RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 BMP3P12645 472 aa18.79■□□□□ 0.6
HMGXB3-206ENST00000613459 NR1D1P20393 614 aa18.79■□□□□ 0.6
HMGXB3-206ENST00000613459 RCAN1P53805 252 aa18.79■□□□□ 0.6
HMGXB3-206ENST00000613459 MYO1EQ12965 1108 aa18.79■□□□□ 0.6
HMGXB3-206ENST00000613459 IQCB1Q15051 598 aa18.79■□□□□ 0.6
HMGXB3-206ENST00000613459 FAM133BQ5BKY9 247 aaKnown RBP18.79■□□□□ 0.6
HMGXB3-206ENST00000613459 CC2D2BQ6DHV5 1058 aa18.79■□□□□ 0.6
HMGXB3-206ENST00000613459 RASGRF2O14827 1237 aa18.78■□□□□ 0.6
HMGXB3-206ENST00000613459 APBA3O96018 575 aa18.78■□□□□ 0.6
HMGXB3-206ENST00000613459 ACTN1P12814 892 aa18.78■□□□□ 0.6
HMGXB3-206ENST00000613459 RFX1P22670 979 aa18.78■□□□□ 0.6
HMGXB3-206ENST00000613459 MXI1P50539 228 aa18.78■□□□□ 0.6
HMGXB3-206ENST00000613459 THOC5Q13769 683 aaKnown RBP18.78■□□□□ 0.6
HMGXB3-206ENST00000613459 KIAA0825Q8IV33 1275 aa18.78■□□□□ 0.6
HMGXB3-206ENST00000613459 SPTLC3Q9NUV7 552 aa18.78■□□□□ 0.6
HMGXB3-206ENST00000613459 WDR19Q8NEZ3 1342 aa18.78■□□□□ 0.6
HMGXB3-206ENST00000613459 NR1H3Q13133 447 aa18.78■□□□□ 0.6
HMGXB3-206ENST00000613459 SULF1Q8IWU6 871 aa18.78■□□□□ 0.6
HMGXB3-206ENST00000613459 TRIM15Q9C019 465 aa18.78■□□□□ 0.6
HMGXB3-206ENST00000613459 MTA3Q9BTC8 594 aa18.78■□□□□ 0.6
HMGXB3-206ENST00000613459 DONSONQ9NYP3 566 aa18.78■□□□□ 0.6
HMGXB3-206ENST00000613459 YEATS2Q9ULM3 1422 aa18.78■□□□□ 0.6
HMGXB3-206ENST00000613459 LOC102724428A0A0B4J2F2 783 aa18.78■□□□□ 0.6
HMGXB3-206ENST00000613459 MIF4GDA9UHW6 222 aaKnown RBP18.78■□□□□ 0.6
HMGXB3-206ENST00000613459 ADORA1P30542 326 aa18.78■□□□□ 0.6
HMGXB3-206ENST00000613459 SIK1P57059 783 aa18.78■□□□□ 0.6
HMGXB3-206ENST00000613459 LRRC23Q53EV4 343 aaPredicted RBP18.78■□□□□ 0.6
HMGXB3-206ENST00000613459 SYDE2Q5VT97 1194 aa18.78■□□□□ 0.6
HMGXB3-206ENST00000613459 CNPY4Q8N129 248 aa18.78■□□□□ 0.6
HMGXB3-206ENST00000613459 EIF4A3P38919 411 aaKnown RBP18.77■□□□□ 0.6
HMGXB3-206ENST00000613459 SCNN1DP51172 638 aa18.77■□□□□ 0.6
HMGXB3-206ENST00000613459 AP3B2Q13367 1082 aa18.77■□□□□ 0.6
HMGXB3-206ENST00000613459 STK36Q9NRP7 1315 aa18.77■□□□□ 0.6
HMGXB3-206ENST00000613459 PSAPP07602 524 aa18.77■□□□□ 0.6
HMGXB3-206ENST00000613459 DR1Q01658 176 aa18.77■□□□□ 0.6
HMGXB3-206ENST00000613459 CENPUQ71F23 418 aa18.77■□□□□ 0.6
HMGXB3-206ENST00000613459 ST13P4Q8IZP2 240 aaPredicted RBP18.77■□□□□ 0.6
HMGXB3-206ENST00000613459 DHX38Q92620 1227 aaKnown RBP18.77■□□□□ 0.6
HMGXB3-206ENST00000613459 SERPINB13Q9UIV8 391 aa18.77■□□□□ 0.6
HMGXB3-206ENST00000613459 RFX7Q2KHR2 1363 aa18.77■□□□□ 0.6
HMGXB3-206ENST00000613459 ZNF579Q8NAF0 562 aaKnown RBP18.77■□□□□ 0.6
HMGXB3-206ENST00000613459 FMO2Q99518 471 aa18.77■□□□□ 0.6
HMGXB3-206ENST00000613459 CAV1Q03135 178 aa18.77■□□□□ 0.59
HMGXB3-206ENST00000613459 DARS2Q6PI48 645 aaKnown RBP18.77■□□□□ 0.59
HMGXB3-206ENST00000613459 RNF169Q8NCN4 708 aa18.77■□□□□ 0.59
HMGXB3-206ENST00000613459 PAGE5Q96GU1 130 aa18.77■□□□□ 0.59
HMGXB3-206ENST00000613459 NDST4Q9H3R1 872 aa18.77■□□□□ 0.59
HMGXB3-206ENST00000613459 GNGT2O14610 69 aa18.76■□□□□ 0.59
HMGXB3-206ENST00000613459 LDHAP00338 332 aaKnown RBP18.76■□□□□ 0.59
HMGXB3-206ENST00000613459 CASP8Q14790 479 aa18.76■□□□□ 0.59
HMGXB3-206ENST00000613459 CPSF1Q10570 1443 aaKnown RBP18.76■□□□□ 0.59
HMGXB3-206ENST00000613459 PPARGP37231 505 aaPredicted RBP18.76■□□□□ 0.59
HMGXB3-206ENST00000613459 PROM2Q8N271 834 aa18.76■□□□□ 0.59
HMGXB3-206ENST00000613459 N4BP2L2Q92802 583 aaPredicted RBP18.76■□□□□ 0.59
HMGXB3-206ENST00000613459 PPWD1Q96BP3 646 aaKnown RBP18.76■□□□□ 0.59
HMGXB3-206ENST00000613459 NRBF2Q96F24 287 aa18.76■□□□□ 0.59
HMGXB3-206ENST00000613459 NUDCD1Q96RS6 583 aa18.76■□□□□ 0.59
HMGXB3-206ENST00000613459 PLA2G4BP0C869 781 aa18.76■□□□□ 0.59
HMGXB3-206ENST00000613459 SAT1P21673 171 aa18.76■□□□□ 0.59
HMGXB3-206ENST00000613459 CRKLP46109 303 aaKnown RBP18.76■□□□□ 0.59
HMGXB3-206ENST00000613459 TCP11X2Q5H9J9 407 aa18.76■□□□□ 0.59
HMGXB3-206ENST00000613459 CCDC24Q8N4L8 307 aa18.76■□□□□ 0.59
HMGXB3-206ENST00000613459 FAM133AQ8N9E0 248 aa18.76■□□□□ 0.59
HMGXB3-206ENST00000613459 ZMYND12Q9H0C1 365 aa18.76■□□□□ 0.59
HMGXB3-206ENST00000613459 PRPSAP2O60256 369 aa18.76■□□□□ 0.59
HMGXB3-206ENST00000613459 ZNF189O75820 626 aaPredicted RBP18.76■□□□□ 0.59
HMGXB3-206ENST00000613459 MOCS3O95396 460 aa18.76■□□□□ 0.59
HMGXB3-206ENST00000613459 RWDD2BP57060 319 aa18.76■□□□□ 0.59
HMGXB3-206ENST00000613459 SUPT20HL1Q3ZLR7 823 aa18.76■□□□□ 0.59
HMGXB3-206ENST00000613459 ARMCX2Q7L311 632 aa18.76■□□□□ 0.59
HMGXB3-206ENST00000613459 ATP5HO75947 161 aa18.76■□□□□ 0.59
HMGXB3-206ENST00000613459 ZKSCAN8Q15776 578 aaPredicted RBP18.76■□□□□ 0.59
HMGXB3-206ENST00000613459 FBXO38Q6PIJ6 1188 aa18.76■□□□□ 0.59
HMGXB3-206ENST00000613459 CEP170P1Q96L14 293 aa18.76■□□□□ 0.59
HMGXB3-206ENST00000613459 NBPF3Q9H094 633 aa18.76■□□□□ 0.59
HMGXB3-206ENST00000613459 PNMA6FA0A0J9YX94 578 aa18.75■□□□□ 0.59
HMGXB3-206ENST00000613459 ANO9A1A5B4 782 aa18.75■□□□□ 0.59
HMGXB3-206ENST00000613459 XPAP23025 273 aaPredicted RBP18.75■□□□□ 0.59
HMGXB3-206ENST00000613459 STAT2P52630 851 aa18.75■□□□□ 0.59
HMGXB3-206ENST00000613459 MB21D1Q8N884 522 aa18.75■□□□□ 0.59
HMGXB3-206ENST00000613459 TTC25Q96NG3 672 aa18.75■□□□□ 0.59
HMGXB3-206ENST00000613459 BPIFA3Q9BQP9 254 aa18.75■□□□□ 0.59
HMGXB3-206ENST00000613459 EXOC1LA0A1B0GW35 172 aa18.75■□□□□ 0.59
HMGXB3-206ENST00000613459 DCTN3O75935 186 aa18.75■□□□□ 0.59
HMGXB3-206ENST00000613459 ABL1P00519 1130 aa18.75■□□□□ 0.59
HMGXB3-206ENST00000613459 NFKBIAP25963 317 aa18.75■□□□□ 0.59
HMGXB3-206ENST00000613459 RSRC2Q7L4I2 434 aaKnown RBP18.75■□□□□ 0.59
HMGXB3-206ENST00000613459 DGKHQ86XP1 1220 aa18.75■□□□□ 0.59
HMGXB3-206ENST00000613459 KCTD6Q8NC69 237 aa18.75■□□□□ 0.59
HMGXB3-206ENST00000613459 CCDC138Q96M89 665 aa18.75■□□□□ 0.59
HMGXB3-206ENST00000613459 CPSF3Q9UKF6 684 aaKnown RBP18.75■□□□□ 0.59
HMGXB3-206ENST00000613459 MAPK13O15264 365 aa18.75■□□□□ 0.59
HMGXB3-206ENST00000613459 SESTD1Q86VW0 696 aa18.75■□□□□ 0.59
HMGXB3-206ENST00000613459 PDIK1LQ8N165 341 aa18.75■□□□□ 0.59
HMGXB3-206ENST00000613459 ATP6V1E2Q96A05 226 aa18.75■□□□□ 0.59
HMGXB3-206ENST00000613459 AP5M1Q9H0R1 490 aa18.75■□□□□ 0.59
HMGXB3-206ENST00000613459 UBE2TQ9NPD8 197 aaPredicted RBP18.75■□□□□ 0.59
HMGXB3-206ENST00000613459 NOP53Q9NZM5 478 aaKnown RBP18.75■□□□□ 0.59
HMGXB3-206ENST00000613459 CDK12Q9NYV4 1490 aaPredicted RBP18.75■□□□□ 0.59
HMGXB3-206ENST00000613459 GFPT2O94808 682 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms