	Q03195	608 aa	Known RBP	3.2	□□□□□ -1.9
RRP42	YDL111C	URC2	Q04411	772 aa		3.2	□□□□□ -1.9
RRP42	YDL111C	SNT309	Q06091	175 aa	Predicted RBP	3.2	□□□□□ -1.9
RRP42	YDL111C	RRP9	Q06506	573 aa	Known RBP	3.2	□□□□□ -1.9
RRP42	YDL111C	DSE3	Q08729	430 aa		3.2	□□□□□ -1.9
RRP42	YDL111C	ORT1	Q12375	292 aa		3.2	□□□□□ -1.9
RRP42	YDL111C	RMD5	Q12508	421 aa		3.2	□□□□□ -1.9
RRP42	YDL111C	STE3	P06783	470 aa		3.19	□□□□□ -1.9
RRP42	YDL111C	RPC40	P07703	335 aa	Known RBP	3.19	□□□□□ -1.9
RRP42	YDL111C	IMA3	P0CW40	589 aa		3.19	□□□□□ -1.9
RRP42	YDL111C	IMA4	P0CW41	589 aa		3.19	□□□□□ -1.9
RRP42	YDL111C	THR4	P16120	514 aa	Known RBP	3.19	□□□□□ -1.9
RRP42	YDL111C	GLN3	P18494	730 aa		3.19	□□□□□ -1.9
RRP42	YDL111C	PSO2	P30620	661 aa		3.19	□□□□□ -1.9
RRP42	YDL111C	YIL152W	P40455	235 aa		3.19	□□□□□ -1.9
RRP42	YDL111C	MPS2	P53159	387 aa		3.19	□□□□□ -1.9
RRP42	YDL111C	FRE4	P53746	719 aa		3.19	□□□□□ -1.9
RRP42	YDL111C	ERV25	P54837	211 aa	Known RBP	3.19	□□□□□ -1.9
RRP42	YDL111C	STD1	Q02794	444 aa		3.19	□□□□□ -1.9
RRP42	YDL111C	MRP51	Q02950	344 aa		3.19	□□□□□ -1.9
RRP42	YDL111C	VTI1	Q04338	217 aa		3.19	□□□□□ -1.9
RRP42	YDL111C	IMA2	Q08295	589 aa		3.19	□□□□□ -1.9
RRP42	YDL111C	RNH203	Q12338	110 aa		3.19	□□□□□ -1.9
RRP42	YDL111C	RPL12A	P0CX53	165 aa	Known RBP	3.18	□□□□□ -1.9
RRP42	YDL111C	RPL12B	P0CX54	165 aa		3.18	□□□□□ -1.9
RRP42	YDL111C	TIP1	P27654	210 aa	Predicted RBP	3.18	□□□□□ -1.9
RRP42	YDL111C	SPP381	P38282	291 aa	Predicted RBP	3.18	□□□□□ -1.9
RRP42	YDL111C	STP2	P38704	541 aa		3.18	□□□□□ -1.9
RRP42	YDL111C	BET5	Q03630	159 aa		3.18	□□□□□ -1.9
RRP42	YDL111C	VPS20	Q04272	221 aa		3.18	□□□□□ -1.9
RRP42	YDL111C	SMA2	Q04658	369 aa		3.18	□□□□□ -1.9
RRP42	YDL111C	TIM18	Q08749	192 aa		3.18	□□□□□ -1.9
RRP42	YDL111C	MUM3	Q08750	479 aa		3.18	□□□□□ -1.9
RRP42	YDL111C	SRL2	Q12020	392 aa		3.18	□□□□□ -1.9
RRP42	YDL111C	YPR022C	Q12139	1133 aa		3.18	□□□□□ -1.9
RRP42	YDL111C	PKH2	Q12236	1081 aa	Known RBP	3.18	□□□□□ -1.9
RRP42	YDL111C	CEX1	Q12453	761 aa		3.18	□□□□□ -1.9
RRP42	YDL111C	CSR2	Q12734	1121 aa		3.18	□□□□□ -1.9
RRP42	YDL111C	TEF1	P02994	458 aa	Known RBP	3.17	□□□□□ -1.9
RRP42	YDL111C	ARF1	P11076	181 aa	Known RBP	3.17	□□□□□ -1.9
RRP42	YDL111C	GCD2	P12754	651 aa	Predicted RBP	3.17	□□□□□ -1.9
RRP42	YDL111C	SPO12	P17123	173 aa		3.17	□□□□□ -1.9
RRP42	YDL111C	SAG1	P20840	650 aa		3.17	□□□□□ -1.9
RRP42	YDL111C	SLM5	P25345	492 aa	Known RBP	3.17	□□□□□ -1.9
RRP42	YDL111C	PET18	P25362	215 aa		3.17	□□□□□ -1.9
RRP42	YDL111C	HMX1	P32339	317 aa		3.17	□□□□□ -1.9
RRP42	YDL111C	SSE1	P32589	693 aa	Known RBP	3.17	□□□□□ -1.9
RRP42	YDL111C	GLC7	P32598	312 aa	Known RBP	3.17	□□□□□ -1.9
RRP42	YDL111C	TRS65	P32893	560 aa		3.17	□□□□□ -1.9
RRP42	YDL111C	SKN1	P33336	771 aa		3.17	□□□□□ -1.9
RRP42	YDL111C	YBR056W	P38081	501 aa		3.17	□□□□□ -1.9
RRP42	YDL111C	LIN1	P38852	340 aa	Predicted RBP	3.17	□□□□□ -1.9
RRP42	YDL111C	SSO2	P39926	295 aa		3.17	□□□□□ -1.9
RRP42	YDL111C	HAT2	P39984	401 aa		3.17	□□□□□ -1.9
RRP42	YDL111C	SHO1	P40073	367 aa		3.17	□□□□□ -1.9
RRP42	YDL111C	MMF1	P40185	145 aa	Known RBP	3.17	□□□□□ -1.9
RRP42	YDL111C	GCD10	P41814	478 aa		3.17	□□□□□ -1.9
RRP42	YDL111C	LAM5	P43560	674 aa		3.17	□□□□□ -1.9
RRP42	YDL111C	IKS1	P47042	667 aa		3.17	□□□□□ -1.9
RRP42	YDL111C	ARK1	P53974	638 aa		3.17	□□□□□ -1.9
RRP42	YDL111C	HCR1	Q05775	265 aa	Known RBP	3.17	□□□□□ -1.9
RRP42	YDL111C	MSC3	Q05812	728 aa		3.17	□□□□□ -1.9
RRP42	YDL111C	ECM7	Q06200	448 aa		3.17	□□□□□ -1.9
RRP42	YDL111C	PEX27	Q08580	376 aa		3.17	□□□□□ -1.9
RRP42	YDL111C	CBP2	P03874	630 aa	Predicted RBP	3.16	□□□□□ -1.9
RRP42	YDL111C	CDC37	P06101	506 aa	Known RBP	3.16	□□□□□ -1.9
RRP42	YDL111C	RNR2	P09938	399 aa	Known RBP	3.16	□□□□□ -1.9
RRP42	YDL111C	MAS1	P10507	462 aa		3.16	□□□□□ -1.9
RRP42	YDL111C	SAM1	P10659	382 aa	Known RBP	3.16	□□□□□ -1.9
RRP42	YDL111C	ATR1	P13090	542 aa		3.16	□□□□□ -1.9
RRP42	YDL111C	MTF1	P14908	341 aa	Known RBP	3.16	□□□□□ -1.9
RRP42	YDL111C	DBP3	P20447	523 aa	Known RBP	3.16	□□□□□ -1.9
RRP42	YDL111C	COX13	P32799	129 aa		3.16	□□□□□ -1.9
RRP42	YDL111C	PTR2	P32901	601 aa		3.16	□□□□□ -1.9
RRP42	YDL111C	ATO2	P32907	282 aa		3.16	□□□□□ -1.9
RRP42	YDL111C	DOA1	P36037	715 aa		3.16	□□□□□ -1.9
RRP42	YDL111C	MRPL40	P36534	297 aa		3.16	□□□□□ -1.9
RRP42	YDL111C	ATP3	P38077	311 aa	Known RBP	3.16	□□□□□ -1.9
RRP42	YDL111C	ARC40	P38328	384 aa	Known RBP	3.16	□□□□□ -1.9
RRP42	YDL111C	YHR177W	P38867	453 aa		3.16	□□□□□ -1.9
RRP42	YDL111C	MST28	P39552	234 aa		3.16	□□□□□ -1.9
RRP42	YDL111C	RTT105	P40063	208 aa		3.16	□□□□□ -1.9
RRP42	YDL111C	ALG8	P40351	577 aa		3.16	□□□□□ -1.9
RRP42	YDL111C	SPG5	P42933	373 aa		3.16	□□□□□ -1.9
RRP42	YDL111C	RRT5	P43607	289 aa		3.16	□□□□□ -1.9
RRP42	YDL111C	STE24	P47154	453 aa		3.16	□□□□□ -1.9
RRP42	YDL111C	POP6	P53218	158 aa		3.16	□□□□□ -1.9
RRP42	YDL111C	RET3	P53600	189 aa		3.16	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms