RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 XIRP2A4UGR9 3374 aa13.62□□□□□ -0.23
LITAF-219ENST00000576334 SPTBN5Q9NRC6 3674 aaKnown RBP13.61□□□□□ -0.23
LITAF-219ENST00000576334 C17orf102A2RUQ5 167 aa13.61□□□□□ -0.23
LITAF-219ENST00000576334 REC8O95072 547 aa13.61□□□□□ -0.23
LITAF-219ENST00000576334 CA3P07451 260 aa13.61□□□□□ -0.23
LITAF-219ENST00000576334 PDIA3P30101 505 aaKnown RBP13.61□□□□□ -0.23
LITAF-219ENST00000576334 HOXC8P31273 242 aa13.61□□□□□ -0.23
LITAF-219ENST00000576334 CLK2P49760 499 aaKnown RBP13.61□□□□□ -0.23
LITAF-219ENST00000576334 WDR5P61964 334 aaKnown RBP13.61□□□□□ -0.23
LITAF-219ENST00000576334 RAB30Q15771 203 aa13.61□□□□□ -0.23
LITAF-219ENST00000576334 NTRK3Q16288 839 aa13.61□□□□□ -0.23
LITAF-219ENST00000576334 PFKFB3Q16875 520 aaPredicted RBP13.61□□□□□ -0.23
LITAF-219ENST00000576334 RASGRP4Q8TDF6 673 aa13.61□□□□□ -0.23
LITAF-219ENST00000576334 PCYT2Q99447 389 aa13.61□□□□□ -0.23
LITAF-219ENST00000576334 MXRA8Q9BRK3 442 aa13.61□□□□□ -0.23
LITAF-219ENST00000576334 SLC28A3Q9HAS3 691 aa13.61□□□□□ -0.23
LITAF-219ENST00000576334 KCNH7Q9NS40 1196 aa13.61□□□□□ -0.23
LITAF-219ENST00000576334 LCHNA4D1U4 455 aa13.6□□□□□ -0.23
LITAF-219ENST00000576334 EPOPA6NHQ4 379 aa13.6□□□□□ -0.23
LITAF-219ENST00000576334 CXCL10P02778 98 aa13.6□□□□□ -0.23
LITAF-219ENST00000576334 ACTN1P12814 892 aa13.6□□□□□ -0.23
LITAF-219ENST00000576334 SCG2P13521 617 aa13.6□□□□□ -0.23
LITAF-219ENST00000576334 ADAM17P78536 824 aa13.6□□□□□ -0.23
LITAF-219ENST00000576334 ARHGAP4P98171 946 aa13.6□□□□□ -0.23
LITAF-219ENST00000576334 ITGB3BPQ13352 177 aaPredicted RBP13.6□□□□□ -0.23
LITAF-219ENST00000576334 PPP2R2DQ66LE6 453 aa13.6□□□□□ -0.23
LITAF-219ENST00000576334 RUFY4Q6ZNE9 571 aa13.6□□□□□ -0.23
LITAF-219ENST00000576334 RUFY3Q7L099 469 aa13.6□□□□□ -0.23
LITAF-219ENST00000576334 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.6□□□□□ -0.23
LITAF-219ENST00000576334 LMBR1Q8WVP7 490 aa13.6□□□□□ -0.23
LITAF-219ENST00000576334 ZSWIM6Q9HCJ5 1215 aa13.6□□□□□ -0.23
LITAF-219ENST00000576334 PPP4R2Q9NY27 417 aa13.6□□□□□ -0.23
LITAF-219ENST00000576334 PCDHA11Q9Y5I1 949 aa13.6□□□□□ -0.23
LITAF-219ENST00000576334 SIP14410 1827 aa13.6□□□□□ -0.23
LITAF-219ENST00000576334 NID2Q14112 1375 aa13.59□□□□□ -0.23
LITAF-219ENST00000576334 KAT6AQ92794 2004 aa13.59□□□□□ -0.23
LITAF-219ENST00000576334 FAM86B1E9PN63 330 aa13.59□□□□□ -0.23
LITAF-219ENST00000576334 DDX39AO00148 427 aaKnown RBP13.59□□□□□ -0.23
LITAF-219ENST00000576334 DLL1O00548 723 aa13.59□□□□□ -0.23
LITAF-219ENST00000576334 FAM86B2P0C5J1 330 aa13.59□□□□□ -0.23
LITAF-219ENST00000576334 RCAN1P53805 252 aa13.59□□□□□ -0.23
LITAF-219ENST00000576334 STK3Q13188 491 aa13.59□□□□□ -0.23
LITAF-219ENST00000576334 CCDC85BQ15834 202 aaPredicted RBP13.59□□□□□ -0.23
LITAF-219ENST00000576334 PPP1R18Q6NYC8 613 aa13.59□□□□□ -0.23
LITAF-219ENST00000576334 FAM117BQ6P1L5 589 aa13.59□□□□□ -0.23
LITAF-219ENST00000576334 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.59□□□□□ -0.23
LITAF-219ENST00000576334 HERC6Q8IVU3 1022 aa13.59□□□□□ -0.23
LITAF-219ENST00000576334 SEPT1Q8WYJ6 367 aa13.59□□□□□ -0.23
LITAF-219ENST00000576334 SLC26A6Q9BXS9 759 aa13.59□□□□□ -0.23
LITAF-219ENST00000576334 RSPH10B2B2RC85 870 aa13.58□□□□□ -0.24
LITAF-219ENST00000576334 PRPF3O43395 683 aaKnown RBP13.58□□□□□ -0.24
LITAF-219ENST00000576334 RSPH10BP0C881 870 aa13.58□□□□□ -0.24
LITAF-219ENST00000576334 IGFBP4P22692 258 aa13.58□□□□□ -0.24
LITAF-219ENST00000576334 PSMA5P28066 241 aa13.58□□□□□ -0.24
LITAF-219ENST00000576334 SREBF1P36956 1147 aa13.58□□□□□ -0.24
LITAF-219ENST00000576334 IGBP1P78318 339 aa13.58□□□□□ -0.24
LITAF-219ENST00000576334 CEP55Q53EZ4 464 aa13.58□□□□□ -0.24
LITAF-219ENST00000576334 KRT40Q6A162 431 aa13.58□□□□□ -0.24
LITAF-219ENST00000576334 CNKSR3Q6P9H4 555 aa13.58□□□□□ -0.24
LITAF-219ENST00000576334 FBXL16Q8N461 479 aa13.58□□□□□ -0.24
LITAF-219ENST00000576334 GIMAP8Q8ND71 665 aaPredicted RBP13.58□□□□□ -0.24
LITAF-219ENST00000576334 DBF4BQ8NFT6 615 aa13.58□□□□□ -0.24
LITAF-219ENST00000576334 TRAPPC12Q8WVT3 735 aa13.58□□□□□ -0.24
LITAF-219ENST00000576334 GLG1Q92896 1179 aa13.58□□□□□ -0.24
LITAF-219ENST00000576334 CDHR1Q96JP9 859 aa13.58□□□□□ -0.24
LITAF-219ENST00000576334 AIFM3Q96NN9 605 aa13.58□□□□□ -0.24
LITAF-219ENST00000576334 SLC9A7Q96T83 725 aa13.58□□□□□ -0.24
LITAF-219ENST00000576334 AGO4Q9HCK5 861 aaKnown RBP13.58□□□□□ -0.24
LITAF-219ENST00000576334 VPS54Q9P1Q0 977 aa13.58□□□□□ -0.24
LITAF-219ENST00000576334 SLC9A2Q9UBY0 812 aa13.58□□□□□ -0.24
LITAF-219ENST00000576334 CCDC196A0A1B0GTZ2 297 aa13.57□□□□□ -0.24
LITAF-219ENST00000576334 MEIS1O00470 390 aa13.57□□□□□ -0.24
LITAF-219ENST00000576334 EDIL3O43854 480 aa13.57□□□□□ -0.24
LITAF-219ENST00000576334 LGR5O75473 907 aa13.57□□□□□ -0.24
LITAF-219ENST00000576334 CCNE2O96020 404 aa13.57□□□□□ -0.24
LITAF-219ENST00000576334 FOSP01100 380 aaPredicted RBP13.57□□□□□ -0.24
LITAF-219ENST00000576334 EVCP57679 992 aa13.57□□□□□ -0.24
LITAF-219ENST00000576334 ACTR2P61160 394 aa13.57□□□□□ -0.24
LITAF-219ENST00000576334 TAP1Q03518 808 aa13.57□□□□□ -0.24
LITAF-219ENST00000576334 MARCH8Q5T0T0 291 aa13.57□□□□□ -0.24
LITAF-219ENST00000576334 CRYGNQ8WXF5 182 aa13.57□□□□□ -0.24
LITAF-219ENST00000576334 GAS2L1Q99501 681 aaPredicted RBP13.57□□□□□ -0.24
LITAF-219ENST00000576334 ZMYND12Q9H0C1 365 aa13.57□□□□□ -0.24
LITAF-219ENST00000576334 EHMT1Q9H9B1 1298 aa13.57□□□□□ -0.24
LITAF-219ENST00000576334 JPH1Q9HDC5 661 aaPredicted RBP13.57□□□□□ -0.24
LITAF-219ENST00000576334 ZNF215Q9UL58 517 aaPredicted RBP13.57□□□□□ -0.24
LITAF-219ENST00000576334 CYP46A1Q9Y6A2 500 aa13.57□□□□□ -0.24
LITAF-219ENST00000576334 MICAL3Q7RTP6 2002 aa13.57□□□□□ -0.24
LITAF-219ENST00000576334 IGLV3-22A0A075B6J6 115 aa13.56□□□□□ -0.24
LITAF-219ENST00000576334 hCG_1984214I3L0E3 225 aa13.56□□□□□ -0.24
LITAF-219ENST00000576334 TLL1O43897 1013 aa13.56□□□□□ -0.24
LITAF-219ENST00000576334 BAIAP3O94812 1187 aa13.56□□□□□ -0.24
LITAF-219ENST00000576334 CHRNA1P02708 482 aa13.56□□□□□ -0.24
LITAF-219ENST00000576334 ZNF76P36508 570 aa13.56□□□□□ -0.24
LITAF-219ENST00000576334 KCNJ6P48051 423 aa13.56□□□□□ -0.24
LITAF-219ENST00000576334 PPFIA1Q13136 1202 aa13.56□□□□□ -0.24
LITAF-219ENST00000576334 AP3B2Q13367 1082 aa13.56□□□□□ -0.24
LITAF-219ENST00000576334 GRIK4Q16099 956 aa13.56□□□□□ -0.24
LITAF-219ENST00000576334 PLA2G4DQ86XP0 818 aa13.56□□□□□ -0.24
LITAF-219ENST00000576334 MICALL1Q8N3F8 863 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms