RNA–Protein interactions for RNA: ENST00000553331.5

PNN-202, Transcript of pinin, desmosome associated protein, humanhuman

TSL 3 BASIC

Gene PNN, Length 656 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-202ENST00000553331 TMCO2Q7Z6W1 182 aaPredicted RBP20.48■□□□□ 0.87
PNN-202ENST00000553331 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.48■□□□□ 0.87
PNN-202ENST00000553331 SEPT1Q8WYJ6 367 aa20.48■□□□□ 0.87
PNN-202ENST00000553331 GLG1Q92896 1179 aa20.48■□□□□ 0.87
PNN-202ENST00000553331 GSTTP1A0A1W2PQM5 241 aa20.47■□□□□ 0.87
PNN-202ENST00000553331 RSPH10B2B2RC85 870 aa20.47■□□□□ 0.87
PNN-202ENST00000553331 CA3P07451 260 aa20.47■□□□□ 0.87
PNN-202ENST00000553331 RSPH10BP0C881 870 aa20.47■□□□□ 0.87
PNN-202ENST00000553331 TRAF7Q6Q0C0 670 aa20.47■□□□□ 0.87
PNN-202ENST00000553331 RUFY3Q7L099 469 aa20.47■□□□□ 0.87
PNN-202ENST00000553331 HERC6Q8IVU3 1022 aa20.47■□□□□ 0.87
PNN-202ENST00000553331 PHOSPHO2Q8TCD6 241 aa20.47■□□□□ 0.87
PNN-202ENST00000553331 LARP6Q9BRS8 491 aaKnown RBP20.47■□□□□ 0.87
PNN-202ENST00000553331 SLC26A6Q9BXS9 759 aa20.47■□□□□ 0.87
PNN-202ENST00000553331 GLT8D2Q9H1C3 349 aa20.47■□□□□ 0.87
PNN-202ENST00000553331 CERS4Q9HA82 394 aa20.47■□□□□ 0.87
PNN-202ENST00000553331 NCOA5Q9HCD5 579 aaKnown RBP20.47■□□□□ 0.87
PNN-202ENST00000553331 KCNH7Q9NS40 1196 aa20.47■□□□□ 0.87
PNN-202ENST00000553331 PTPRSQ13332 1948 aa20.47■□□□□ 0.87
PNN-202ENST00000553331 KIF28PB7ZC32 967 aa20.46■□□□□ 0.87
PNN-202ENST00000553331 MAFGO15525 162 aa20.46■□□□□ 0.87
PNN-202ENST00000553331 PRPF3O43395 683 aaKnown RBP20.46■□□□□ 0.87
PNN-202ENST00000553331 CXCL10P02778 98 aa20.46■□□□□ 0.87
PNN-202ENST00000553331 ARP10275 920 aa20.46■□□□□ 0.87
PNN-202ENST00000553331 WDR5P61964 334 aaKnown RBP20.46■□□□□ 0.87
PNN-202ENST00000553331 AP3B2Q13367 1082 aa20.46■□□□□ 0.87
PNN-202ENST00000553331 MBTPS1Q14703 1052 aa20.46■□□□□ 0.87
PNN-202ENST00000553331 LMBR1Q8WVP7 490 aa20.46■□□□□ 0.87
PNN-202ENST00000553331 UIMC1Q96RL1 719 aa20.46■□□□□ 0.87
PNN-202ENST00000553331 SDF4Q9BRK5 362 aa20.46■□□□□ 0.87
PNN-202ENST00000553331 ZBED2Q9BTP6 218 aa20.46■□□□□ 0.87
PNN-202ENST00000553331 JPH1Q9HDC5 661 aaPredicted RBP20.46■□□□□ 0.87
PNN-202ENST00000553331 CYP46A1Q9Y6A2 500 aa20.46■□□□□ 0.87
PNN-202ENST00000553331 ADAMTS3O15072 1205 aa20.45■□□□□ 0.86
PNN-202ENST00000553331 TLL1O43897 1013 aa20.45■□□□□ 0.86
PNN-202ENST00000553331 LGR5O75473 907 aa20.45■□□□□ 0.86
PNN-202ENST00000553331 PDIA3P30101 505 aaKnown RBP20.45■□□□□ 0.86
PNN-202ENST00000553331 HOXC8P31273 242 aa20.45■□□□□ 0.86
PNN-202ENST00000553331 CLK2P49760 499 aaKnown RBP20.45■□□□□ 0.86
PNN-202ENST00000553331 DEFB103AP81534 67 aa20.45■□□□□ 0.86
PNN-202ENST00000553331 IKBKEQ14164 716 aa20.45■□□□□ 0.86
PNN-202ENST00000553331 CCDC85BQ15834 202 aaPredicted RBP20.45■□□□□ 0.86
PNN-202ENST00000553331 CEP55Q53EZ4 464 aa20.45■□□□□ 0.86
PNN-202ENST00000553331 UPF3BQ9BZI7 483 aaKnown RBP20.45■□□□□ 0.86
PNN-202ENST00000553331 C6orf50Q9HD87 102 aa20.45■□□□□ 0.86
PNN-202ENST00000553331 SLC9A2Q9UBY0 812 aa20.45■□□□□ 0.86
PNN-202ENST00000553331 DDX39AO00148 427 aaKnown RBP20.44■□□□□ 0.86
PNN-202ENST00000553331 SREBF1P36956 1147 aa20.44■□□□□ 0.86
PNN-202ENST00000553331 IGBP1P78318 339 aa20.44■□□□□ 0.86
PNN-202ENST00000553331 PPFIA1Q13136 1202 aa20.44■□□□□ 0.86
PNN-202ENST00000553331 TOB2Q14106 344 aaPredicted RBP20.44■□□□□ 0.86
PNN-202ENST00000553331 PKN1Q16512 942 aa20.44■□□□□ 0.86
PNN-202ENST00000553331 FAM117BQ6P1L5 589 aa20.44■□□□□ 0.86
PNN-202ENST00000553331 FBXL16Q8N461 479 aa20.44■□□□□ 0.86
PNN-202ENST00000553331 USP38Q8NB14 1042 aa20.44■□□□□ 0.86
PNN-202ENST00000553331 CCDC12Q8WUD4 166 aaPredicted RBP20.44■□□□□ 0.86
PNN-202ENST00000553331 AGXT2Q9BYV1 514 aa20.44■□□□□ 0.86
PNN-202ENST00000553331 SMARCAD1Q9H4L7 1026 aa20.44■□□□□ 0.86
PNN-202ENST00000553331 ZSWIM6Q9HCJ5 1215 aa20.44■□□□□ 0.86
PNN-202ENST00000553331 AGO4Q9HCK5 861 aaKnown RBP20.44■□□□□ 0.86
PNN-202ENST00000553331 ERAP1Q9NZ08 941 aa20.44■□□□□ 0.86
PNN-202ENST00000553331 EMSYQ7Z589 1322 aa20.44■□□□□ 0.86
PNN-202ENST00000553331 NID2Q14112 1375 aa20.44■□□□□ 0.86
PNN-202ENST00000553331 ABHD14A-ACY1A0A1B0GW23 586 aa20.43■□□□□ 0.86
PNN-202ENST00000553331 ADGRE1Q14246 886 aa20.43■□□□□ 0.86
PNN-202ENST00000553331 DBF4BQ8NFT6 615 aa20.43■□□□□ 0.86
PNN-202ENST00000553331 AZI2Q9H6S1 392 aa20.43■□□□□ 0.86
PNN-202ENST00000553331 NRCAMQ92823 1304 aa20.43■□□□□ 0.86
PNN-202ENST00000553331 RFXAPO00287 272 aa20.42■□□□□ 0.86
PNN-202ENST00000553331 EPB41L2O43491 1005 aaKnown RBP20.42■□□□□ 0.86
PNN-202ENST00000553331 ACTR2P61160 394 aa20.42■□□□□ 0.86
PNN-202ENST00000553331 STK3Q13188 491 aa20.42■□□□□ 0.86
PNN-202ENST00000553331 ITGB3BPQ13352 177 aaPredicted RBP20.42■□□□□ 0.86
PNN-202ENST00000553331 GRIK4Q16099 956 aa20.42■□□□□ 0.86
PNN-202ENST00000553331 RUFY4Q6ZNE9 571 aa20.42■□□□□ 0.86
PNN-202ENST00000553331 PLA2G4DQ86XP0 818 aa20.42■□□□□ 0.86
PNN-202ENST00000553331 TEX2Q8IWB9 1127 aa20.42■□□□□ 0.86
PNN-202ENST00000553331 REXO1Q8N1G1 1221 aaKnown RBP20.42■□□□□ 0.86
PNN-202ENST00000553331 MICALL1Q8N3F8 863 aa20.42■□□□□ 0.86
PNN-202ENST00000553331 RASGRP4Q8TDF6 673 aa20.42■□□□□ 0.86
PNN-202ENST00000553331 ZMYND12Q9H0C1 365 aa20.42■□□□□ 0.86
PNN-202ENST00000553331 VPS54Q9P1Q0 977 aa20.42■□□□□ 0.86
PNN-202ENST00000553331 CDH23Q9H251 3354 aa20.42■□□□□ 0.86
PNN-202ENST00000553331 MEIS1O00470 390 aa20.41■□□□□ 0.86
PNN-202ENST00000553331 ARHGEF15O94989 841 aa20.41■□□□□ 0.86
PNN-202ENST00000553331 GNA11P29992 359 aa20.41■□□□□ 0.86
PNN-202ENST00000553331 ADAM17P78536 824 aa20.41■□□□□ 0.86
PNN-202ENST00000553331 NTRK3Q16288 839 aa20.41■□□□□ 0.86
PNN-202ENST00000553331 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.41■□□□□ 0.86
PNN-202ENST00000553331 ARNTL2Q8WYA1 636 aa20.41■□□□□ 0.86
PNN-202ENST00000553331 ZBTB10Q96DT7 871 aa20.41■□□□□ 0.86
PNN-202ENST00000553331 PCYT2Q99447 389 aa20.41■□□□□ 0.86
PNN-202ENST00000553331 RNF26Q9BY78 433 aaPredicted RBP20.41■□□□□ 0.86
PNN-202ENST00000553331 OSBPL7Q9BZF2 842 aa20.41■□□□□ 0.86
PNN-202ENST00000553331 PDRG1Q9NUG6 133 aa20.41■□□□□ 0.86
PNN-202ENST00000553331 TRPC6Q9Y210 931 aa20.41■□□□□ 0.86
PNN-202ENST00000553331 NFASCO94856 1347 aa20.41■□□□□ 0.86
PNN-202ENST00000553331 ESYT2A0FGR8 921 aa20.4■□□□□ 0.86
PNN-202ENST00000553331 LCHNA4D1U4 455 aa20.4■□□□□ 0.86
PNN-202ENST00000553331 FAM86B1E9PN63 330 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms