RNA–Protein interactions for RNA: ENST00000639470.1

COLCA2-207, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best)

Gene COLCA2, Length 1,207 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-207ENST00000639470 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.76■□□□□ 0.59
COLCA2-207ENST00000639470 LMBR1Q8WVP7 490 aa18.76■□□□□ 0.59
COLCA2-207ENST00000639470 SENP7Q9BQF6 1050 aa18.76■□□□□ 0.59
COLCA2-207ENST00000639470 COL25A1Q9BXS0 654 aaPredicted RBP18.76■□□□□ 0.59
COLCA2-207ENST00000639470 JADE2Q9NQC1 790 aa18.76■□□□□ 0.59
COLCA2-207ENST00000639470 BARHL2Q9NY43 387 aa18.76■□□□□ 0.59
COLCA2-207ENST00000639470 CCT2P78371 535 aaKnown RBP18.75■□□□□ 0.59
COLCA2-207ENST00000639470 ARHGAP4P98171 946 aa18.75■□□□□ 0.59
COLCA2-207ENST00000639470 ITGB3BPQ13352 177 aaPredicted RBP18.75■□□□□ 0.59
COLCA2-207ENST00000639470 RASGRP4Q8TDF6 673 aa18.75■□□□□ 0.59
COLCA2-207ENST00000639470 USP26Q9BXU7 913 aa18.75■□□□□ 0.59
COLCA2-207ENST00000639470 PRUNE2Q8WUY3 3088 aa18.75■□□□□ 0.59
COLCA2-207ENST00000639470 UNC80Q8N2C7 3258 aa18.74■□□□□ 0.59
COLCA2-207ENST00000639470 CHD7Q9P2D1 2997 aa18.74■□□□□ 0.59
COLCA2-207ENST00000639470 CLK2P49760 499 aaKnown RBP18.74■□□□□ 0.59
COLCA2-207ENST00000639470 ADAM17P78536 824 aa18.74■□□□□ 0.59
COLCA2-207ENST00000639470 TAP1Q03518 808 aa18.74■□□□□ 0.59
COLCA2-207ENST00000639470 TOB2Q14106 344 aaPredicted RBP18.74■□□□□ 0.59
COLCA2-207ENST00000639470 PFKFB3Q16875 520 aaPredicted RBP18.74■□□□□ 0.59
COLCA2-207ENST00000639470 CNKSR3Q6P9H4 555 aa18.74■□□□□ 0.59
COLCA2-207ENST00000639470 MICALL1Q8N3F8 863 aa18.74■□□□□ 0.59
COLCA2-207ENST00000639470 DBF4BQ8NFT6 615 aa18.74■□□□□ 0.59
COLCA2-207ENST00000639470 SLC9A7Q96T83 725 aa18.74■□□□□ 0.59
COLCA2-207ENST00000639470 GAS2L1Q99501 681 aaPredicted RBP18.74■□□□□ 0.59
COLCA2-207ENST00000639470 MXRA8Q9BRK3 442 aa18.74■□□□□ 0.59
COLCA2-207ENST00000639470 UPF3BQ9BZI7 483 aaKnown RBP18.74■□□□□ 0.59
COLCA2-207ENST00000639470 KCNH7Q9NS40 1196 aa18.74■□□□□ 0.59
COLCA2-207ENST00000639470 PTPRSQ13332 1948 aa18.74■□□□□ 0.59
COLCA2-207ENST00000639470 A0A0C4DFX4 3053 aa18.73■□□□□ 0.59
COLCA2-207ENST00000639470 RSPH10B2B2RC85 870 aa18.73■□□□□ 0.59
COLCA2-207ENST00000639470 DDX39AO00148 427 aaKnown RBP18.73■□□□□ 0.59
COLCA2-207ENST00000639470 HMGB1P09429 215 aaKnown RBP18.73■□□□□ 0.59
COLCA2-207ENST00000639470 RSPH10BP0C881 870 aa18.73■□□□□ 0.59
COLCA2-207ENST00000639470 SCG2P13521 617 aa18.73■□□□□ 0.59
COLCA2-207ENST00000639470 NTRK3Q16288 839 aa18.73■□□□□ 0.59
COLCA2-207ENST00000639470 AGXT2Q9BYV1 514 aa18.73■□□□□ 0.59
COLCA2-207ENST00000639470 FAM86B1E9PN63 330 aa18.72■□□□□ 0.59
COLCA2-207ENST00000639470 LGR5O75473 907 aa18.72■□□□□ 0.59
COLCA2-207ENST00000639470 BAIAP3O94812 1187 aa18.72■□□□□ 0.59
COLCA2-207ENST00000639470 FAM86B2P0C5J1 330 aa18.72■□□□□ 0.59
COLCA2-207ENST00000639470 PDIA3P30101 505 aaKnown RBP18.72■□□□□ 0.59
COLCA2-207ENST00000639470 KCNJ6P48051 423 aa18.72■□□□□ 0.59
COLCA2-207ENST00000639470 IGBP1P78318 339 aa18.72■□□□□ 0.59
COLCA2-207ENST00000639470 MKRN4PQ13434 485 aaPredicted RBP18.72■□□□□ 0.59
COLCA2-207ENST00000639470 PPP1R18Q6NYC8 613 aa18.72■□□□□ 0.59
COLCA2-207ENST00000639470 TRAPPC12Q8WVT3 735 aa18.72■□□□□ 0.59
COLCA2-207ENST00000639470 ARNTL2Q8WYA1 636 aa18.72■□□□□ 0.59
COLCA2-207ENST00000639470 SEPT1Q8WYJ6 367 aa18.72■□□□□ 0.59
COLCA2-207ENST00000639470 TLL1O43897 1013 aa18.71■□□□□ 0.59
COLCA2-207ENST00000639470 REC8O95072 547 aa18.71■□□□□ 0.59
COLCA2-207ENST00000639470 CCNE2O96020 404 aa18.71■□□□□ 0.59
COLCA2-207ENST00000639470 NEFLP07196 543 aa18.71■□□□□ 0.59
COLCA2-207ENST00000639470 SREBF1P36956 1147 aa18.71■□□□□ 0.59
COLCA2-207ENST00000639470 MARCH8Q5T0T0 291 aa18.71■□□□□ 0.59
COLCA2-207ENST00000639470 GLG1Q92896 1179 aa18.71■□□□□ 0.59
COLCA2-207ENST00000639470 SLC26A6Q9BXS9 759 aa18.71■□□□□ 0.59
COLCA2-207ENST00000639470 AGO4Q9HCK5 861 aaKnown RBP18.71■□□□□ 0.59
COLCA2-207ENST00000639470 VPS54Q9P1Q0 977 aa18.71■□□□□ 0.59
COLCA2-207ENST00000639470 ZNF215Q9UL58 517 aaPredicted RBP18.71■□□□□ 0.59
COLCA2-207ENST00000639470 MTUS1Q9ULD2 1270 aa18.71■□□□□ 0.59
COLCA2-207ENST00000639470 NID2Q14112 1375 aa18.7■□□□□ 0.58
COLCA2-207ENST00000639470 EDIL3O43854 480 aa18.7■□□□□ 0.58
COLCA2-207ENST00000639470 CHRNA1P02708 482 aa18.7■□□□□ 0.58
COLCA2-207ENST00000639470 RCAN1P53805 252 aa18.7■□□□□ 0.58
COLCA2-207ENST00000639470 ACTR2P61160 394 aa18.7■□□□□ 0.58
COLCA2-207ENST00000639470 PPFIA1Q13136 1202 aa18.7■□□□□ 0.58
COLCA2-207ENST00000639470 GRIK4Q16099 956 aa18.7■□□□□ 0.58
COLCA2-207ENST00000639470 CEP55Q53EZ4 464 aa18.7■□□□□ 0.58
COLCA2-207ENST00000639470 PHOSPHO2Q8TCD6 241 aa18.7■□□□□ 0.58
COLCA2-207ENST00000639470 ZSWIM6Q9HCJ5 1215 aa18.7■□□□□ 0.58
COLCA2-207ENST00000639470 JPH1Q9HDC5 661 aaPredicted RBP18.7■□□□□ 0.58
COLCA2-207ENST00000639470 SLC9A2Q9UBY0 812 aa18.7■□□□□ 0.58
COLCA2-207ENST00000639470 MEIS1O00470 390 aa18.69■□□□□ 0.58
COLCA2-207ENST00000639470 PRPF3O43395 683 aaKnown RBP18.69■□□□□ 0.58
COLCA2-207ENST00000639470 STK3Q13188 491 aa18.69■□□□□ 0.58
COLCA2-207ENST00000639470 PLEKHG4Q58EX7 1191 aa18.69■□□□□ 0.58
COLCA2-207ENST00000639470 RUFY3Q7L099 469 aa18.69■□□□□ 0.58
COLCA2-207ENST00000639470 GIMAP8Q8ND71 665 aaPredicted RBP18.69■□□□□ 0.58
COLCA2-207ENST00000639470 CRYGNQ8WXF5 182 aa18.69■□□□□ 0.58
COLCA2-207ENST00000639470 CDHR1Q96JP9 859 aa18.69■□□□□ 0.58
COLCA2-207ENST00000639470 AIFM3Q96NN9 605 aa18.69■□□□□ 0.58
COLCA2-207ENST00000639470 ZBED2Q9BTP6 218 aa18.69■□□□□ 0.58
COLCA2-207ENST00000639470 EHMT1Q9H9B1 1298 aa18.69■□□□□ 0.58
COLCA2-207ENST00000639470 IGLV3-22A0A075B6J6 115 aa18.68■□□□□ 0.58
COLCA2-207ENST00000639470 ABHD14A-ACY1A0A1B0GW23 586 aa18.68■□□□□ 0.58
COLCA2-207ENST00000639470 GHRP10912 638 aa18.68■□□□□ 0.58
COLCA2-207ENST00000639470 INSRRP14616 1297 aa18.68■□□□□ 0.58
COLCA2-207ENST00000639470 IKBKEQ14164 716 aa18.68■□□□□ 0.58
COLCA2-207ENST00000639470 PLA2G4DQ86XP0 818 aa18.68■□□□□ 0.58
COLCA2-207ENST00000639470 MYOCDQ8IZQ8 938 aa18.68■□□□□ 0.58
COLCA2-207ENST00000639470 GDPD5Q8WTR4 605 aa18.68■□□□□ 0.58
COLCA2-207ENST00000639470 DNAJB3Q8WWF6 145 aa18.68■□□□□ 0.58
COLCA2-207ENST00000639470 ZMYND12Q9H0C1 365 aa18.68■□□□□ 0.58
COLCA2-207ENST00000639470 FAM49AQ9H0Q0 323 aaPredicted RBP18.68■□□□□ 0.58
COLCA2-207ENST00000639470 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.67■□□□□ 0.58
COLCA2-207ENST00000639470 hCG_1984214I3L0E3 225 aa18.67■□□□□ 0.58
COLCA2-207ENST00000639470 GJB5O95377 273 aa18.67■□□□□ 0.58
COLCA2-207ENST00000639470 FOSP01100 380 aaPredicted RBP18.67■□□□□ 0.58
COLCA2-207ENST00000639470 PSMA5P28066 241 aa18.67■□□□□ 0.58
COLCA2-207ENST00000639470 ZNF76P36508 570 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms