RNA–Protein interactions for RNA: ENST00000604911.1

LSM1P2-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM1P2, Length 322 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P2-201ENST00000604911 CTNNA3Q9UI47 895 aa6.58□□□□□ -1.36
LSM1P2-201ENST00000604911 GTF3C4Q9UKN8 822 aa6.58□□□□□ -1.36
LSM1P2-201ENST00000604911 SPG7Q9UQ90 795 aa6.58□□□□□ -1.36
LSM1P2-201ENST00000604911 NOSIPQ9Y314 301 aaKnown RBP6.58□□□□□ -1.36
LSM1P2-201ENST00000604911 RRP15Q9Y3B9 282 aaKnown RBP6.58□□□□□ -1.36
LSM1P2-201ENST00000604911 GFRA2O00451 464 aa6.57□□□□□ -1.36
LSM1P2-201ENST00000604911 ERC2O15083 957 aa6.57□□□□□ -1.36
LSM1P2-201ENST00000604911 P4HA2O15460 535 aa6.57□□□□□ -1.36
LSM1P2-201ENST00000604911 CTIFO43310 598 aaKnown RBP6.57□□□□□ -1.36
LSM1P2-201ENST00000604911 PRPF40AO75400 957 aaKnown RBP6.57□□□□□ -1.36
LSM1P2-201ENST00000604911 C1QTNF9P0C862 333 aa6.57□□□□□ -1.36
LSM1P2-201ENST00000604911 ZFXP17010 805 aaPredicted RBP6.57□□□□□ -1.36
LSM1P2-201ENST00000604911 HOXC13P31276 330 aa6.57□□□□□ -1.36
LSM1P2-201ENST00000604911 MATR3P43243 847 aaKnown RBP eCLIP6.57□□□□□ -1.36
LSM1P2-201ENST00000604911 RAB27AP51159 221 aa6.57□□□□□ -1.36
LSM1P2-201ENST00000604911 MRPL12P52815 198 aaKnown RBP6.57□□□□□ -1.36
LSM1P2-201ENST00000604911 HDAC4P56524 1084 aa6.57□□□□□ -1.36
LSM1P2-201ENST00000604911 UBXN2AP68543 259 aa6.57□□□□□ -1.36
LSM1P2-201ENST00000604911 ZBED6P86452 979 aa6.57□□□□□ -1.36
LSM1P2-201ENST00000604911 G3BP1Q13283 466 aaKnown RBP eCLIP6.57□□□□□ -1.36
LSM1P2-201ENST00000604911 MPP3Q13368 585 aa6.57□□□□□ -1.36
LSM1P2-201ENST00000604911 FAM133BQ5BKY9 247 aaKnown RBP6.57□□□□□ -1.36
LSM1P2-201ENST00000604911 WIPI1Q5MNZ9 446 aaPredicted RBP6.57□□□□□ -1.36
LSM1P2-201ENST00000604911 SH2D4BQ5SQS7 431 aa6.57□□□□□ -1.36
LSM1P2-201ENST00000604911 CFAP58Q5T655 872 aa6.57□□□□□ -1.36
LSM1P2-201ENST00000604911 PRAMEF13Q5VWM6 474 aa6.57□□□□□ -1.36
LSM1P2-201ENST00000604911 ZSCAN29Q8IWY8 852 aaPredicted RBP6.57□□□□□ -1.36
LSM1P2-201ENST00000604911 RNF168Q8IYW5 571 aaPredicted RBP6.57□□□□□ -1.36
LSM1P2-201ENST00000604911 AFAP1Q8N556 730 aa6.57□□□□□ -1.36
LSM1P2-201ENST00000604911 GBP7Q8N8V2 638 aaPredicted RBP6.57□□□□□ -1.36
LSM1P2-201ENST00000604911 WDR66Q8TBY9 1149 aa6.57□□□□□ -1.36
LSM1P2-201ENST00000604911 SUN5Q8TC36 379 aa6.57□□□□□ -1.36
LSM1P2-201ENST00000604911 ACMSDQ8TDX5 336 aa6.57□□□□□ -1.36
LSM1P2-201ENST00000604911 ANKRD49Q8WVL7 239 aa6.57□□□□□ -1.36
LSM1P2-201ENST00000604911 CCDC120Q96HB5 630 aa6.57□□□□□ -1.36
LSM1P2-201ENST00000604911 COX4I2Q96KJ9 171 aa6.57□□□□□ -1.36
LSM1P2-201ENST00000604911 C8orf48Q96LL4 319 aa6.57□□□□□ -1.36
LSM1P2-201ENST00000604911 UROC1Q96N76 676 aa6.57□□□□□ -1.36
LSM1P2-201ENST00000604911 RUFY1Q96T51 708 aa6.57□□□□□ -1.36
LSM1P2-201ENST00000604911 THUMPD2Q9BTF0 503 aaKnown RBP6.57□□□□□ -1.36
LSM1P2-201ENST00000604911 BCL2L13Q9BXK5 485 aa6.57□□□□□ -1.36
LSM1P2-201ENST00000604911 TSGA10Q9BZW7 698 aa6.57□□□□□ -1.36
LSM1P2-201ENST00000604911 PRKRIP1Q9H875 184 aaPredicted RBP6.57□□□□□ -1.36
LSM1P2-201ENST00000604911 AS3MTQ9HBK9 375 aa6.57□□□□□ -1.36
LSM1P2-201ENST00000604911 EPB41L4AQ9HCS5 686 aaPredicted RBP6.57□□□□□ -1.36
LSM1P2-201ENST00000604911 PCDH12Q9NPG4 1184 aa6.57□□□□□ -1.36
LSM1P2-201ENST00000604911 KMT5AQ9NQR1 393 aa6.57□□□□□ -1.36
LSM1P2-201ENST00000604911 UBAP1Q9NZ09 502 aa6.57□□□□□ -1.36
LSM1P2-201ENST00000604911 RGL1Q9NZL6 768 aa6.57□□□□□ -1.36
LSM1P2-201ENST00000604911 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.57□□□□□ -1.36
LSM1P2-201ENST00000604911 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.57□□□□□ -1.36
LSM1P2-201ENST00000604911 PTPRGP23470 1445 aa6.57□□□□□ -1.36
LSM1P2-201ENST00000604911 KIAA1107Q9UPP5 1409 aa6.57□□□□□ -1.36
LSM1P2-201ENST00000604911 NPC1L1Q9UHC9 1359 aa6.57□□□□□ -1.36
LSM1P2-201ENST00000604911 GOLGA8AA7E2F4 631 aa6.56□□□□□ -1.36
LSM1P2-201ENST00000604911 H0Y3Z8 333 aa6.56□□□□□ -1.36
LSM1P2-201ENST00000604911 EIF3FO00303 357 aaPredicted RBP6.56□□□□□ -1.36
LSM1P2-201ENST00000604911 FOXN3O00409 490 aaPredicted RBP6.56□□□□□ -1.36
LSM1P2-201ENST00000604911 DIAPH1O60610 1272 aaKnown RBP6.56□□□□□ -1.36
LSM1P2-201ENST00000604911 FGFR1OPO95684 399 aaKnown RBP6.56□□□□□ -1.36
LSM1P2-201ENST00000604911 RPSAP08865 295 aaKnown RBP6.56□□□□□ -1.36
LSM1P2-201ENST00000604911 U2AF2P26368 475 aaKnown RBP eCLIP6.56□□□□□ -1.36
LSM1P2-201ENST00000604911 S100A5P33763 92 aa6.56□□□□□ -1.36
LSM1P2-201ENST00000604911 KIR3DL1P43629 444 aa6.56□□□□□ -1.36
LSM1P2-201ENST00000604911 CCT8P50990 548 aa6.56□□□□□ -1.36
LSM1P2-201ENST00000604911 ETF1P62495 437 aaKnown RBP6.56□□□□□ -1.36
LSM1P2-201ENST00000604911 TUBA1BP68363 451 aa6.56□□□□□ -1.36
LSM1P2-201ENST00000604911 IKQ13123 557 aaPredicted RBP6.56□□□□□ -1.36
LSM1P2-201ENST00000604911 PABPC4Q13310 644 aaKnown RBP eCLIP6.56□□□□□ -1.36
LSM1P2-201ENST00000604911 TCEAL1Q15170 157 aa6.56□□□□□ -1.36
LSM1P2-201ENST00000604911 RASA2Q15283 850 aa6.56□□□□□ -1.36
LSM1P2-201ENST00000604911 PTPN14Q15678 1187 aa6.56□□□□□ -1.36
LSM1P2-201ENST00000604911 SYT10Q6XYQ8 523 aa6.56□□□□□ -1.36
LSM1P2-201ENST00000604911 GBP6Q6ZN66 633 aa6.56□□□□□ -1.36
LSM1P2-201ENST00000604911 TUBA1AQ71U36 451 aa6.56□□□□□ -1.36
LSM1P2-201ENST00000604911 ANKLE2Q86XL3 938 aa6.56□□□□□ -1.36
LSM1P2-201ENST00000604911 ERC1Q8IUD2 1116 aa6.56□□□□□ -1.36
LSM1P2-201ENST00000604911 NLGN1Q8N2Q7 840 aa6.56□□□□□ -1.36
LSM1P2-201ENST00000604911 TEX9Q8N6V9 391 aa6.56□□□□□ -1.36
LSM1P2-201ENST00000604911 FBXO15Q8NCQ5 510 aaPredicted RBP6.56□□□□□ -1.36
LSM1P2-201ENST00000604911 RASSF8Q8NHQ8 419 aa6.56□□□□□ -1.36
LSM1P2-201ENST00000604911 ZSCAN18Q8TBC5 510 aaPredicted RBP6.56□□□□□ -1.36
LSM1P2-201ENST00000604911 UBE2FQ969M7 185 aa6.56□□□□□ -1.36
LSM1P2-201ENST00000604911 FAM167BQ9BTA0 163 aa6.56□□□□□ -1.36
LSM1P2-201ENST00000604911 BRD8Q9H0E9 1235 aa6.56□□□□□ -1.36
LSM1P2-201ENST00000604911 VPS33BQ9H267 617 aa6.56□□□□□ -1.36
LSM1P2-201ENST00000604911 DDX56Q9NY93 547 aaKnown RBP6.56□□□□□ -1.36
LSM1P2-201ENST00000604911 ZNF69Q9UC07 566 aa6.56□□□□□ -1.36
LSM1P2-201ENST00000604911 HDAC9Q9UKV0 1011 aa6.56□□□□□ -1.36
LSM1P2-201ENST00000604911 TTLL3Q9Y4R7 772 aa6.56□□□□□ -1.36
LSM1P2-201ENST00000604911 TACC3Q9Y6A5 838 aa6.56□□□□□ -1.36
LSM1P2-201ENST00000604911 C19orf81C9J6K1 198 aa6.55□□□□□ -1.36
LSM1P2-201ENST00000604911 TBX3O15119 743 aa6.55□□□□□ -1.36
LSM1P2-201ENST00000604911 TTI1O43156 1089 aa6.55□□□□□ -1.36
LSM1P2-201ENST00000604911 ORC4O43929 436 aa6.55□□□□□ -1.36
LSM1P2-201ENST00000604911 NEMFO60524 1076 aa6.55□□□□□ -1.36
LSM1P2-201ENST00000604911 CBX7O95931 251 aa6.55□□□□□ -1.36
LSM1P2-201ENST00000604911 ESR1P03372 595 aa6.55□□□□□ -1.36
LSM1P2-201ENST00000604911 HSPA1AP0DMV8 641 aaKnown RBP6.55□□□□□ -1.36
LSM1P2-201ENST00000604911 HSPA1BP0DMV9 641 aaKnown RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms