RNA–Protein interactions for RNA: ENST00000635120.1

CSMD1-218, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CSMD1, Length 11,737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-218ENST00000635120 CYTH2Q99418 400 aa9.83□□□□□ -0.84
CSMD1-218ENST00000635120 SPTLC3Q9NUV7 552 aa9.83□□□□□ -0.84
CSMD1-218ENST00000635120 RWDD2AQ9UIY3 292 aa9.83□□□□□ -0.84
CSMD1-218ENST00000635120 PCDHA13Q9Y5I0 950 aa9.83□□□□□ -0.84
CSMD1-218ENST00000635120 SCINQ9Y6U3 715 aa9.83□□□□□ -0.84
CSMD1-218ENST00000635120 CACNA1FO60840 1977 aa9.83□□□□□ -0.84
CSMD1-218ENST00000635120 LRRC41Q15345 812 aa9.83□□□□□ -0.84
CSMD1-218ENST00000635120 SMYD3Q9H7B4 428 aa9.83□□□□□ -0.84
CSMD1-218ENST00000635120 KMT5AQ9NQR1 393 aa9.83□□□□□ -0.84
CSMD1-218ENST00000635120 TLK1Q9UKI8 766 aa9.83□□□□□ -0.84
CSMD1-218ENST00000635120 PRPSAP2O60256 369 aa9.83□□□□□ -0.84
CSMD1-218ENST00000635120 YWHAHQ04917 246 aaPredicted RBP9.83□□□□□ -0.84
CSMD1-218ENST00000635120 SLMAPQ14BN4 828 aa9.83□□□□□ -0.84
CSMD1-218ENST00000635120 SLC39A14Q15043 492 aa9.83□□□□□ -0.84
CSMD1-218ENST00000635120 CACTINQ8WUQ7 758 aaKnown RBP9.83□□□□□ -0.84
CSMD1-218ENST00000635120 FAM8A1Q9UBU6 413 aa9.83□□□□□ -0.84
CSMD1-218ENST00000635120 OCRLQ01968 901 aa9.82□□□□□ -0.84
CSMD1-218ENST00000635120 CLIC2O15247 247 aa9.82□□□□□ -0.84
CSMD1-218ENST00000635120 FMNL1O95466 1100 aaPredicted RBP9.82□□□□□ -0.84
CSMD1-218ENST00000635120 UBXN2AP68543 259 aa9.82□□□□□ -0.84
CSMD1-218ENST00000635120 ASPRV1Q53RT3 343 aa9.82□□□□□ -0.84
CSMD1-218ENST00000635120 ST13P4Q8IZP2 240 aaPredicted RBP9.82□□□□□ -0.84
CSMD1-218ENST00000635120 ZNF710Q8N1W2 664 aa9.82□□□□□ -0.84
CSMD1-218ENST00000635120 ACCSQ96QU6 501 aa9.82□□□□□ -0.84
CSMD1-218ENST00000635120 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.82□□□□□ -0.84
CSMD1-218ENST00000635120 CUL1Q13616 776 aa9.82□□□□□ -0.84
CSMD1-218ENST00000635120 C16orf87Q6PH81 154 aa9.82□□□□□ -0.84
CSMD1-218ENST00000635120 FBXL13Q8NEE6 735 aa9.82□□□□□ -0.84
CSMD1-218ENST00000635120 SERPINI1Q99574 410 aa9.82□□□□□ -0.84
CSMD1-218ENST00000635120 EIF2AQ9BY44 585 aaKnown RBP9.82□□□□□ -0.84
CSMD1-218ENST00000635120 FTOQ9C0B1 505 aaKnown RBP eCLIP9.82□□□□□ -0.84
CSMD1-218ENST00000635120 MEIS1O00470 390 aa9.82□□□□□ -0.84
CSMD1-218ENST00000635120 CACNB1Q02641 598 aaPredicted RBP9.82□□□□□ -0.84
CSMD1-218ENST00000635120 BBS9Q3SYG4 887 aa9.82□□□□□ -0.84
CSMD1-218ENST00000635120 HABP4Q5JVS0 413 aaKnown RBP9.82□□□□□ -0.84
CSMD1-218ENST00000635120 SCARA5Q6ZMJ2 495 aa9.82□□□□□ -0.84
CSMD1-218ENST00000635120 NEK9Q8TD19 979 aa9.82□□□□□ -0.84
CSMD1-218ENST00000635120 NUDCD1Q96RS6 583 aa9.82□□□□□ -0.84
CSMD1-218ENST00000635120 NFU1Q9UMS0 254 aa9.82□□□□□ -0.84
CSMD1-218ENST00000635120 ZMYM3Q14202 1370 aa9.82□□□□□ -0.84
CSMD1-218ENST00000635120 PLCG1P19174 1290 aa9.82□□□□□ -0.84
CSMD1-218ENST00000635120 ZBTB38Q8NAP3 1195 aaPredicted RBP9.82□□□□□ -0.84
CSMD1-218ENST00000635120 DYDC2Q96IM9 177 aa9.82□□□□□ -0.84
CSMD1-218ENST00000635120 ABCF3Q9NUQ8 709 aa9.82□□□□□ -0.84
CSMD1-218ENST00000635120 TADA3O75528 432 aa9.82□□□□□ -0.84
CSMD1-218ENST00000635120 GUCY2CP25092 1073 aa9.82□□□□□ -0.84
CSMD1-218ENST00000635120 TRAPPC10P48553 1259 aa9.82□□□□□ -0.84
CSMD1-218ENST00000635120 LRRC24Q50LG9 513 aa9.82□□□□□ -0.84
CSMD1-218ENST00000635120 ATG16L1Q676U5 607 aa9.82□□□□□ -0.84
CSMD1-218ENST00000635120 EXOC4Q96A65 974 aa9.82□□□□□ -0.84
CSMD1-218ENST00000635120 MED7O43513 233 aa9.82□□□□□ -0.84
CSMD1-218ENST00000635120 TTLL1O95922 423 aa9.82□□□□□ -0.84
CSMD1-218ENST00000635120 PHKA1P46020 1223 aa9.82□□□□□ -0.84
CSMD1-218ENST00000635120 THOC5Q13769 683 aaKnown RBP9.82□□□□□ -0.84
CSMD1-218ENST00000635120 SLC7A3Q8WY07 619 aa9.82□□□□□ -0.84
CSMD1-218ENST00000635120 ADCK5Q3MIX3 580 aa9.82□□□□□ -0.84
CSMD1-218ENST00000635120 GAS2L3Q86XJ1 694 aa9.82□□□□□ -0.84
CSMD1-218ENST00000635120 PLAAQ9Y263 795 aa9.82□□□□□ -0.84
CSMD1-218ENST00000635120 CCDC195A0A1B0GUA6 201 aa9.82□□□□□ -0.84
CSMD1-218ENST00000635120 PTPRTO14522 1441 aa9.82□□□□□ -0.84
CSMD1-218ENST00000635120 DEUP1Q05D60 604 aa9.82□□□□□ -0.84
CSMD1-218ENST00000635120 ARMC9Q7Z3E5 817 aa9.82□□□□□ -0.84
CSMD1-218ENST00000635120 PANX2Q96RD6 677 aa9.82□□□□□ -0.84
CSMD1-218ENST00000635120 UPF3AQ9H1J1 476 aaKnown RBP9.82□□□□□ -0.84
CSMD1-218ENST00000635120 INO80B-WBP1J3KQ70 363 aa9.82□□□□□ -0.84
CSMD1-218ENST00000635120 PCP11498 1178 aaKnown RBP9.82□□□□□ -0.84
CSMD1-218ENST00000635120 ZNF658Q5TYW1 1059 aaPredicted RBP9.82□□□□□ -0.84
CSMD1-218ENST00000635120 BBS5Q8N3I7 341 aa9.82□□□□□ -0.84
CSMD1-218ENST00000635120 HIPK4Q8NE63 616 aa9.82□□□□□ -0.84
CSMD1-218ENST00000635120 INO80BQ9C086 356 aaPredicted RBP9.82□□□□□ -0.84
CSMD1-218ENST00000635120 DNAJC17Q9NVM6 304 aaKnown RBP9.82□□□□□ -0.84
CSMD1-218ENST00000635120 TRIM67Q6ZTA4 783 aa9.81□□□□□ -0.84
CSMD1-218ENST00000635120 ZNF589Q86UQ0 364 aaPredicted RBP9.81□□□□□ -0.84
CSMD1-218ENST00000635120 NCLNQ969V3 563 aa9.81□□□□□ -0.84
CSMD1-218ENST00000635120 AK8Q96MA6 479 aa9.81□□□□□ -0.84
CSMD1-218ENST00000635120 NBPF3Q9H094 633 aa9.81□□□□□ -0.84
CSMD1-218ENST00000635120 INPP5FQ9Y2H2 1132 aa9.81□□□□□ -0.84
CSMD1-218ENST00000635120 ARID1BQ8NFD5 2236 aaPredicted RBP9.81□□□□□ -0.84
CSMD1-218ENST00000635120 CEP19Q96LK0 163 aa9.81□□□□□ -0.84
CSMD1-218ENST00000635120 PARD6BQ9BYG5 372 aa9.81□□□□□ -0.84
CSMD1-218ENST00000635120 TRIM15Q9C019 465 aa9.81□□□□□ -0.84
CSMD1-218ENST00000635120 NRBP2Q9NSY0 501 aa9.81□□□□□ -0.84
CSMD1-218ENST00000635120 TEKT2Q9UIF3 430 aa9.81□□□□□ -0.84
CSMD1-218ENST00000635120 ATP8B3O60423 1300 aa9.81□□□□□ -0.84
CSMD1-218ENST00000635120 A0A0G2JND7 137 aa9.81□□□□□ -0.84
CSMD1-218ENST00000635120 GNL1P36915 607 aaPredicted RBP9.81□□□□□ -0.84
CSMD1-218ENST00000635120 ARL4AP40617 200 aa9.81□□□□□ -0.84
CSMD1-218ENST00000635120 CEP70Q8NHQ1 597 aa9.81□□□□□ -0.84
CSMD1-218ENST00000635120 AMNQ9BXJ7 453 aa9.81□□□□□ -0.84
CSMD1-218ENST00000635120 MAPK13O15264 365 aa9.81□□□□□ -0.84
CSMD1-218ENST00000635120 CSPG5O95196 566 aa9.81□□□□□ -0.84
CSMD1-218ENST00000635120 FOSP01100 380 aaPredicted RBP9.81□□□□□ -0.84
CSMD1-218ENST00000635120 PNMA6AP0CW24 399 aaPredicted RBP9.81□□□□□ -0.84
CSMD1-218ENST00000635120 TTLL7Q6ZT98 887 aa9.81□□□□□ -0.84
CSMD1-218ENST00000635120 CRLF3Q8IUI8 442 aa9.81□□□□□ -0.84
CSMD1-218ENST00000635120 PCIF1Q9H4Z3 704 aa9.81□□□□□ -0.84
CSMD1-218ENST00000635120 CCDC151A5D8V7 595 aa9.81□□□□□ -0.84
CSMD1-218ENST00000635120 ERVV-2B6SEH9 535 aa9.81□□□□□ -0.84
CSMD1-218ENST00000635120 NPR1P16066 1061 aa9.81□□□□□ -0.84
CSMD1-218ENST00000635120 MYO1EQ12965 1108 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms