RNA–Protein interactions for RNA: ENST00000550841.1

NEK3-202, Transcript of NIMA related kinase 3, humanhuman

TSL 4

Gene NEK3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-202ENST00000550841 ZNF396Q96N95 335 aaPredicted RBP24.2■■□□□ 1.46
NEK3-202ENST00000550841 MTG1Q9BT17 334 aaPredicted RBP24.2■■□□□ 1.46
NEK3-202ENST00000550841 MKI67P46013 3256 aaKnown RBP24.2■■□□□ 1.46
NEK3-202ENST00000550841 ATG7O95352 703 aa24.19■■□□□ 1.46
NEK3-202ENST00000550841 OR52Z1P0C646 297 aa24.19■■□□□ 1.46
NEK3-202ENST00000550841 JAK3P52333 1124 aa24.19■■□□□ 1.46
NEK3-202ENST00000550841 IRX5P78411 483 aaPredicted RBP24.19■■□□□ 1.46
NEK3-202ENST00000550841 PTGDRQ13258 359 aa24.19■■□□□ 1.46
NEK3-202ENST00000550841 NBR1Q14596 966 aa24.19■■□□□ 1.46
NEK3-202ENST00000550841 FOXD4L5Q5VV16 416 aaPredicted RBP24.19■■□□□ 1.46
NEK3-202ENST00000550841 FOXD4L4Q8WXT5 416 aaPredicted RBP24.19■■□□□ 1.46
NEK3-202ENST00000550841 VTI1AQ96AJ9 217 aa24.19■■□□□ 1.46
NEK3-202ENST00000550841 C11orf49Q9H6J7 331 aa24.19■■□□□ 1.46
NEK3-202ENST00000550841 COLQQ9Y215 455 aaPredicted RBP24.19■■□□□ 1.46
NEK3-202ENST00000550841 PCDHA10Q9Y5I2 948 aa24.19■■□□□ 1.46
NEK3-202ENST00000550841 ATP6V1DQ9Y5K8 247 aa24.19■■□□□ 1.46
NEK3-202ENST00000550841 GSTTP1A0A1W2PQM5 241 aa24.18■■□□□ 1.46
NEK3-202ENST00000550841 WDR64B1ANS9 1081 aa24.18■■□□□ 1.46
NEK3-202ENST00000550841 H0YGN5 161 aa24.18■■□□□ 1.46
NEK3-202ENST00000550841 TCF7P36402 384 aaPredicted RBP24.18■■□□□ 1.46
NEK3-202ENST00000550841 TXKP42681 527 aa24.18■■□□□ 1.46
NEK3-202ENST00000550841 MNX1P50219 401 aaPredicted RBP24.18■■□□□ 1.46
NEK3-202ENST00000550841 PURAQ00577 322 aaKnown RBP24.18■■□□□ 1.46
NEK3-202ENST00000550841 PPP2R5CQ13362 524 aa24.18■■□□□ 1.46
NEK3-202ENST00000550841 PKP1Q13835 747 aa24.18■■□□□ 1.46
NEK3-202ENST00000550841 ATL3Q6DD88 541 aa24.18■■□□□ 1.46
NEK3-202ENST00000550841 C4orf32Q8N8J7 132 aa24.18■■□□□ 1.46
NEK3-202ENST00000550841 HTATIP2Q9BUP3 242 aa24.18■■□□□ 1.46
NEK3-202ENST00000550841 KATNAL1Q9BW62 490 aa24.18■■□□□ 1.46
NEK3-202ENST00000550841 SEZ6LQ9BYH1 1024 aa24.18■■□□□ 1.46
NEK3-202ENST00000550841 TMEM60Q9H2L4 133 aa24.18■■□□□ 1.46
NEK3-202ENST00000550841 AZI2Q9H6S1 392 aa24.18■■□□□ 1.46
NEK3-202ENST00000550841 TTC12Q9H892 705 aaPredicted RBP24.18■■□□□ 1.46
NEK3-202ENST00000550841 SAMM50Q9Y512 469 aa24.18■■□□□ 1.46
NEK3-202ENST00000550841 CCNE2O96020 404 aa24.17■■□□□ 1.46
NEK3-202ENST00000550841 PSAPP07602 524 aa24.17■■□□□ 1.46
NEK3-202ENST00000550841 PRPHP41219 470 aa24.17■■□□□ 1.46
NEK3-202ENST00000550841 TMEM266Q2M3C6 531 aa24.17■■□□□ 1.46
NEK3-202ENST00000550841 CXCL17Q6UXB2 119 aa24.17■■□□□ 1.46
NEK3-202ENST00000550841 ABHD15Q6UXT9 468 aa24.17■■□□□ 1.46
NEK3-202ENST00000550841 GJA10Q969M2 543 aa24.17■■□□□ 1.46
NEK3-202ENST00000550841 PAWRQ96IZ0 340 aaKnown RBP24.17■■□□□ 1.46
NEK3-202ENST00000550841 IPO9Q96P70 1041 aaKnown RBP24.17■■□□□ 1.46
NEK3-202ENST00000550841 SENP6Q9GZR1 1112 aaPredicted RBP24.17■■□□□ 1.46
NEK3-202ENST00000550841 SMARCAD1Q9H4L7 1026 aa24.17■■□□□ 1.46
NEK3-202ENST00000550841 DISC1Q9NRI5 854 aa24.17■■□□□ 1.46
NEK3-202ENST00000550841 CIZ1Q9ULV3 898 aaPredicted RBP24.17■■□□□ 1.46
NEK3-202ENST00000550841 DOCK5Q9H7D0 1870 aa24.17■■□□□ 1.46
NEK3-202ENST00000550841 COL6A1P12109 1028 aa24.16■■□□□ 1.46
NEK3-202ENST00000550841 DDIT3P35638 169 aa24.16■■□□□ 1.46
NEK3-202ENST00000550841 UTP14CQ5TAP6 766 aaKnown RBP24.16■■□□□ 1.46
NEK3-202ENST00000550841 FAM160B1Q5W0V3 765 aa24.16■■□□□ 1.46
NEK3-202ENST00000550841 MIER3Q7Z3K6 550 aa24.16■■□□□ 1.46
NEK3-202ENST00000550841 RAB34Q9BZG1 259 aa24.16■■□□□ 1.46
NEK3-202ENST00000550841 UNC45AQ9H3U1 944 aa24.16■■□□□ 1.46
NEK3-202ENST00000550841 STARD7Q9NQZ5 370 aa24.16■■□□□ 1.46
NEK3-202ENST00000550841 ZNF215Q9UL58 517 aaPredicted RBP24.16■■□□□ 1.46
NEK3-202ENST00000550841 A0A1W2PQ45 241 aaPredicted RBP24.15■■□□□ 1.46
NEK3-202ENST00000550841 A0A1W2PQY0 241 aa24.15■■□□□ 1.46
NEK3-202ENST00000550841 LGALS2P05162 132 aa24.15■■□□□ 1.46
NEK3-202ENST00000550841 SUPT20HL2P0C7V6 817 aa24.15■■□□□ 1.46
NEK3-202ENST00000550841 ATP2C1P98194 919 aaPredicted RBP24.15■■□□□ 1.46
NEK3-202ENST00000550841 SF3A1Q15459 793 aaKnown RBP24.15■■□□□ 1.46
NEK3-202ENST00000550841 ARL6IP4Q66PJ3 421 aaKnown RBP24.15■■□□□ 1.46
NEK3-202ENST00000550841 FAM173BQ6P4H8 233 aa24.15■■□□□ 1.46
NEK3-202ENST00000550841 B3GNT9Q6UX72 402 aa24.15■■□□□ 1.46
NEK3-202ENST00000550841 DTHD1Q6ZMT9 781 aa24.15■■□□□ 1.46
NEK3-202ENST00000550841 PLPPR4Q7Z2D5 763 aa24.15■■□□□ 1.46
NEK3-202ENST00000550841 GLG1Q92896 1179 aa24.15■■□□□ 1.46
NEK3-202ENST00000550841 TNPO1Q92973 898 aaKnown RBP24.15■■□□□ 1.46
NEK3-202ENST00000550841 FERMT2Q96AC1 680 aa24.15■■□□□ 1.46
NEK3-202ENST00000550841 VAV3Q9UKW4 847 aa24.15■■□□□ 1.46
NEK3-202ENST00000550841 ZDHHC9Q9Y397 364 aa24.15■■□□□ 1.46
NEK3-202ENST00000550841 IGKV6D-21A0A0A0MT36 114 aa24.14■■□□□ 1.45
NEK3-202ENST00000550841 H3BRB1 525 aa24.14■■□□□ 1.45
NEK3-202ENST00000550841 BACH1O14867 736 aa24.14■■□□□ 1.45
NEK3-202ENST00000550841 CHMP2AO43633 222 aa24.14■■□□□ 1.45
NEK3-202ENST00000550841 LGR5O75473 907 aa24.14■■□□□ 1.45
NEK3-202ENST00000550841 SLC26A2P50443 739 aa24.14■■□□□ 1.45
NEK3-202ENST00000550841 STAT5BP51692 787 aa24.14■■□□□ 1.45
NEK3-202ENST00000550841 PDIA5Q14554 519 aa24.14■■□□□ 1.45
NEK3-202ENST00000550841 UBE2Q1Q7Z7E8 422 aa24.14■■□□□ 1.45
NEK3-202ENST00000550841 DIS3LQ8TF46 1054 aaKnown RBP24.14■■□□□ 1.45
NEK3-202ENST00000550841 C16orf70Q9BSU1 422 aa24.14■■□□□ 1.45
NEK3-202ENST00000550841 TUT1Q9H6E5 874 aaKnown RBP24.14■■□□□ 1.45
NEK3-202ENST00000550841 CFAP45Q9UL16 551 aa24.14■■□□□ 1.45
NEK3-202ENST00000550841 STK24Q9Y6E0 443 aa24.14■■□□□ 1.45
NEK3-202ENST00000550841 BRCA2P51587 3418 aa24.14■■□□□ 1.45
NEK3-202ENST00000550841 EMSYQ7Z589 1322 aa24.13■■□□□ 1.45
NEK3-202ENST00000550841 A0A0U1RQG5 324 aaPredicted RBP24.13■■□□□ 1.45
NEK3-202ENST00000550841 TECP42680 631 aa24.13■■□□□ 1.45
NEK3-202ENST00000550841 FXR1P51114 621 aaKnown RBP eCLIP24.13■■□□□ 1.45
NEK3-202ENST00000550841 EPHA7Q15375 998 aa24.13■■□□□ 1.45
NEK3-202ENST00000550841 SWSAP1Q6NVH7 229 aa24.13■■□□□ 1.45
NEK3-202ENST00000550841 ZNF302Q9NR11 478 aa24.13■■□□□ 1.45
NEK3-202ENST00000550841 ERAP1Q9NZ08 941 aa24.13■■□□□ 1.45
NEK3-202ENST00000550841 TELO2Q9Y4R8 837 aa24.13■■□□□ 1.45
NEK3-202ENST00000550841 CLIC4Q9Y696 253 aa24.13■■□□□ 1.45
NEK3-202ENST00000550841 DKC1O60832 514 aaKnown RBP eCLIP24.12■■□□□ 1.45
NEK3-202ENST00000550841 F2P00734 622 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms