RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 TRIM49BA6NDI0 452 aa31.66■■■□□ 2.66
CTDNEP1-210ENST00000574322 CCZ1BP86790 482 aa31.66■■■□□ 2.66
CTDNEP1-210ENST00000574322 CCZ1P86791 482 aaPredicted RBP31.66■■■□□ 2.66
CTDNEP1-210ENST00000574322 COASYQ13057 564 aa31.66■■■□□ 2.66
CTDNEP1-210ENST00000574322 FILIP1LQ4L180 1135 aa31.66■■■□□ 2.66
CTDNEP1-210ENST00000574322 ANKRD20A12PQ8NF67 263 aa31.66■■■□□ 2.66
CTDNEP1-210ENST00000574322 DUSP9Q99956 384 aaKnown RBP31.66■■■□□ 2.66
CTDNEP1-210ENST00000574322 SLC39A2Q9NP94 309 aa31.66■■■□□ 2.66
CTDNEP1-210ENST00000574322 PXMP2Q9NR77 195 aa31.66■■■□□ 2.66
CTDNEP1-210ENST00000574322 KCNH7Q9NS40 1196 aa31.66■■■□□ 2.66
CTDNEP1-210ENST00000574322 SLITRK3O94933 977 aa31.66■■■□□ 2.66
CTDNEP1-210ENST00000574322 IDEP14735 1019 aa31.66■■■□□ 2.66
CTDNEP1-210ENST00000574322 EEF1GP26641 437 aaKnown RBP31.66■■■□□ 2.66
CTDNEP1-210ENST00000574322 PBX1P40424 430 aa31.66■■■□□ 2.66
CTDNEP1-210ENST00000574322 KRT31Q15323 416 aa31.66■■■□□ 2.66
CTDNEP1-210ENST00000574322 EPHA7Q15375 998 aa31.66■■■□□ 2.66
CTDNEP1-210ENST00000574322 ARSHQ5FYA8 562 aa31.66■■■□□ 2.66
CTDNEP1-210ENST00000574322 SPECC1LQ69YQ0 1117 aa31.66■■■□□ 2.66
CTDNEP1-210ENST00000574322 PAXIP1Q6ZW49 1069 aaPredicted RBP31.66■■■□□ 2.66
CTDNEP1-210ENST00000574322 CCDC65Q8IXS2 484 aa31.66■■■□□ 2.66
CTDNEP1-210ENST00000574322 PROCA1Q8NCQ7 364 aaPredicted RBP31.66■■■□□ 2.66
CTDNEP1-210ENST00000574322 RMDN3Q96TC7 470 aa31.66■■■□□ 2.66
CTDNEP1-210ENST00000574322 PDCD2LQ9BRP1 358 aa31.66■■■□□ 2.66
CTDNEP1-210ENST00000574322 PANK4Q9NVE7 773 aa31.66■■■□□ 2.66
CTDNEP1-210ENST00000574322 KCNJ18B7U540 433 aa31.65■■■□□ 2.66
CTDNEP1-210ENST00000574322 CXCL11O14625 94 aa31.65■■■□□ 2.66
CTDNEP1-210ENST00000574322 COBLO75128 1261 aa31.65■■■□□ 2.66
CTDNEP1-210ENST00000574322 EYA4O95677 639 aa31.65■■■□□ 2.66
CTDNEP1-210ENST00000574322 PSMC6P62333 389 aa31.65■■■□□ 2.66
CTDNEP1-210ENST00000574322 KCNJ12Q14500 433 aa31.65■■■□□ 2.66
CTDNEP1-210ENST00000574322 A0A0G2JMZ2 1700 aa31.64■■■□□ 2.66
CTDNEP1-210ENST00000574322 SSBP05455 408 aaKnown RBP eCLIP31.64■■■□□ 2.66
CTDNEP1-210ENST00000574322 SFPQP23246 707 aaKnown RBP eCLIP31.64■■■□□ 2.66
CTDNEP1-210ENST00000574322 NSMFQ6X4W1 530 aa31.64■■■□□ 2.66
CTDNEP1-210ENST00000574322 NEK9Q8TD19 979 aa31.64■■■□□ 2.66
CTDNEP1-210ENST00000574322 TRIM47Q96LD4 638 aa31.64■■■□□ 2.66
CTDNEP1-210ENST00000574322 UNC45AQ9H3U1 944 aa31.64■■■□□ 2.66
CTDNEP1-210ENST00000574322 A0A0G2JLL6 359 aaPredicted RBP31.63■■■□□ 2.65
CTDNEP1-210ENST00000574322 DHX15O43143 795 aaKnown RBP31.63■■■□□ 2.65
CTDNEP1-210ENST00000574322 HTRA3P83110 453 aa31.63■■■□□ 2.65
CTDNEP1-210ENST00000574322 BAATQ14032 418 aaPredicted RBP31.63■■■□□ 2.65
CTDNEP1-210ENST00000574322 ANKRD40Q6AI12 368 aa31.63■■■□□ 2.65
CTDNEP1-210ENST00000574322 PRRT2Q7Z6L0 340 aaPredicted RBP31.63■■■□□ 2.65
CTDNEP1-210ENST00000574322 HPS3Q969F9 1004 aa31.63■■■□□ 2.65
CTDNEP1-210ENST00000574322 AGO4Q9HCK5 861 aaKnown RBP31.63■■■□□ 2.65
CTDNEP1-210ENST00000574322 RGL1Q9NZL6 768 aa31.63■■■□□ 2.65
CTDNEP1-210ENST00000574322 PCDHA2Q9Y5H9 948 aa31.63■■■□□ 2.65
CTDNEP1-210ENST00000574322 RASSF10A6NK89 507 aa31.63■■■□□ 2.65
CTDNEP1-210ENST00000574322 HSPA6P17066 643 aa31.63■■■□□ 2.65
CTDNEP1-210ENST00000574322 DEFB115Q30KQ5 88 aa31.63■■■□□ 2.65
CTDNEP1-210ENST00000574322 RASAL3Q86YV0 1011 aa31.63■■■□□ 2.65
CTDNEP1-210ENST00000574322 SRRTQ9BXP5 876 aaKnown RBP31.63■■■□□ 2.65
CTDNEP1-210ENST00000574322 SEMA6BQ9H3T3 888 aa31.63■■■□□ 2.65
CTDNEP1-210ENST00000574322 ACAD9Q9H845 621 aa31.63■■■□□ 2.65
CTDNEP1-210ENST00000574322 OFD1O75665 1012 aa31.62■■■□□ 2.65
CTDNEP1-210ENST00000574322 SKILP12757 684 aa31.62■■■□□ 2.65
CTDNEP1-210ENST00000574322 PPIL2Q13356 520 aa31.62■■■□□ 2.65
CTDNEP1-210ENST00000574322 FAM26FQ5R3K3 315 aa31.62■■■□□ 2.65
CTDNEP1-210ENST00000574322 MB21D1Q8N884 522 aa31.62■■■□□ 2.65
CTDNEP1-210ENST00000574322 KCNH4Q9UQ05 1017 aa31.62■■■□□ 2.65
CTDNEP1-210ENST00000574322 IRF6O14896 467 aa31.61■■■□□ 2.65
CTDNEP1-210ENST00000574322 EIF2AK2P19525 551 aaKnown RBP31.61■■■□□ 2.65
CTDNEP1-210ENST00000574322 GJA5P36382 358 aa31.61■■■□□ 2.65
CTDNEP1-210ENST00000574322 COPB1P53618 953 aaKnown RBP31.61■■■□□ 2.65
CTDNEP1-210ENST00000574322 CYP4A11Q02928 519 aa31.61■■■□□ 2.65
CTDNEP1-210ENST00000574322 MKRN3Q13064 507 aaKnown RBP31.61■■■□□ 2.65
CTDNEP1-210ENST00000574322 PABPC4Q13310 644 aaKnown RBP eCLIP31.61■■■□□ 2.656e-11■□□□□ 10.8
CTDNEP1-210ENST00000574322 TREML2Q5T2D2 321 aa31.61■■■□□ 2.65
CTDNEP1-210ENST00000574322 LBX2Q6XYB7 198 aa31.61■■■□□ 2.65
CTDNEP1-210ENST00000574322 CSGALNACT2Q8N6G5 542 aa31.61■■■□□ 2.65
CTDNEP1-210ENST00000574322 CCDC102AQ96A19 550 aa31.61■■■□□ 2.65
CTDNEP1-210ENST00000574322 DYDC2Q96IM9 177 aa31.61■■■□□ 2.65
CTDNEP1-210ENST00000574322 ZFP91Q96JP5 570 aaPredicted RBP31.61■■■□□ 2.65
CTDNEP1-210ENST00000574322 TBC1D22BQ9NU19 505 aa31.61■■■□□ 2.65
CTDNEP1-210ENST00000574322 TEX33O43247 280 aa31.61■■■□□ 2.65
CTDNEP1-210ENST00000574322 LRRC63Q05C16 580 aa31.61■■■□□ 2.65
CTDNEP1-210ENST00000574322 MTMR1Q13613 665 aa31.61■■■□□ 2.65
CTDNEP1-210ENST00000574322 GIT2Q14161 759 aa31.61■■■□□ 2.65
CTDNEP1-210ENST00000574322 ARHGEF16Q5VV41 709 aa31.61■■■□□ 2.65
CTDNEP1-210ENST00000574322 SPRYD7Q5W111 196 aa31.61■■■□□ 2.65
CTDNEP1-210ENST00000574322 VSIG10LQ86VR7 867 aa31.61■■■□□ 2.65
CTDNEP1-210ENST00000574322 ITIH6Q6UXX5 1313 aa31.6■■■□□ 2.65
CTDNEP1-210ENST00000574322 SLC10A3P09131 477 aa31.6■■■□□ 2.65
CTDNEP1-210ENST00000574322 ZBTB48P10074 688 aaPredicted RBP31.6■■■□□ 2.65
CTDNEP1-210ENST00000574322 KCNJ6P48051 423 aa31.6■■■□□ 2.65
CTDNEP1-210ENST00000574322 GRM1Q13255 1194 aa31.6■■■□□ 2.65
CTDNEP1-210ENST00000574322 CYP4F22Q6NT55 531 aa31.6■■■□□ 2.65
CTDNEP1-210ENST00000574322 FAM114A1Q8IWE2 563 aa31.6■■■□□ 2.65
CTDNEP1-210ENST00000574322 CHST13Q8NET6 341 aa31.6■■■□□ 2.65
CTDNEP1-210ENST00000574322 TMX1Q9H3N1 280 aa31.6■■■□□ 2.65
CTDNEP1-210ENST00000574322 KCND1Q9NSA2 647 aa31.6■■■□□ 2.65
CTDNEP1-210ENST00000574322 MYOCDQ8IZQ8 938 aa31.59■■■□□ 2.65
CTDNEP1-210ENST00000574322 NACC1Q96RE7 527 aa31.59■■■□□ 2.65
CTDNEP1-210ENST00000574322 CYP39A1Q9NYL5 469 aa31.59■■■□□ 2.65
CTDNEP1-210ENST00000574322 LOXHD1Q8IVV2 1947 aa31.59■■■□□ 2.65
CTDNEP1-210ENST00000574322 CHMP2AO43633 222 aa31.58■■■□□ 2.65
CTDNEP1-210ENST00000574322 ITGB3BPQ13352 177 aaPredicted RBP31.58■■■□□ 2.65
CTDNEP1-210ENST00000574322 CTTNQ14247 550 aaKnown RBP31.58■■■□□ 2.65
CTDNEP1-210ENST00000574322 CCDC112Q8NEF3 446 aa31.58■■■□□ 2.65
CTDNEP1-210ENST00000574322 NSUN6Q8TEA1 469 aaKnown RBP31.58■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms