RNA–Protein interactions for RNA: ENST00000551549.1

GCN1-208, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 2

Gene GCN1, Length 258 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-208ENST00000551549 ARHGAP4P98171 946 aa11.15□□□□□ -0.62
GCN1-208ENST00000551549 MTMR1Q13613 665 aa11.15□□□□□ -0.62
GCN1-208ENST00000551549 CCDC85BQ15834 202 aaPredicted RBP11.15□□□□□ -0.62
GCN1-208ENST00000551549 BRF1Q92994 677 aa11.15□□□□□ -0.62
GCN1-208ENST00000551549 OSBPL7Q9BZF2 842 aa11.15□□□□□ -0.62
GCN1-208ENST00000551549 TMEM260Q9NX78 707 aa11.15□□□□□ -0.62
GCN1-208ENST00000551549 BARHL2Q9NY43 387 aa11.15□□□□□ -0.62
GCN1-208ENST00000551549 LCHNA4D1U4 455 aa11.14□□□□□ -0.63
GCN1-208ENST00000551549 KIF28PB7ZC32 967 aa11.14□□□□□ -0.63
GCN1-208ENST00000551549 ADAMTS3O15072 1205 aa11.14□□□□□ -0.63
GCN1-208ENST00000551549 TLL1O43897 1013 aa11.14□□□□□ -0.63
GCN1-208ENST00000551549 LGR5O75473 907 aa11.14□□□□□ -0.63
GCN1-208ENST00000551549 CTSHP09668 335 aa11.14□□□□□ -0.63
GCN1-208ENST00000551549 RPS6KB1P23443 525 aa11.14□□□□□ -0.63
GCN1-208ENST00000551549 MARK3P27448 753 aa11.14□□□□□ -0.63
GCN1-208ENST00000551549 RCAN1P53805 252 aa11.14□□□□□ -0.63
GCN1-208ENST00000551549 TAP1Q03518 808 aa11.14□□□□□ -0.63
GCN1-208ENST00000551549 PPP1R18Q6NYC8 613 aa11.14□□□□□ -0.63
GCN1-208ENST00000551549 BLOC1S2Q6QNY1 142 aa11.14□□□□□ -0.63
GCN1-208ENST00000551549 RUFY4Q6ZNE9 571 aa11.14□□□□□ -0.63
GCN1-208ENST00000551549 SPRED2Q7Z698 418 aa11.14□□□□□ -0.63
GCN1-208ENST00000551549 LMBR1Q8WVP7 490 aa11.14□□□□□ -0.63
GCN1-208ENST00000551549 ARNTL2Q8WYA1 636 aa11.14□□□□□ -0.63
GCN1-208ENST00000551549 SEPT1Q8WYJ6 367 aa11.14□□□□□ -0.63
GCN1-208ENST00000551549 MXRA8Q9BRK3 442 aa11.14□□□□□ -0.63
GCN1-208ENST00000551549 EHMT1Q9H9B1 1298 aa11.14□□□□□ -0.63
GCN1-208ENST00000551549 KCNH7Q9NS40 1196 aa11.14□□□□□ -0.63
GCN1-208ENST00000551549 ZNF215Q9UL58 517 aaPredicted RBP11.14□□□□□ -0.63
GCN1-208ENST00000551549 NCOR1O75376 2440 aa11.13□□□□□ -0.63
GCN1-208ENST00000551549 ABHD14A-ACY1A0A1B0GW23 586 aa11.13□□□□□ -0.63
GCN1-208ENST00000551549 PPFIA3O75145 1194 aa11.13□□□□□ -0.63
GCN1-208ENST00000551549 FOSP01100 380 aaPredicted RBP11.13□□□□□ -0.63
GCN1-208ENST00000551549 ARP10275 920 aa11.13□□□□□ -0.63
GCN1-208ENST00000551549 GNAT1P11488 350 aa11.13□□□□□ -0.63
GCN1-208ENST00000551549 CLK2P49760 499 aaKnown RBP11.13□□□□□ -0.63
GCN1-208ENST00000551549 ADAM17P78536 824 aa11.13□□□□□ -0.63
GCN1-208ENST00000551549 IKBKEQ14164 716 aa11.13□□□□□ -0.63
GCN1-208ENST00000551549 PFKFB3Q16875 520 aaPredicted RBP11.13□□□□□ -0.63
GCN1-208ENST00000551549 FAM117BQ6P1L5 589 aa11.13□□□□□ -0.63
GCN1-208ENST00000551549 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.13□□□□□ -0.63
GCN1-208ENST00000551549 DBF4BQ8NFT6 615 aa11.13□□□□□ -0.63
GCN1-208ENST00000551549 ZBED2Q9BTP6 218 aa11.13□□□□□ -0.63
GCN1-208ENST00000551549 ANO3Q9BYT9 981 aa11.13□□□□□ -0.63
GCN1-208ENST00000551549 AGO4Q9HCK5 861 aaKnown RBP11.13□□□□□ -0.63
GCN1-208ENST00000551549 JPH1Q9HDC5 661 aaPredicted RBP11.13□□□□□ -0.63
GCN1-208ENST00000551549 PRRC2BQ5JSZ5 2229 aaKnown RBP11.13□□□□□ -0.63
GCN1-208ENST00000551549 TANC1Q9C0D5 1861 aa11.12□□□□□ -0.63
GCN1-208ENST00000551549 EMSYQ7Z589 1322 aa11.12□□□□□ -0.63
GCN1-208ENST00000551549 CCDC196A0A1B0GTZ2 297 aa11.12□□□□□ -0.63
GCN1-208ENST00000551549 hCG_1984214I3L0E3 225 aa11.12□□□□□ -0.63
GCN1-208ENST00000551549 MAFGO15525 162 aa11.12□□□□□ -0.63
GCN1-208ENST00000551549 REC8O95072 547 aa11.12□□□□□ -0.63
GCN1-208ENST00000551549 GJB5O95377 273 aa11.12□□□□□ -0.63
GCN1-208ENST00000551549 SCG2P13521 617 aa11.12□□□□□ -0.63
GCN1-208ENST00000551549 PPFIA1Q13136 1202 aa11.12□□□□□ -0.63
GCN1-208ENST00000551549 ITGB3BPQ13352 177 aaPredicted RBP11.12□□□□□ -0.63
GCN1-208ENST00000551549 MKRN4PQ13434 485 aaPredicted RBP11.12□□□□□ -0.63
GCN1-208ENST00000551549 PKN1Q16512 942 aa11.12□□□□□ -0.63
GCN1-208ENST00000551549 CEP55Q53EZ4 464 aa11.12□□□□□ -0.63
GCN1-208ENST00000551549 PLEKHG4Q58EX7 1191 aa11.12□□□□□ -0.63
GCN1-208ENST00000551549 JAKMIP3Q5VZ66 844 aa11.12□□□□□ -0.63
GCN1-208ENST00000551549 MICALL1Q8N3F8 863 aa11.12□□□□□ -0.63
GCN1-208ENST00000551549 FBXL16Q8N461 479 aa11.12□□□□□ -0.63
GCN1-208ENST00000551549 ZNF713Q8N859 430 aaPredicted RBP11.12□□□□□ -0.63
GCN1-208ENST00000551549 GLG1Q92896 1179 aa11.12□□□□□ -0.63
GCN1-208ENST00000551549 PHKBQ93100 1093 aa11.12□□□□□ -0.63
GCN1-208ENST00000551549 ZBTB10Q96DT7 871 aa11.12□□□□□ -0.63
GCN1-208ENST00000551549 PCYT2Q99447 389 aa11.12□□□□□ -0.63
GCN1-208ENST00000551549 RAD9AQ99638 391 aa11.12□□□□□ -0.63
GCN1-208ENST00000551549 ERAP1Q9NZ08 941 aa11.12□□□□□ -0.63
GCN1-208ENST00000551549 SLC9A2Q9UBY0 812 aa11.12□□□□□ -0.63
GCN1-208ENST00000551549 NRCAMQ92823 1304 aa11.11□□□□□ -0.63
GCN1-208ENST00000551549 GBF1Q92538 1859 aa11.11□□□□□ -0.63
GCN1-208ENST00000551549 MEIS1O00470 390 aa11.11□□□□□ -0.63
GCN1-208ENST00000551549 EFCAB14O75071 495 aa11.11□□□□□ -0.63
GCN1-208ENST00000551549 CAND2O75155 1236 aa11.11□□□□□ -0.63
GCN1-208ENST00000551549 CHRNA1P02708 482 aa11.11□□□□□ -0.63
GCN1-208ENST00000551549 PSMA5P28066 241 aa11.11□□□□□ -0.63
GCN1-208ENST00000551549 SREBF1P36956 1147 aa11.11□□□□□ -0.63
GCN1-208ENST00000551549 ACTR2P61160 394 aa11.11□□□□□ -0.63
GCN1-208ENST00000551549 CCT2P78371 535 aaKnown RBP11.11□□□□□ -0.63
GCN1-208ENST00000551549 AP3B2Q13367 1082 aa11.11□□□□□ -0.63
GCN1-208ENST00000551549 GRIK4Q16099 956 aa11.11□□□□□ -0.63
GCN1-208ENST00000551549 FAM26DQ5JW98 314 aa11.11□□□□□ -0.63
GCN1-208ENST00000551549 MARCH8Q5T0T0 291 aa11.11□□□□□ -0.63
GCN1-208ENST00000551549 KRT40Q6A162 431 aa11.11□□□□□ -0.63
GCN1-208ENST00000551549 TEX2Q8IWB9 1127 aa11.11□□□□□ -0.63
GCN1-208ENST00000551549 SEPT8Q92599 483 aa11.11□□□□□ -0.63
GCN1-208ENST00000551549 UIMC1Q96RL1 719 aa11.11□□□□□ -0.63
GCN1-208ENST00000551549 SDF4Q9BRK5 362 aa11.11□□□□□ -0.63
GCN1-208ENST00000551549 AGXT2Q9BYV1 514 aa11.11□□□□□ -0.63
GCN1-208ENST00000551549 GLT8D2Q9H1C3 349 aa11.11□□□□□ -0.63
GCN1-208ENST00000551549 SMARCAD1Q9H4L7 1026 aa11.11□□□□□ -0.63
GCN1-208ENST00000551549 MTCH2Q9Y6C9 303 aa11.11□□□□□ -0.63
GCN1-208ENST00000551549 NID2Q14112 1375 aa11.11□□□□□ -0.63
GCN1-208ENST00000551549 NFASCO94856 1347 aa11.1□□□□□ -0.63
GCN1-208ENST00000551549 DOCK5Q9H7D0 1870 aa11.1□□□□□ -0.63
GCN1-208ENST00000551549 FAM86B1E9PN63 330 aa11.1□□□□□ -0.63
GCN1-208ENST00000551549 PRPF3O43395 683 aaKnown RBP11.1□□□□□ -0.63
GCN1-208ENST00000551549 AMHP03971 560 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms