RNA–Protein interactions for RNA: ENST00000550070.6

ERBB3-214, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,729 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-214ENST00000550070 CEP72Q9P209 647 aa11.33□□□□□ -0.6
ERBB3-214ENST00000550070 ANKIB1Q9P2G1 1089 aa11.33□□□□□ -0.6
ERBB3-214ENST00000550070 PACSIN2Q9UNF0 486 aaPredicted RBP11.33□□□□□ -0.6
ERBB3-214ENST00000550070 SAMM50Q9Y512 469 aa11.33□□□□□ -0.6
ERBB3-214ENST00000550070 COL4A3BPQ9Y5P4 624 aa11.33□□□□□ -0.6
ERBB3-214ENST00000550070 TRAF5O00463 557 aa11.32□□□□□ -0.6
ERBB3-214ENST00000550070 HEXIM1O94992 359 aaKnown RBP11.32□□□□□ -0.6
ERBB3-214ENST00000550070 SERPING1P05155 500 aa11.32□□□□□ -0.6
ERBB3-214ENST00000550070 LIG3P49916 1009 aa11.32□□□□□ -0.6
ERBB3-214ENST00000550070 POLR2FP61218 127 aaKnown RBP11.32□□□□□ -0.6
ERBB3-214ENST00000550070 GUCY2DQ02846 1103 aa11.32□□□□□ -0.6
ERBB3-214ENST00000550070 COASYQ13057 564 aa11.32□□□□□ -0.6
ERBB3-214ENST00000550070 NNTQ13423 1086 aa11.32□□□□□ -0.6
ERBB3-214ENST00000550070 TRADDQ15628 312 aa11.32□□□□□ -0.6
ERBB3-214ENST00000550070 NAB2Q15742 525 aa11.32□□□□□ -0.6
ERBB3-214ENST00000550070 KRT79Q5XKE5 535 aa11.32□□□□□ -0.6
ERBB3-214ENST00000550070 MYOCDQ8IZQ8 938 aa11.32□□□□□ -0.6
ERBB3-214ENST00000550070 IFT81Q8WYA0 676 aa11.32□□□□□ -0.6
ERBB3-214ENST00000550070 GJA10Q969M2 543 aa11.32□□□□□ -0.6
ERBB3-214ENST00000550070 KANSL2Q9H9L4 492 aa11.32□□□□□ -0.6
ERBB3-214ENST00000550070 POLD4Q9HCU8 107 aa11.32□□□□□ -0.6
ERBB3-214ENST00000550070 TSKSQ9UJT2 592 aa11.32□□□□□ -0.6
ERBB3-214ENST00000550070 SHTN1A0MZ66 631 aa11.32□□□□□ -0.6
ERBB3-214ENST00000550070 ZNF233A6NK53 670 aa11.32□□□□□ -0.6
ERBB3-214ENST00000550070 BTDP43251 543 aa11.32□□□□□ -0.6
ERBB3-214ENST00000550070 ATP1A2P50993 1020 aa11.32□□□□□ -0.6
ERBB3-214ENST00000550070 RNASE9P60153 205 aaKnown RBP11.32□□□□□ -0.6
ERBB3-214ENST00000550070 FKBP3Q00688 224 aaKnown RBP11.32□□□□□ -0.6
ERBB3-214ENST00000550070 CCDC40Q4G0X9 1142 aa11.32□□□□□ -0.6
ERBB3-214ENST00000550070 ICE2Q659A1 982 aa11.32□□□□□ -0.6
ERBB3-214ENST00000550070 TBC1D5Q92609 795 aa11.32□□□□□ -0.6
ERBB3-214ENST00000550070 FAM210AQ96ND0 272 aa11.32□□□□□ -0.6
ERBB3-214ENST00000550070 LSM14BQ9BX40 385 aaKnown RBP11.32□□□□□ -0.6
ERBB3-214ENST00000550070 FAM107BQ9H098 131 aa11.32□□□□□ -0.6
ERBB3-214ENST00000550070 ZNF287Q9HBT7 754 aa11.32□□□□□ -0.6
ERBB3-214ENST00000550070 TBC1D7Q9P0N9 293 aa11.32□□□□□ -0.6
ERBB3-214ENST00000550070 RNF14Q9UBS8 474 aa11.32□□□□□ -0.6
ERBB3-214ENST00000550070 THRAP3Q9Y2W1 955 aaKnown RBP11.32□□□□□ -0.6
ERBB3-214ENST00000550070 SPATA31A5Q5VU36 1347 aa11.31□□□□□ -0.6
ERBB3-214ENST00000550070 SPATA31A7Q8IWB4 1347 aa11.31□□□□□ -0.6
ERBB3-214ENST00000550070 MEI1Q5TIA1 1274 aa11.31□□□□□ -0.6
ERBB3-214ENST00000550070 WDR78Q5VTH9 848 aa11.31□□□□□ -0.6
ERBB3-214ENST00000550070 CACTIN-AS1Q8N1I8 211 aa11.31□□□□□ -0.6
ERBB3-214ENST00000550070 PROM2Q8N271 834 aa11.31□□□□□ -0.6
ERBB3-214ENST00000550070 CASKIN2Q8WXE0 1202 aa11.31□□□□□ -0.6
ERBB3-214ENST00000550070 SYN2Q92777 582 aaPredicted RBP11.31□□□□□ -0.6
ERBB3-214ENST00000550070 KAT2BQ92831 832 aa11.31□□□□□ -0.6
ERBB3-214ENST00000550070 KRT12Q99456 494 aa11.31□□□□□ -0.6
ERBB3-214ENST00000550070 PACSIN1Q9BY11 444 aa11.31□□□□□ -0.6
ERBB3-214ENST00000550070 NARFQ9UHQ1 456 aa11.31□□□□□ -0.6
ERBB3-214ENST00000550070 ATP6V0A2Q9Y487 856 aa11.31□□□□□ -0.6
ERBB3-214ENST00000550070 A0A087X0T9 212 aa11.31□□□□□ -0.6
ERBB3-214ENST00000550070 COQ9O75208 318 aa11.31□□□□□ -0.6
ERBB3-214ENST00000550070 LDHCP07864 332 aa11.31□□□□□ -0.6
ERBB3-214ENST00000550070 FAM228BP0C875 321 aa11.31□□□□□ -0.6
ERBB3-214ENST00000550070 PDHBP11177 359 aa11.31□□□□□ -0.6
ERBB3-214ENST00000550070 ADCY7P51828 1080 aa11.31□□□□□ -0.6
ERBB3-214ENST00000550070 GUCY2FP51841 1108 aa11.31□□□□□ -0.6
ERBB3-214ENST00000550070 ARID5AQ03989 594 aa11.31□□□□□ -0.6
ERBB3-214ENST00000550070 NFIXQ14938 502 aa11.31□□□□□ -0.6
ERBB3-214ENST00000550070 CFAP58Q5T655 872 aa11.31□□□□□ -0.6
ERBB3-214ENST00000550070 FOXR2Q6PJQ5 311 aa11.31□□□□□ -0.6
ERBB3-214ENST00000550070 TPTE2Q6XPS3 522 aa11.31□□□□□ -0.6
ERBB3-214ENST00000550070 RAB34Q9BZG1 259 aa11.31□□□□□ -0.6
ERBB3-214ENST00000550070 PANK4Q9NVE7 773 aa11.31□□□□□ -0.6
ERBB3-214ENST00000550070 UNCXA6NJT0 531 aa11.3□□□□□ -0.6
ERBB3-214ENST00000550070 ERLIN2O94905 339 aa11.3□□□□□ -0.6
ERBB3-214ENST00000550070 PAK2Q13177 524 aa11.3□□□□□ -0.6
ERBB3-214ENST00000550070 ENOX2Q16206 610 aaKnown RBP11.3□□□□□ -0.6
ERBB3-214ENST00000550070 SLC18A3Q16572 532 aa11.3□□□□□ -0.6
ERBB3-214ENST00000550070 PUS10Q3MIT2 529 aaKnown RBP11.3□□□□□ -0.6
ERBB3-214ENST00000550070 ARHGAP27Q6ZUM4 889 aa11.3□□□□□ -0.6
ERBB3-214ENST00000550070 TEX11Q8IYF3 940 aa11.3□□□□□ -0.6
ERBB3-214ENST00000550070 HAS1Q92839 578 aa11.3□□□□□ -0.6
ERBB3-214ENST00000550070 RNPC3Q96LT9 517 aaKnown RBP11.3□□□□□ -0.6
ERBB3-214ENST00000550070 INPP4AQ96PE3 977 aaPredicted RBP11.3□□□□□ -0.6
ERBB3-214ENST00000550070 LRRC27Q9C0I9 530 aa11.3□□□□□ -0.6
ERBB3-214ENST00000550070 NUCKS1Q9H1E3 243 aaKnown RBP11.3□□□□□ -0.6
ERBB3-214ENST00000550070 PCDHGC5Q9Y5F6 944 aa11.3□□□□□ -0.6
ERBB3-214ENST00000550070 NOVP48745 357 aa11.3□□□□□ -0.6
ERBB3-214ENST00000550070 TNNI2P48788 182 aa11.3□□□□□ -0.6
ERBB3-214ENST00000550070 IRF5Q13568 498 aa11.3□□□□□ -0.6
ERBB3-214ENST00000550070 UBE2SQ16763 222 aa11.3□□□□□ -0.6
ERBB3-214ENST00000550070 FAM26FQ5R3K3 315 aa11.3□□□□□ -0.6
ERBB3-214ENST00000550070 NELFCDQ8IXH7 590 aa11.3□□□□□ -0.6
ERBB3-214ENST00000550070 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.3□□□□□ -0.6
ERBB3-214ENST00000550070 ADAMTS1Q9UHI8 967 aa11.3□□□□□ -0.6
ERBB3-214ENST00000550070 COL24A1Q17RW2 1714 aa11.3□□□□□ -0.6
ERBB3-214ENST00000550070 NRAPQ86VF7 1730 aa11.3□□□□□ -0.6
ERBB3-214ENST00000550070 GRID2IPA4D2P6 1211 aa11.29□□□□□ -0.6
ERBB3-214ENST00000550070 CACNB1Q02641 598 aaPredicted RBP11.29□□□□□ -0.6
ERBB3-214ENST00000550070 RAPGEF1Q13905 1077 aa11.29□□□□□ -0.6
ERBB3-214ENST00000550070 CDC37Q16543 378 aaPredicted RBP11.29□□□□□ -0.6
ERBB3-214ENST00000550070 KIAA0753Q2KHM9 967 aa11.29□□□□□ -0.6
ERBB3-214ENST00000550070 KDM7AQ6ZMT4 941 aa11.29□□□□□ -0.6
ERBB3-214ENST00000550070 TRIM59Q8IWR1 403 aa11.29□□□□□ -0.6
ERBB3-214ENST00000550070 MREGQ8N565 214 aa11.29□□□□□ -0.6
ERBB3-214ENST00000550070 FAM133AQ8N9E0 248 aa11.29□□□□□ -0.6
ERBB3-214ENST00000550070 UIMC1Q96RL1 719 aa11.29□□□□□ -0.6
ERBB3-214ENST00000550070 LEMD3Q9Y2U8 911 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms