RNA–Protein interactions for RNA: ENST00000560562.5

TNFAIP2-207, Transcript of TNF alpha induced protein 2, humanhuman

TSL 1 (best)

Gene TNFAIP2, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-207ENST00000560562 SLC17A8Q8NDX2 589 aa16.03■□□□□ 0.16
TNFAIP2-207ENST00000560562 LARP6Q9BRS8 491 aaKnown RBP16.03■□□□□ 0.16
TNFAIP2-207ENST00000560562 UPF3BQ9BZI7 483 aaKnown RBP16.03■□□□□ 0.16
TNFAIP2-207ENST00000560562 FTOQ9C0B1 505 aaKnown RBP eCLIP16.03■□□□□ 0.16
TNFAIP2-207ENST00000560562 COL4A4P53420 1690 aaPredicted RBP16.03■□□□□ 0.16
TNFAIP2-207ENST00000560562 MUC3AQ02505 3323 aa16.03■□□□□ 0.16
TNFAIP2-207ENST00000560562 C17orf102A2RUQ5 167 aa16.02■□□□□ 0.16
TNFAIP2-207ENST00000560562 EPB41L2O43491 1005 aaKnown RBP16.02■□□□□ 0.16
TNFAIP2-207ENST00000560562 ARHGEF15O94989 841 aa16.02■□□□□ 0.16
TNFAIP2-207ENST00000560562 ARP10275 920 aa16.02■□□□□ 0.16
TNFAIP2-207ENST00000560562 ATP2A2P16615 1042 aaKnown RBP16.02■□□□□ 0.16
TNFAIP2-207ENST00000560562 TCF7P36402 384 aaPredicted RBP16.02■□□□□ 0.16
TNFAIP2-207ENST00000560562 SREBF1P36956 1147 aa16.02■□□□□ 0.16
TNFAIP2-207ENST00000560562 CCT2P78371 535 aaKnown RBP16.02■□□□□ 0.16
TNFAIP2-207ENST00000560562 ADAM17P78536 824 aa16.02■□□□□ 0.16
TNFAIP2-207ENST00000560562 TMCO2Q7Z6W1 182 aaPredicted RBP16.02■□□□□ 0.16
TNFAIP2-207ENST00000560562 CRYGNQ8WXF5 182 aa16.02■□□□□ 0.16
TNFAIP2-207ENST00000560562 MXRA8Q9BRK3 442 aa16.02■□□□□ 0.16
TNFAIP2-207ENST00000560562 KCNH7Q9NS40 1196 aa16.02■□□□□ 0.16
TNFAIP2-207ENST00000560562 SETD4Q9NVD3 440 aa16.02■□□□□ 0.16
TNFAIP2-207ENST00000560562 TTC28Q96AY4 2481 aa16.02■□□□□ 0.15
TNFAIP2-207ENST00000560562 PRPF3O43395 683 aaKnown RBP16.02■□□□□ 0.15
TNFAIP2-207ENST00000560562 FOSL2P15408 326 aa16.02■□□□□ 0.15
TNFAIP2-207ENST00000560562 PSMA5P28066 241 aa16.02■□□□□ 0.15
TNFAIP2-207ENST00000560562 ITGB3BPQ13352 177 aaPredicted RBP16.02■□□□□ 0.15
TNFAIP2-207ENST00000560562 RAB30Q15771 203 aa16.02■□□□□ 0.15
TNFAIP2-207ENST00000560562 JAKMIP3Q5VZ66 844 aa16.02■□□□□ 0.15
TNFAIP2-207ENST00000560562 MAFAQ8NHW3 353 aaPredicted RBP16.02■□□□□ 0.15
TNFAIP2-207ENST00000560562 LMBR1Q8WVP7 490 aa16.02■□□□□ 0.15
TNFAIP2-207ENST00000560562 ATP6V0A1Q93050 837 aa16.02■□□□□ 0.15
TNFAIP2-207ENST00000560562 CDHR1Q96JP9 859 aa16.02■□□□□ 0.15
TNFAIP2-207ENST00000560562 PCYT2Q99447 389 aa16.02■□□□□ 0.15
TNFAIP2-207ENST00000560562 PRDM12Q9H4Q4 367 aa16.02■□□□□ 0.15
TNFAIP2-207ENST00000560562 CCDC196A0A1B0GTZ2 297 aa16.01■□□□□ 0.15
TNFAIP2-207ENST00000560562 WDR5P61964 334 aaKnown RBP16.01■□□□□ 0.15
TNFAIP2-207ENST00000560562 DEFB103AP81534 67 aa16.01■□□□□ 0.15
TNFAIP2-207ENST00000560562 AP3B2Q13367 1082 aa16.01■□□□□ 0.15
TNFAIP2-207ENST00000560562 ADGRE1Q14246 886 aa16.01■□□□□ 0.15
TNFAIP2-207ENST00000560562 SPRED2Q7Z698 418 aa16.01■□□□□ 0.15
TNFAIP2-207ENST00000560562 USP38Q8NB14 1042 aa16.01■□□□□ 0.15
TNFAIP2-207ENST00000560562 GIMAP8Q8ND71 665 aaPredicted RBP16.01■□□□□ 0.15
TNFAIP2-207ENST00000560562 RASGRP4Q8TDF6 673 aa16.01■□□□□ 0.15
TNFAIP2-207ENST00000560562 ZMYND12Q9H0C1 365 aa16.01■□□□□ 0.15
TNFAIP2-207ENST00000560562 MSRAQ9UJ68 235 aa16.01■□□□□ 0.15
TNFAIP2-207ENST00000560562 PCDHA11Q9Y5I1 949 aa16.01■□□□□ 0.15
TNFAIP2-207ENST00000560562 BRWD1Q9NSI6 2320 aa16■□□□□ 0.15
TNFAIP2-207ENST00000560562 ESYT2A0FGR8 921 aa16■□□□□ 0.15
TNFAIP2-207ENST00000560562 FAM86B1E9PN63 330 aa16■□□□□ 0.15
TNFAIP2-207ENST00000560562 MEIS1O00470 390 aa16■□□□□ 0.15
TNFAIP2-207ENST00000560562 FOSP01100 380 aaPredicted RBP16■□□□□ 0.15
TNFAIP2-207ENST00000560562 FAM86B2P0C5J1 330 aa16■□□□□ 0.15
TNFAIP2-207ENST00000560562 ACTN1P12814 892 aa16■□□□□ 0.15
TNFAIP2-207ENST00000560562 IFNAR1P17181 557 aa16■□□□□ 0.15
TNFAIP2-207ENST00000560562 MARK3P27448 753 aa16■□□□□ 0.15
TNFAIP2-207ENST00000560562 THPOP40225 353 aa16■□□□□ 0.15
TNFAIP2-207ENST00000560562 ARHGAP4P98171 946 aa16■□□□□ 0.15
TNFAIP2-207ENST00000560562 CEP55Q53EZ4 464 aa16■□□□□ 0.15
TNFAIP2-207ENST00000560562 ZBTB10Q96DT7 871 aa16■□□□□ 0.15
TNFAIP2-207ENST00000560562 UIMC1Q96RL1 719 aa16■□□□□ 0.15
TNFAIP2-207ENST00000560562 SLC26A6Q9BXS9 759 aa16■□□□□ 0.15
TNFAIP2-207ENST00000560562 TM6SF1Q9BZW5 370 aa16■□□□□ 0.15
TNFAIP2-207ENST00000560562 EHMT1Q9H9B1 1298 aa16■□□□□ 0.15
TNFAIP2-207ENST00000560562 AGO4Q9HCK5 861 aaKnown RBP16■□□□□ 0.15
TNFAIP2-207ENST00000560562 JPH1Q9HDC5 661 aaPredicted RBP16■□□□□ 0.15
TNFAIP2-207ENST00000560562 ZNF215Q9UL58 517 aaPredicted RBP16■□□□□ 0.15
TNFAIP2-207ENST00000560562 RBM19Q9Y4C8 960 aaKnown RBP16■□□□□ 0.15
TNFAIP2-207ENST00000560562 NLRC5Q86WI3 1866 aa15.99■□□□□ 0.15
TNFAIP2-207ENST00000560562 IGLV3-22A0A075B6J6 115 aa15.99■□□□□ 0.15
TNFAIP2-207ENST00000560562 EDIL3O43854 480 aa15.99■□□□□ 0.15
TNFAIP2-207ENST00000560562 BAIAP3O94812 1187 aa15.99■□□□□ 0.15
TNFAIP2-207ENST00000560562 CA3P07451 260 aa15.99■□□□□ 0.15
TNFAIP2-207ENST00000560562 CTSHP09668 335 aa15.99■□□□□ 0.15
TNFAIP2-207ENST00000560562 MKRN4PQ13434 485 aaPredicted RBP15.99■□□□□ 0.15
TNFAIP2-207ENST00000560562 CNKSR3Q6P9H4 555 aa15.99■□□□□ 0.15
TNFAIP2-207ENST00000560562 RUFY4Q6ZNE9 571 aa15.99■□□□□ 0.15
TNFAIP2-207ENST00000560562 HERC6Q8IVU3 1022 aa15.99■□□□□ 0.15
TNFAIP2-207ENST00000560562 TEX2Q8IWB9 1127 aa15.99■□□□□ 0.15
TNFAIP2-207ENST00000560562 SEPT1Q8WYJ6 367 aa15.99■□□□□ 0.15
TNFAIP2-207ENST00000560562 SLC9A7Q96T83 725 aa15.99■□□□□ 0.15
TNFAIP2-207ENST00000560562 RNF26Q9BY78 433 aaPredicted RBP15.99■□□□□ 0.15
TNFAIP2-207ENST00000560562 VPS54Q9P1Q0 977 aa15.99■□□□□ 0.15
TNFAIP2-207ENST00000560562 CYP46A1Q9Y6A2 500 aa15.99■□□□□ 0.15
TNFAIP2-207ENST00000560562 MAFGO15525 162 aa15.98■□□□□ 0.15
TNFAIP2-207ENST00000560562 DTNBO60941 627 aa15.98■□□□□ 0.15
TNFAIP2-207ENST00000560562 LGR5O75473 907 aa15.98■□□□□ 0.15
TNFAIP2-207ENST00000560562 CCNE2O96020 404 aa15.98■□□□□ 0.15
TNFAIP2-207ENST00000560562 MARCH8Q5T0T0 291 aa15.98■□□□□ 0.15
TNFAIP2-207ENST00000560562 SLC28A3Q9HAS3 691 aa15.98■□□□□ 0.15
TNFAIP2-207ENST00000560562 SLC9A2Q9UBY0 812 aa15.98■□□□□ 0.15
TNFAIP2-207ENST00000560562 NFASCO94856 1347 aa15.98■□□□□ 0.15
TNFAIP2-207ENST00000560562 EMSYQ7Z589 1322 aa15.98■□□□□ 0.15
TNFAIP2-207ENST00000560562 LCHNA4D1U4 455 aa15.97■□□□□ 0.15
TNFAIP2-207ENST00000560562 EPOPA6NHQ4 379 aa15.97■□□□□ 0.15
TNFAIP2-207ENST00000560562 RSPH10B2B2RC85 870 aa15.97■□□□□ 0.15
TNFAIP2-207ENST00000560562 DHX15O43143 795 aaKnown RBP15.97■□□□□ 0.15
TNFAIP2-207ENST00000560562 RSPH10BP0C881 870 aa15.97■□□□□ 0.15
TNFAIP2-207ENST00000560562 ACTR2P61160 394 aa15.97■□□□□ 0.15
TNFAIP2-207ENST00000560562 PPP2R2DQ66LE6 453 aa15.97■□□□□ 0.15
TNFAIP2-207ENST00000560562 REXO1Q8N1G1 1221 aaKnown RBP15.97■□□□□ 0.15
TNFAIP2-207ENST00000560562 GLT8D2Q9H1C3 349 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms