RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 PPP4R3AQ6IN85 833 aa19.39■□□□□ 0.69
PHGDH-234ENST00000642041 IQUBQ8NA54 791 aa19.39■□□□□ 0.69
PHGDH-234ENST00000642041 CNNM3Q8NE01 707 aa19.39■□□□□ 0.69
PHGDH-234ENST00000642041 GPKOWQ92917 476 aaPredicted RBP eCLIP19.39■□□□□ 0.69
PHGDH-234ENST00000642041 CUEDC2Q9H467 287 aa19.39■□□□□ 0.69
PHGDH-234ENST00000642041 MAGEF1Q9HAY2 307 aa19.39■□□□□ 0.69
PHGDH-234ENST00000642041 IL23AQ9NPF7 189 aa19.39■□□□□ 0.69
PHGDH-234ENST00000642041 CCDC39Q9UFE4 941 aa19.39■□□□□ 0.69
PHGDH-234ENST00000642041 FRMPD2Q68DX3 1309 aaPredicted RBP19.39■□□□□ 0.69
PHGDH-234ENST00000642041 ZNFX1Q9P2E3 1918 aaKnown RBP19.39■□□□□ 0.69
PHGDH-234ENST00000642041 BAZ2BQ9UIF8 2168 aaKnown RBP19.39■□□□□ 0.69
PHGDH-234ENST00000642041 SMC2O95347 1197 aa19.38■□□□□ 0.69
PHGDH-234ENST00000642041 AKR1A1P14550 325 aa19.38■□□□□ 0.69
PHGDH-234ENST00000642041 CDK7P50613 346 aa19.38■□□□□ 0.69
PHGDH-234ENST00000642041 IKQ13123 557 aaPredicted RBP19.38■□□□□ 0.69
PHGDH-234ENST00000642041 HS1BP3Q53T59 392 aa19.38■□□□□ 0.69
PHGDH-234ENST00000642041 SHC4Q6S5L8 630 aa19.38■□□□□ 0.69
PHGDH-234ENST00000642041 CEP57L1Q8IYX8 460 aa19.38■□□□□ 0.69
PHGDH-234ENST00000642041 PCDHA1Q9Y5I3 950 aa19.38■□□□□ 0.69
PHGDH-234ENST00000642041 PRR33A8MZF0 331 aa19.37■□□□□ 0.69
PHGDH-234ENST00000642041 FGBP02675 491 aa19.37■□□□□ 0.69
PHGDH-234ENST00000642041 ZNF865P0CJ78 1059 aaPredicted RBP19.37■□□□□ 0.69
PHGDH-234ENST00000642041 CDC37Q16543 378 aaPredicted RBP19.37■□□□□ 0.69
PHGDH-234ENST00000642041 TMEM266Q2M3C6 531 aa19.37■□□□□ 0.69
PHGDH-234ENST00000642041 PPP2R2DQ66LE6 453 aa19.37■□□□□ 0.69
PHGDH-234ENST00000642041 KRBA2Q6ZNG9 492 aa19.37■□□□□ 0.69
PHGDH-234ENST00000642041 KCTD1Q719H9 257 aa19.37■□□□□ 0.69
PHGDH-234ENST00000642041 NCAPG2Q86XI2 1143 aa19.37■□□□□ 0.69
PHGDH-234ENST00000642041 KCTD17Q8N5Z5 321 aa19.37■□□□□ 0.69
PHGDH-234ENST00000642041 MB21D1Q8N884 522 aa19.37■□□□□ 0.69
PHGDH-234ENST00000642041 KLHDC9Q8NEP7 349 aa19.37■□□□□ 0.69
PHGDH-234ENST00000642041 PIBF1Q8WXW3 757 aa19.37■□□□□ 0.69
PHGDH-234ENST00000642041 BPIFA3Q9BQP9 254 aa19.37■□□□□ 0.69
PHGDH-234ENST00000642041 TINF2Q9BSI4 451 aa19.37■□□□□ 0.69
PHGDH-234ENST00000642041 RBSNQ9H1K0 784 aa19.37■□□□□ 0.69
PHGDH-234ENST00000642041 MTCH2Q9Y6C9 303 aa19.37■□□□□ 0.69
PHGDH-234ENST00000642041 LRRC37A2A6NM11 1700 aa19.37■□□□□ 0.69
PHGDH-234ENST00000642041 SMTNL1A8MU46 457 aa19.36■□□□□ 0.69
PHGDH-234ENST00000642041 TMEM232C9JQI7 657 aa19.36■□□□□ 0.69
PHGDH-234ENST00000642041 GTPBP6O43824 516 aaPredicted RBP19.36■□□□□ 0.69
PHGDH-234ENST00000642041 FCER1AP12319 257 aa19.36■□□□□ 0.69
PHGDH-234ENST00000642041 TAL1P17542 331 aaPredicted RBP19.36■□□□□ 0.69
PHGDH-234ENST00000642041 ATP2B1P20020 1258 aa19.36■□□□□ 0.69
PHGDH-234ENST00000642041 PDIA5Q14554 519 aa19.36■□□□□ 0.69
PHGDH-234ENST00000642041 ZNF174Q15697 407 aa19.36■□□□□ 0.69
PHGDH-234ENST00000642041 KCNA10Q16322 511 aa19.36■□□□□ 0.69
PHGDH-234ENST00000642041 CAMK4Q16566 473 aa19.36■□□□□ 0.69
PHGDH-234ENST00000642041 CCSAPQ6IQ19 270 aaPredicted RBP19.36■□□□□ 0.69
PHGDH-234ENST00000642041 RASGRP2Q7LDG7 609 aa19.36■□□□□ 0.69
PHGDH-234ENST00000642041 SPICE1Q8N0Z3 855 aa19.36■□□□□ 0.69
PHGDH-234ENST00000642041 TRIM44Q96DX7 344 aaPredicted RBP19.36■□□□□ 0.69
PHGDH-234ENST00000642041 PPP1R9BQ96SB3 815 aa19.36■□□□□ 0.69
PHGDH-234ENST00000642041 LRRC27Q9C0I9 530 aa19.36■□□□□ 0.69
PHGDH-234ENST00000642041 GOLPH3LQ9H4A5 285 aa19.36■□□□□ 0.69
PHGDH-234ENST00000642041 MRPL11Q9Y3B7 192 aaKnown RBP19.36■□□□□ 0.69
PHGDH-234ENST00000642041 GOLGA6L19H0YKK7 550 aa19.35■□□□□ 0.69
PHGDH-234ENST00000642041 PIK3CDO00329 1044 aa19.35■□□□□ 0.69
PHGDH-234ENST00000642041 CLK2P49760 499 aaKnown RBP19.35■□□□□ 0.69
PHGDH-234ENST00000642041 DHX8Q14562 1220 aaKnown RBP19.35■□□□□ 0.69
PHGDH-234ENST00000642041 SLC35G1Q2M3R5 365 aa19.35■□□□□ 0.69
PHGDH-234ENST00000642041 QRICH1Q2TAL8 776 aa19.35■□□□□ 0.69
PHGDH-234ENST00000642041 FAM83BQ5T0W9 1011 aa19.35■□□□□ 0.69
PHGDH-234ENST00000642041 LENG1Q96BZ8 264 aaPredicted RBP19.35■□□□□ 0.69
PHGDH-234ENST00000642041 GLT1D1Q96MS3 346 aa19.35■□□□□ 0.69
PHGDH-234ENST00000642041 PPP1R12CQ9BZL4 782 aa19.35■□□□□ 0.69
PHGDH-234ENST00000642041 CCSER1Q9C0I3 900 aa19.35■□□□□ 0.69
PHGDH-234ENST00000642041 DIS3Q9Y2L1 958 aaKnown RBP19.35■□□□□ 0.69
PHGDH-234ENST00000642041 PCDHA11Q9Y5I1 949 aa19.35■□□□□ 0.69
PHGDH-234ENST00000642041 ABCB11O95342 1321 aa19.34■□□□□ 0.69
PHGDH-234ENST00000642041 SYNRGQ9UMZ2 1314 aa19.34■□□□□ 0.69
PHGDH-234ENST00000642041 NEMFO60524 1076 aa19.34■□□□□ 0.69
PHGDH-234ENST00000642041 TPM3P06753 285 aa19.34■□□□□ 0.69
PHGDH-234ENST00000642041 OR52Z1P0C646 297 aa19.34■□□□□ 0.69
PHGDH-234ENST00000642041 SLFN14P0C7P3 912 aa19.34■□□□□ 0.69
PHGDH-234ENST00000642041 MCM7P33993 719 aa19.34■□□□□ 0.69
PHGDH-234ENST00000642041 ZNF165P49910 485 aa19.34■□□□□ 0.69
PHGDH-234ENST00000642041 RABGGTBP53611 331 aa19.34■□□□□ 0.69
PHGDH-234ENST00000642041 PLS1Q14651 629 aa19.34■□□□□ 0.69
PHGDH-234ENST00000642041 TYW1BQ6NUM6 668 aa19.34■□□□□ 0.69
PHGDH-234ENST00000642041 PRPF38AQ8NAV1 312 aaKnown RBP19.34■□□□□ 0.69
PHGDH-234ENST00000642041 HLA-CQ95604 372 aa19.34■□□□□ 0.69
PHGDH-234ENST00000642041 NUP88Q99567 741 aaPredicted RBP19.34■□□□□ 0.69
PHGDH-234ENST00000642041 CSRNP2Q9H175 543 aa19.34■□□□□ 0.69
PHGDH-234ENST00000642041 TUBE1Q9UJT0 475 aa19.34■□□□□ 0.69
PHGDH-234ENST00000642041 WDFY4Q6ZS81 3184 aa19.34■□□□□ 0.69
PHGDH-234ENST00000642041 SPDYE3A6NKU9 549 aa19.33■□□□□ 0.68
PHGDH-234ENST00000642041 BECN2A8MW95 431 aa19.33■□□□□ 0.68
PHGDH-234ENST00000642041 ARVCFO00192 962 aa19.33■□□□□ 0.68
PHGDH-234ENST00000642041 TBX3O15119 743 aa19.33■□□□□ 0.68
PHGDH-234ENST00000642041 UBA7P41226 1012 aa19.33■□□□□ 0.68
PHGDH-234ENST00000642041 NLRP12P59046 1061 aa19.33■□□□□ 0.68
PHGDH-234ENST00000642041 NHLH1Q02575 133 aa19.33■□□□□ 0.68
PHGDH-234ENST00000642041 INF2Q27J81 1249 aa19.33■□□□□ 0.68
PHGDH-234ENST00000642041 TPRNQ4KMQ1 711 aa19.33■□□□□ 0.68
PHGDH-234ENST00000642041 TTBK2Q6IQ55 1244 aa19.33■□□□□ 0.68
PHGDH-234ENST00000642041 MCF2L2Q86YR7 1114 aa19.33■□□□□ 0.68
PHGDH-234ENST00000642041 CKAP2LQ8IYA6 745 aa19.33■□□□□ 0.68
PHGDH-234ENST00000642041 TBCKQ8TEA7 893 aa19.33■□□□□ 0.68
PHGDH-234ENST00000642041 TANGO6Q9C0B7 1094 aa19.33■□□□□ 0.68
PHGDH-234ENST00000642041 PRR12Q9ULL5 1215 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms