RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 CA3P07451 260 aa19.62■□□□□ 0.73
HMGN3-203ENST00000620514 ARP10275 920 aa19.62■□□□□ 0.73
HMGN3-203ENST00000620514 WDR5P61964 334 aaKnown RBP19.62■□□□□ 0.73
HMGN3-203ENST00000620514 ADGRE1Q14246 886 aa19.62■□□□□ 0.73
HMGN3-203ENST00000620514 JAKMIP3Q5VZ66 844 aa19.62■□□□□ 0.73
HMGN3-203ENST00000620514 HERC6Q8IVU3 1022 aa19.62■□□□□ 0.73
HMGN3-203ENST00000620514 USP38Q8NB14 1042 aa19.62■□□□□ 0.73
HMGN3-203ENST00000620514 LMBR1Q8WVP7 490 aa19.62■□□□□ 0.73
HMGN3-203ENST00000620514 GAS2L1Q99501 681 aaPredicted RBP19.62■□□□□ 0.73
HMGN3-203ENST00000620514 KCNH7Q9NS40 1196 aa19.62■□□□□ 0.73
HMGN3-203ENST00000620514 PPP4R2Q9NY27 417 aa19.62■□□□□ 0.73
HMGN3-203ENST00000620514 MYO9BQ13459 2157 aa19.61■□□□□ 0.73
HMGN3-203ENST00000620514 PTPRSQ13332 1948 aa19.61■□□□□ 0.73
HMGN3-203ENST00000620514 RSPH10B2B2RC85 870 aa19.61■□□□□ 0.73
HMGN3-203ENST00000620514 MAFGO15525 162 aa19.61■□□□□ 0.73
HMGN3-203ENST00000620514 PRPF3O43395 683 aaKnown RBP19.61■□□□□ 0.73
HMGN3-203ENST00000620514 ARHGEF15O94989 841 aa19.61■□□□□ 0.73
HMGN3-203ENST00000620514 RSPH10BP0C881 870 aa19.61■□□□□ 0.73
HMGN3-203ENST00000620514 MARK3P27448 753 aa19.61■□□□□ 0.73
HMGN3-203ENST00000620514 PDIA3P30101 505 aaKnown RBP19.61■□□□□ 0.73
HMGN3-203ENST00000620514 SREBF1P36956 1147 aa19.61■□□□□ 0.73
HMGN3-203ENST00000620514 KCNJ6P48051 423 aa19.61■□□□□ 0.73
HMGN3-203ENST00000620514 CCT2P78371 535 aaKnown RBP19.61■□□□□ 0.73
HMGN3-203ENST00000620514 ADAM17P78536 824 aa19.61■□□□□ 0.73
HMGN3-203ENST00000620514 DEFB103AP81534 67 aa19.61■□□□□ 0.73
HMGN3-203ENST00000620514 ARHGAP4P98171 946 aa19.61■□□□□ 0.73
HMGN3-203ENST00000620514 AP3B2Q13367 1082 aa19.61■□□□□ 0.73
HMGN3-203ENST00000620514 TOB2Q14106 344 aaPredicted RBP19.61■□□□□ 0.73
HMGN3-203ENST00000620514 NTRK3Q16288 839 aa19.61■□□□□ 0.73
HMGN3-203ENST00000620514 RUFY3Q7L099 469 aa19.61■□□□□ 0.73
HMGN3-203ENST00000620514 TEX2Q8IWB9 1127 aa19.61■□□□□ 0.73
HMGN3-203ENST00000620514 OSBPL7Q9BZF2 842 aa19.61■□□□□ 0.73
HMGN3-203ENST00000620514 NCOA5Q9HCD5 579 aaKnown RBP19.61■□□□□ 0.73
HMGN3-203ENST00000620514 ZSWIM6Q9HCJ5 1215 aa19.61■□□□□ 0.73
HMGN3-203ENST00000620514 DLL1O00548 723 aa19.6■□□□□ 0.73
HMGN3-203ENST00000620514 EPB41L2O43491 1005 aaKnown RBP19.6■□□□□ 0.73
HMGN3-203ENST00000620514 CTSHP09668 335 aa19.6■□□□□ 0.73
HMGN3-203ENST00000620514 GNAT1P11488 350 aa19.6■□□□□ 0.73
HMGN3-203ENST00000620514 EVCP57679 992 aa19.6■□□□□ 0.73
HMGN3-203ENST00000620514 ITGB3BPQ13352 177 aaPredicted RBP19.6■□□□□ 0.73
HMGN3-203ENST00000620514 CEP55Q53EZ4 464 aa19.6■□□□□ 0.73
HMGN3-203ENST00000620514 PCYT2Q99447 389 aa19.6■□□□□ 0.73
HMGN3-203ENST00000620514 LARP6Q9BRS8 491 aaKnown RBP19.6■□□□□ 0.73
HMGN3-203ENST00000620514 GLT8D2Q9H1C3 349 aa19.6■□□□□ 0.73
HMGN3-203ENST00000620514 JPH1Q9HDC5 661 aaPredicted RBP19.6■□□□□ 0.73
HMGN3-203ENST00000620514 EYSQ5T1H1 3165 aa19.59■□□□□ 0.73
HMGN3-203ENST00000620514 MEIS1O00470 390 aa19.59■□□□□ 0.73
HMGN3-203ENST00000620514 LGR5O75473 907 aa19.59■□□□□ 0.73
HMGN3-203ENST00000620514 DBF4BQ8NFT6 615 aa19.59■□□□□ 0.73
HMGN3-203ENST00000620514 PPM1EQ8WY54 764 aa19.59■□□□□ 0.73
HMGN3-203ENST00000620514 GLG1Q92896 1179 aa19.59■□□□□ 0.73
HMGN3-203ENST00000620514 SLC26A6Q9BXS9 759 aa19.59■□□□□ 0.73
HMGN3-203ENST00000620514 UPF3BQ9BZI7 483 aaKnown RBP19.59■□□□□ 0.73
HMGN3-203ENST00000620514 ZMYND12Q9H0C1 365 aa19.59■□□□□ 0.73
HMGN3-203ENST00000620514 CERS4Q9HA82 394 aa19.59■□□□□ 0.73
HMGN3-203ENST00000620514 AGO4Q9HCK5 861 aaKnown RBP19.59■□□□□ 0.73
HMGN3-203ENST00000620514 SLC9A2Q9UBY0 812 aa19.59■□□□□ 0.73
HMGN3-203ENST00000620514 NRCAMQ92823 1304 aa19.58■□□□□ 0.73
HMGN3-203ENST00000620514 ABHD14A-ACY1A0A1B0GW23 586 aa19.58■□□□□ 0.72
HMGN3-203ENST00000620514 ESYT2A0FGR8 921 aa19.58■□□□□ 0.72
HMGN3-203ENST00000620514 IFNAR1P17181 557 aa19.58■□□□□ 0.72
HMGN3-203ENST00000620514 IGFBP4P22692 258 aa19.58■□□□□ 0.72
HMGN3-203ENST00000620514 ZNF76P36508 570 aa19.58■□□□□ 0.72
HMGN3-203ENST00000620514 RUFY4Q6ZNE9 571 aa19.58■□□□□ 0.72
HMGN3-203ENST00000620514 SDF4Q9BRK5 362 aa19.58■□□□□ 0.72
HMGN3-203ENST00000620514 SMARCAD1Q9H4L7 1026 aa19.58■□□□□ 0.72
HMGN3-203ENST00000620514 ERAP1Q9NZ08 941 aa19.58■□□□□ 0.72
HMGN3-203ENST00000620514 CYP46A1Q9Y6A2 500 aa19.58■□□□□ 0.72
HMGN3-203ENST00000620514 NFASCO94856 1347 aa19.57■□□□□ 0.72
HMGN3-203ENST00000620514 EMSYQ7Z589 1322 aa19.57■□□□□ 0.72
HMGN3-203ENST00000620514 KIF28PB7ZC32 967 aa19.57■□□□□ 0.72
HMGN3-203ENST00000620514 FAM86B1E9PN63 330 aa19.57■□□□□ 0.72
HMGN3-203ENST00000620514 RFXAPO00287 272 aa19.57■□□□□ 0.72
HMGN3-203ENST00000620514 TLL1O43897 1013 aa19.57■□□□□ 0.72
HMGN3-203ENST00000620514 FAM86B2P0C5J1 330 aa19.57■□□□□ 0.72
HMGN3-203ENST00000620514 ACTR2P61160 394 aa19.57■□□□□ 0.72
HMGN3-203ENST00000620514 AKAP17AQ02040 695 aaKnown RBP19.57■□□□□ 0.72
HMGN3-203ENST00000620514 TAP1Q03518 808 aa19.57■□□□□ 0.72
HMGN3-203ENST00000620514 PPFIA1Q13136 1202 aa19.57■□□□□ 0.72
HMGN3-203ENST00000620514 IKBKEQ14164 716 aa19.57■□□□□ 0.72
HMGN3-203ENST00000620514 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.57■□□□□ 0.72
HMGN3-203ENST00000620514 SPRED2Q7Z698 418 aa19.57■□□□□ 0.72
HMGN3-203ENST00000620514 RASGRP4Q8TDF6 673 aa19.57■□□□□ 0.72
HMGN3-203ENST00000620514 CRYGNQ8WXF5 182 aa19.57■□□□□ 0.72
HMGN3-203ENST00000620514 ZBTB10Q96DT7 871 aa19.57■□□□□ 0.72
HMGN3-203ENST00000620514 UIMC1Q96RL1 719 aa19.57■□□□□ 0.72
HMGN3-203ENST00000620514 RNF26Q9BY78 433 aaPredicted RBP19.57■□□□□ 0.72
HMGN3-203ENST00000620514 C6orf50Q9HD87 102 aa19.57■□□□□ 0.72
HMGN3-203ENST00000620514 PRDM6Q9NQX0 595 aa19.57■□□□□ 0.72
HMGN3-203ENST00000620514 LCHNA4D1U4 455 aa19.56■□□□□ 0.72
HMGN3-203ENST00000620514 EPOPA6NHQ4 379 aa19.56■□□□□ 0.72
HMGN3-203ENST00000620514 DDX39AO00148 427 aaKnown RBP19.56■□□□□ 0.72
HMGN3-203ENST00000620514 CAND2O75155 1236 aa19.56■□□□□ 0.72
HMGN3-203ENST00000620514 GRIK4Q16099 956 aa19.56■□□□□ 0.72
HMGN3-203ENST00000620514 PLEKHG4Q58EX7 1191 aa19.56■□□□□ 0.72
HMGN3-203ENST00000620514 FAM117BQ6P1L5 589 aa19.56■□□□□ 0.72
HMGN3-203ENST00000620514 PLA2G4DQ86XP0 818 aa19.56■□□□□ 0.72
HMGN3-203ENST00000620514 CCDC12Q8WUD4 166 aaPredicted RBP19.56■□□□□ 0.72
HMGN3-203ENST00000620514 TM6SF1Q9BZW5 370 aa19.56■□□□□ 0.72
HMGN3-203ENST00000620514 VPS54Q9P1Q0 977 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms