RNA–Protein interactions for RNA: YBR280C

SAF1, Transcript of F-Box protein involved in proteasome-dependent degradation of Aah1p, yeast

Gene SAF1, Length 1,914 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SAF1	YBR280C	YJR154W	P47181	346 aa		4.18	□□□□□ -1.74
SAF1	YBR280C	GTR2	P53290	341 aa		4.18	□□□□□ -1.74
SAF1	YBR280C	GIS1	Q03833	894 aa		4.18	□□□□□ -1.74
SAF1	YBR280C	FAR10	Q06001	478 aa		4.18	□□□□□ -1.74
SAF1	YBR280C	TDA5	Q06417	326 aa	Known RBP	4.18	□□□□□ -1.74
SAF1	YBR280C	NTO1	Q12311	748 aa		4.18	□□□□□ -1.74
SAF1	YBR280C	TY4B-P	A0A0B7P3V8	1104 aa		4.17	□□□□□ -1.74
SAF1	YBR280C	CDC8	P00572	216 aa		4.17	□□□□□ -1.74
SAF1	YBR280C	YIM1	P28625	365 aa		4.17	□□□□□ -1.74
SAF1	YBR280C	SPO23	P33757	523 aa		4.17	□□□□□ -1.74
SAF1	YBR280C	MDJ1	P35191	511 aa		4.17	□□□□□ -1.74
SAF1	YBR280C	SNU114	P36048	1008 aa	Known RBP	4.17	□□□□□ -1.74
SAF1	YBR280C	TUL1	P36096	758 aa		4.17	□□□□□ -1.74
SAF1	YBR280C	SET3	P36124	751 aa		4.17	□□□□□ -1.74
SAF1	YBR280C	HSM3	P38348	480 aa		4.17	□□□□□ -1.74
SAF1	YBR280C	PZF1	P39933	429 aa		4.17	□□□□□ -1.74
SAF1	YBR280C	AIM22	P47051	409 aa		4.17	□□□□□ -1.74
SAF1	YBR280C	MON1	P53129	644 aa		4.17	□□□□□ -1.74
SAF1	YBR280C	CDH1	P53197	566 aa		4.17	□□□□□ -1.74
SAF1	YBR280C	TPC1	P53257	314 aa		4.17	□□□□□ -1.74
SAF1	YBR280C	YNL058C	P53947	316 aa		4.17	□□□□□ -1.74
SAF1	YBR280C	MOT3	P54785	490 aa	Known RBP	4.17	□□□□□ -1.74
SAF1	YBR280C	USA1	Q03714	838 aa		4.17	□□□□□ -1.74
SAF1	YBR280C	YMR111C	Q04461	462 aa	Predicted RBP	4.17	□□□□□ -1.74
SAF1	YBR280C	GLO2	Q05584	274 aa		4.17	□□□□□ -1.74
SAF1	YBR280C	HDA2	Q06629	674 aa		4.17	□□□□□ -1.74
SAF1	YBR280C	YLR053C	Q12026	108 aa		4.17	□□□□□ -1.74
SAF1	YBR280C	MMP1	Q12372	583 aa		4.17	□□□□□ -1.74
SAF1	YBR280C	TAD3	Q9URQ3	322 aa		4.17	□□□□□ -1.74
SAF1	YBR280C	ARF1	P11076	181 aa	Known RBP	4.17	□□□□□ -1.74
SAF1	YBR280C	CBS2	P14905	389 aa		4.17	□□□□□ -1.74
SAF1	YBR280C	SYP1	P25623	870 aa	Known RBP	4.17	□□□□□ -1.74
SAF1	YBR280C	MTR2	P34232	184 aa	Known RBP	4.17	□□□□□ -1.74
SAF1	YBR280C	SPP381	P38282	291 aa	Predicted RBP	4.17	□□□□□ -1.74
SAF1	YBR280C	FAD1	P38913	306 aa		4.17	□□□□□ -1.74
SAF1	YBR280C	YIL067C	P40514	678 aa		4.17	□□□□□ -1.74
SAF1	YBR280C	LSC1	P53598	329 aa	Known RBP	4.17	□□□□□ -1.74
SAF1	YBR280C	DMA2	P53924	522 aa		4.17	□□□□□ -1.74
SAF1	YBR280C	RHO4	Q00246	291 aa		4.17	□□□□□ -1.74
SAF1	YBR280C	NUP116	Q02630	1113 aa		4.17	□□□□□ -1.74
SAF1	YBR280C	PLB2	Q03674	706 aa		4.17	□□□□□ -1.74
SAF1	YBR280C	PLM2	Q04383	521 aa		4.17	□□□□□ -1.74
SAF1	YBR280C	SMA2	Q04658	369 aa		4.17	□□□□□ -1.74
SAF1	YBR280C	FRA1	Q07825	749 aa		4.17	□□□□□ -1.74
SAF1	YBR280C	YOL019W	Q08157	551 aa		4.17	□□□□□ -1.74
SAF1	YBR280C	SFG1	Q12507	346 aa		4.17	□□□□□ -1.74
SAF1	YBR280C	YKL033W-A	Q86ZR7	236 aa		4.17	□□□□□ -1.74
SAF1	YBR280C	CDC39	P25655	2108 aa	Known RBP	4.16	□□□□□ -1.74
SAF1	YBR280C	RHO2	P06781	192 aa		4.16	□□□□□ -1.74
SAF1	YBR280C	ALG7	P07286	448 aa		4.16	□□□□□ -1.74
SAF1	YBR280C	ILV2	P07342	687 aa	Known RBP	4.16	□□□□□ -1.74
SAF1	YBR280C	ERD1	P16151	362 aa		4.16	□□□□□ -1.74
SAF1	YBR280C	RPB5	P20434	215 aa		4.16	□□□□□ -1.74
SAF1	YBR280C	OCA4	P25366	362 aa		4.16	□□□□□ -1.74
SAF1	YBR280C	CWH43	P25618	953 aa		4.16	□□□□□ -1.74
SAF1	YBR280C	YME1	P32795	747 aa		4.16	□□□□□ -1.74
SAF1	YBR280C	SSO1	P32867	290 aa		4.16	□□□□□ -1.74
SAF1	YBR280C	LOT5	P34234	306 aa		4.16	□□□□□ -1.74
SAF1	YBR280C	TPO5	P36029	618 aa		4.16	□□□□□ -1.74
SAF1	YBR280C	MAL32	P38158	584 aa		4.16	□□□□□ -1.74
SAF1	YBR280C	APD1	P38281	316 aa		4.16	□□□□□ -1.74
SAF1	YBR280C	COS111	P38308	924 aa		4.16	□□□□□ -1.74
SAF1	YBR280C	AST2	P39945	430 aa	Known RBP	4.16	□□□□□ -1.74
SAF1	YBR280C	MET18	P40469	1032 aa		4.16	□□□□□ -1.74
SAF1	YBR280C	PSA1	P41940	361 aa	Known RBP	4.16	□□□□□ -1.74
SAF1	YBR280C	MAD3	P47074	515 aa		4.16	□□□□□ -1.74
SAF1	YBR280C	PGU1	P47180	361 aa		4.16	□□□□□ -1.74
SAF1	YBR280C	YPL071C	Q02864	156 aa		4.16	□□□□□ -1.74
SAF1	YBR280C	PUN1	Q06991	263 aa		4.16	□□□□□ -1.74
SAF1	YBR280C	NCE102	Q12207	173 aa	RIP-Chip data	4.16	□□□□□ -1.74	not detected
SAF1	YBR280C	PSF1	Q12488	208 aa		4.16	□□□□□ -1.74
SAF1	YBR280C	SKS1	Q12505	502 aa		4.16	□□□□□ -1.74
SAF1	YBR280C	HSC82	P15108	705 aa	Known RBP	4.15	□□□□□ -1.74
SAF1	YBR280C	SAC7	P17121	654 aa		4.15	□□□□□ -1.74
SAF1	YBR280C	HSP150	P32478	413 aa		4.15	□□□□□ -1.74
SAF1	YBR280C	RIM2	P38127	377 aa		4.15	□□□□□ -1.74
SAF1	YBR280C	BZZ1	P38822	633 aa		4.15	□□□□□ -1.74
SAF1	YBR280C	AIM2	P39721	246 aa		4.15	□□□□□ -1.74
SAF1	YBR280C	SMX2	P40204	77 aa	Known RBP	4.15	□□□□□ -1.74
SAF1	YBR280C	PRP31	P49704	494 aa	Predicted RBP	4.15	□□□□□ -1.74
SAF1	YBR280C	KEL2	P50090	882 aa		4.15	□□□□□ -1.74
SAF1	YBR280C	MAL13	P53338	473 aa		4.15	□□□□□ -1.74
SAF1	YBR280C	CUZ1	P53899	274 aa		4.15	□□□□□ -1.74
SAF1	YBR280C	DCR2	Q05924	578 aa		4.15	□□□□□ -1.74
SAF1	YBR280C	GMC2	Q06201	188 aa		4.15	□□□□□ -1.74
SAF1	YBR280C	VHS3	Q08438	674 aa		4.15	□□□□□ -1.74
SAF1	YBR280C	RRG7	Q08774	242 aa	Predicted RBP	4.15	□□□□□ -1.74
SAF1	YBR280C	RDR1	Q08904	546 aa		4.15	□□□□□ -1.74
SAF1	YBR280C	FDH1	Q08911	376 aa		4.15	□□□□□ -1.74
SAF1	YBR280C	CDC36	P06100	191 aa	Predicted RBP	4.15	□□□□□ -1.75
SAF1	YBR280C	YHR214C-D	P0CX93	97 aa		4.15	□□□□□ -1.75
SAF1	YBR280C	DAT1	P13483	248 aa	Known RBP	4.15	□□□□□ -1.75
SAF1	YBR280C	NCP1	P16603	691 aa	Known RBP	4.15	□□□□□ -1.75
SAF1	YBR280C	AAC3	P18238	307 aa		4.15	□□□□□ -1.75
SAF1	YBR280C	MCK1	P21965	375 aa	Known RBP	4.15	□□□□□ -1.75
SAF1	YBR280C	SEC61	P32915	480 aa		4.15	□□□□□ -1.75
SAF1	YBR280C	DLD3	P39976	496 aa	Known RBP	4.15	□□□□□ -1.75
SAF1	YBR280C	RCF2	P53721	224 aa		4.15	□□□□□ -1.75
SAF1	YBR280C	SLM2	P53955	656 aa		4.15	□□□□□ -1.75
SAF1	YBR280C	IRC15	Q02733	499 aa		4.15	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms