RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 PPP1R18Q6NYC8 613 aa13□□□□□ -0.33
C11orf54-215ENST00000617482 C8orf74Q6P047 294 aa13□□□□□ -0.33
C11orf54-215ENST00000617482 TRIM59Q8IWR1 403 aa13□□□□□ -0.33
C11orf54-215ENST00000617482 RNF10Q8N5U6 811 aaKnown RBP13□□□□□ -0.33
C11orf54-215ENST00000617482 TSEN2Q8NCE0 465 aaKnown RBP13□□□□□ -0.33
C11orf54-215ENST00000617482 PACSIN1Q9BY11 444 aa13□□□□□ -0.33
C11orf54-215ENST00000617482 NT5C3AQ9H0P0 336 aa13□□□□□ -0.33
C11orf54-215ENST00000617482 ATP6V0A2Q9Y487 856 aa13□□□□□ -0.33
C11orf54-215ENST00000617482 CDK5RAP2Q96SN8 1893 aa13□□□□□ -0.33
C11orf54-215ENST00000617482 TAF1LQ8IZX4 1826 aa12.99□□□□□ -0.33
C11orf54-215ENST00000617482 ESYT3A0FGR9 886 aa12.99□□□□□ -0.33
C11orf54-215ENST00000617482 RBAK-RBAKDNI3L0D1 243 aa12.99□□□□□ -0.33
C11orf54-215ENST00000617482 CYP11B2P19099 503 aa12.99□□□□□ -0.33
C11orf54-215ENST00000617482 DOK7Q18PE1 504 aa12.99□□□□□ -0.33
C11orf54-215ENST00000617482 KIAA0753Q2KHM9 967 aa12.99□□□□□ -0.33
C11orf54-215ENST00000617482 SHROOM1Q2M3G4 852 aaPredicted RBP12.99□□□□□ -0.33
C11orf54-215ENST00000617482 GPATCH4Q5T3I0 446 aaKnown RBP12.99□□□□□ -0.33
C11orf54-215ENST00000617482 CEP63Q96MT8 703 aa12.99□□□□□ -0.33
C11orf54-215ENST00000617482 KCTD10Q9H3F6 313 aa12.99□□□□□ -0.33
C11orf54-215ENST00000617482 PCDHA1Q9Y5I3 950 aa12.99□□□□□ -0.33
C11orf54-215ENST00000617482 POTEFA5A3E0 1075 aa12.99□□□□□ -0.33
C11orf54-215ENST00000617482 ZSCAN5CA6NGD5 496 aaPredicted RBP12.99□□□□□ -0.33
C11orf54-215ENST00000617482 FAM196BA6NMK8 535 aa12.99□□□□□ -0.33
C11orf54-215ENST00000617482 MEIS1O00470 390 aa12.99□□□□□ -0.33
C11orf54-215ENST00000617482 MED24O75448 989 aa12.99□□□□□ -0.33
C11orf54-215ENST00000617482 GLI1P08151 1106 aa12.99□□□□□ -0.33
C11orf54-215ENST00000617482 POTEIP0CG38 1075 aa12.99□□□□□ -0.33
C11orf54-215ENST00000617482 ACTN1P12814 892 aa12.99□□□□□ -0.33
C11orf54-215ENST00000617482 GCFC2P16383 781 aaKnown RBP12.99□□□□□ -0.33
C11orf54-215ENST00000617482 SNAP25P60880 206 aa12.99□□□□□ -0.33
C11orf54-215ENST00000617482 KLHL30Q0D2K2 578 aa12.99□□□□□ -0.33
C11orf54-215ENST00000617482 NAB2Q15742 525 aa12.99□□□□□ -0.33
C11orf54-215ENST00000617482 DNAJC21Q5F1R6 531 aaKnown RBP12.99□□□□□ -0.33
C11orf54-215ENST00000617482 ARSHQ5FYA8 562 aa12.99□□□□□ -0.33
C11orf54-215ENST00000617482 POTEGQ6S5H5 508 aa12.99□□□□□ -0.33
C11orf54-215ENST00000617482 POTEEQ6S8J3 1075 aa12.99□□□□□ -0.33
C11orf54-215ENST00000617482 IFNLR1Q8IU57 520 aaPredicted RBP12.99□□□□□ -0.33
C11orf54-215ENST00000617482 ZFPM1Q8IX07 1006 aa12.99□□□□□ -0.33
C11orf54-215ENST00000617482 IFT81Q8WYA0 676 aa12.99□□□□□ -0.33
C11orf54-215ENST00000617482 NUCKS1Q9H1E3 243 aaKnown RBP12.99□□□□□ -0.33
C11orf54-215ENST00000617482 RASSF4Q9H2L5 321 aa12.99□□□□□ -0.33
C11orf54-215ENST00000617482 RABEP2Q9H5N1 569 aa12.99□□□□□ -0.33
C11orf54-215ENST00000617482 POLD4Q9HCU8 107 aa12.99□□□□□ -0.33
C11orf54-215ENST00000617482 KDM3AQ9Y4C1 1321 aa12.98□□□□□ -0.33
C11orf54-215ENST00000617482 GNA14O95837 355 aa12.98□□□□□ -0.33
C11orf54-215ENST00000617482 CASP5P51878 434 aa12.98□□□□□ -0.33
C11orf54-215ENST00000617482 EPHB4P54760 987 aa12.98□□□□□ -0.33
C11orf54-215ENST00000617482 KCNH2Q12809 1159 aa12.98□□□□□ -0.33
C11orf54-215ENST00000617482 NFIAQ12857 509 aa12.98□□□□□ -0.33
C11orf54-215ENST00000617482 SLC18A3Q16572 532 aa12.98□□□□□ -0.33
C11orf54-215ENST00000617482 QRICH1Q2TAL8 776 aa12.98□□□□□ -0.33
C11orf54-215ENST00000617482 HYIQ5T013 277 aa12.98□□□□□ -0.33
C11orf54-215ENST00000617482 TTC19Q6DKK2 380 aaPredicted RBP12.98□□□□□ -0.33
C11orf54-215ENST00000617482 FOXR2Q6PJQ5 311 aa12.98□□□□□ -0.33
C11orf54-215ENST00000617482 DNAAF5Q86Y56 855 aa12.98□□□□□ -0.33
C11orf54-215ENST00000617482 SYN2Q92777 582 aaPredicted RBP12.98□□□□□ -0.33
C11orf54-215ENST00000617482 TSPYL1Q9H0U9 437 aa12.98□□□□□ -0.33
C11orf54-215ENST00000617482 SWAP70Q9UH65 585 aa12.98□□□□□ -0.33
C11orf54-215ENST00000617482 NR2F2P24468 414 aa12.98□□□□□ -0.33
C11orf54-215ENST00000617482 CARSP49589 748 aaKnown RBP12.98□□□□□ -0.33
C11orf54-215ENST00000617482 PSMC6P62333 389 aa12.98□□□□□ -0.33
C11orf54-215ENST00000617482 CDC42EP5Q6NZY7 148 aa12.98□□□□□ -0.33
C11orf54-215ENST00000617482 EHD4Q9H223 541 aa12.98□□□□□ -0.33
C11orf54-215ENST00000617482 EPB41L5Q9HCM4 733 aa12.98□□□□□ -0.33
C11orf54-215ENST00000617482 PPFIA4O75335 1185 aa12.97□□□□□ -0.33
C11orf54-215ENST00000617482 CACNB3P54284 484 aa12.97□□□□□ -0.33
C11orf54-215ENST00000617482 GUCY2DQ02846 1103 aa12.97□□□□□ -0.33
C11orf54-215ENST00000617482 TCP10Q12799 353 aa12.97□□□□□ -0.33
C11orf54-215ENST00000617482 PABPC4Q13310 644 aaKnown RBP eCLIP12.97□□□□□ -0.33
C11orf54-215ENST00000617482 PRR16Q569H4 304 aa12.97□□□□□ -0.33
C11orf54-215ENST00000617482 EMBQ6PCB8 327 aa12.97□□□□□ -0.33
C11orf54-215ENST00000617482 ARL8AQ96BM9 186 aa12.97□□□□□ -0.33
C11orf54-215ENST00000617482 KCNMB3Q9NPA1 279 aa12.97□□□□□ -0.33
C11orf54-215ENST00000617482 LUC7LQ9NQ29 371 aaKnown RBP12.97□□□□□ -0.33
C11orf54-215ENST00000617482 TSKSQ9UJT2 592 aa12.97□□□□□ -0.33
C11orf54-215ENST00000617482 NFU1Q9UMS0 254 aa12.97□□□□□ -0.33
C11orf54-215ENST00000617482 NHSQ6T4R5 1651 aa12.97□□□□□ -0.33
C11orf54-215ENST00000617482 CETN3O15182 167 aa12.97□□□□□ -0.33
C11orf54-215ENST00000617482 FAM153BP0C7A2 387 aa12.97□□□□□ -0.33
C11orf54-215ENST00000617482 SLC9A1P19634 815 aa12.97□□□□□ -0.33
C11orf54-215ENST00000617482 HOXA7P31268 230 aaPredicted RBP12.97□□□□□ -0.33
C11orf54-215ENST00000617482 IRAK1P51617 712 aa12.97□□□□□ -0.33
C11orf54-215ENST00000617482 SLC12A3P55017 1021 aa12.97□□□□□ -0.33
C11orf54-215ENST00000617482 ASIC2Q16515 512 aa12.97□□□□□ -0.33
C11orf54-215ENST00000617482 PTPROQ16827 1216 aa12.97□□□□□ -0.33
C11orf54-215ENST00000617482 FAM153CQ494X1 144 aa12.97□□□□□ -0.33
C11orf54-215ENST00000617482 ARHGAP27Q6ZUM4 889 aa12.97□□□□□ -0.33
C11orf54-215ENST00000617482 CATSPER3Q86XQ3 398 aa12.97□□□□□ -0.33
C11orf54-215ENST00000617482 RUFY1Q96T51 708 aa12.97□□□□□ -0.33
C11orf54-215ENST00000617482 KRT12Q99456 494 aa12.97□□□□□ -0.33
C11orf54-215ENST00000617482 ANO3Q9BYT9 981 aa12.97□□□□□ -0.33
C11orf54-215ENST00000617482 ZC3H12CQ9C0D7 883 aaKnown RBP12.97□□□□□ -0.33
C11orf54-215ENST00000617482 FAM153AQ9UHL3 310 aa12.97□□□□□ -0.33
C11orf54-215ENST00000617482 KCNG1Q9UIX4 513 aa12.97□□□□□ -0.33
C11orf54-215ENST00000617482 HDAC9Q9UKV0 1011 aa12.97□□□□□ -0.33
C11orf54-215ENST00000617482 PPEF1O14829 653 aaPredicted RBP12.96□□□□□ -0.33
C11orf54-215ENST00000617482 HSF2BPO75031 334 aa12.96□□□□□ -0.33
C11orf54-215ENST00000617482 HEXIM1O94992 359 aaKnown RBP12.96□□□□□ -0.33
C11orf54-215ENST00000617482 HLA-DOAP06340 250 aa12.96□□□□□ -0.33
C11orf54-215ENST00000617482 HOXA10P31260 410 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms