RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 CHRDL2Q6WN34 429 aa21.97■■□□□ 1.11
DDX55-207ENST00000540763 BRAPQ7Z569 592 aa21.97■■□□□ 1.11
DDX55-207ENST00000540763 SLFN12Q8IYM2 578 aa21.97■■□□□ 1.11
DDX55-207ENST00000540763 C16orf70Q9BSU1 422 aa21.97■■□□□ 1.11
DDX55-207ENST00000540763 ZNF215Q9UL58 517 aaPredicted RBP21.97■■□□□ 1.11
DDX55-207ENST00000540763 KAT6AQ92794 2004 aa21.96■■□□□ 1.11
DDX55-207ENST00000540763 GSTTP1A0A1W2PQM5 241 aa21.96■■□□□ 1.11
DDX55-207ENST00000540763 VPS37CA5D8V6 355 aaPredicted RBP21.96■■□□□ 1.11
DDX55-207ENST00000540763 ARVCFO00192 962 aa21.96■■□□□ 1.11
DDX55-207ENST00000540763 HAS3O00219 553 aa21.96■■□□□ 1.11
DDX55-207ENST00000540763 NEMFO60524 1076 aa21.96■■□□□ 1.11
DDX55-207ENST00000540763 LGR5O75473 907 aa21.96■■□□□ 1.11
DDX55-207ENST00000540763 CDK7P50613 346 aa21.96■■□□□ 1.11
DDX55-207ENST00000540763 PTPN11Q06124 597 aaPredicted RBP21.96■■□□□ 1.11
DDX55-207ENST00000540763 ITGA7Q13683 1181 aa21.96■■□□□ 1.11
DDX55-207ENST00000540763 TTC38Q5R3I4 469 aa21.96■■□□□ 1.11
DDX55-207ENST00000540763 NFRKBQ6P4R8 1299 aa21.96■■□□□ 1.11
DDX55-207ENST00000540763 ANKRD33Q7Z3H0 272 aa21.96■■□□□ 1.11
DDX55-207ENST00000540763 SESTD1Q86VW0 696 aa21.96■■□□□ 1.11
DDX55-207ENST00000540763 POTEDQ86YR6 584 aa21.96■■□□□ 1.11
DDX55-207ENST00000540763 RDM1Q8NG50 284 aa21.96■■□□□ 1.11
DDX55-207ENST00000540763 KAT2BQ92831 832 aa21.96■■□□□ 1.11
DDX55-207ENST00000540763 VTI1AQ96AJ9 217 aa21.96■■□□□ 1.11
DDX55-207ENST00000540763 FOXD4L1Q9NU39 408 aa21.96■■□□□ 1.11
DDX55-207ENST00000540763 STX6O43752 255 aa21.95■■□□□ 1.1
DDX55-207ENST00000540763 BAG4O95429 457 aaKnown RBP21.95■■□□□ 1.1
DDX55-207ENST00000540763 CCNE2O96020 404 aa21.95■■□□□ 1.1
DDX55-207ENST00000540763 ZNF286BP0CG31 522 aa21.95■■□□□ 1.1
DDX55-207ENST00000540763 SFNP31947 248 aa21.95■■□□□ 1.1
DDX55-207ENST00000540763 ATN1P54259 1190 aaPredicted RBP21.95■■□□□ 1.1
DDX55-207ENST00000540763 SP4Q02446 784 aa21.95■■□□□ 1.1
DDX55-207ENST00000540763 B3GNT9Q6UX72 402 aa21.95■■□□□ 1.1
DDX55-207ENST00000540763 TOX2Q96NM4 488 aa21.95■■□□□ 1.1
DDX55-207ENST00000540763 IGKV6D-21A0A0A0MT36 114 aa21.94■■□□□ 1.1
DDX55-207ENST00000540763 WDR64B1ANS9 1081 aa21.94■■□□□ 1.1
DDX55-207ENST00000540763 H3BRB1 525 aa21.94■■□□□ 1.1
DDX55-207ENST00000540763 DDX39AO00148 427 aaKnown RBP21.94■■□□□ 1.1
DDX55-207ENST00000540763 WNT7AO00755 349 aa21.94■■□□□ 1.1
DDX55-207ENST00000540763 PSEN2P49810 448 aa21.94■■□□□ 1.1
DDX55-207ENST00000540763 JAK3P52333 1124 aa21.94■■□□□ 1.1
DDX55-207ENST00000540763 RTP1P59025 263 aa21.94■■□□□ 1.1
DDX55-207ENST00000540763 PPP2R5CQ13362 524 aa21.94■■□□□ 1.1
DDX55-207ENST00000540763 MFSD10Q14728 455 aa21.94■■□□□ 1.1
DDX55-207ENST00000540763 CALCRLQ16602 461 aa21.94■■□□□ 1.1
DDX55-207ENST00000540763 ABHD15Q6UXT9 468 aa21.94■■□□□ 1.1
DDX55-207ENST00000540763 HAS1Q92839 578 aa21.94■■□□□ 1.1
DDX55-207ENST00000540763 SMARCAD1Q9H4L7 1026 aa21.94■■□□□ 1.1
DDX55-207ENST00000540763 TUT1Q9H6E5 874 aaKnown RBP21.94■■□□□ 1.1
DDX55-207ENST00000540763 TELO2Q9Y4R8 837 aa21.94■■□□□ 1.1
DDX55-207ENST00000540763 NR2E3Q9Y5X4 410 aa21.94■■□□□ 1.1
DDX55-207ENST00000540763 GRIN2DO15399 1336 aa21.94■■□□□ 1.1
DDX55-207ENST00000540763 SUPT20HL2P0C7V6 817 aa21.93■■□□□ 1.1
DDX55-207ENST00000540763 MCM7P33993 719 aa21.93■■□□□ 1.1
DDX55-207ENST00000540763 SLC26A2P50443 739 aa21.93■■□□□ 1.1
DDX55-207ENST00000540763 TOB1P50616 345 aaPredicted RBP21.93■■□□□ 1.1
DDX55-207ENST00000540763 PSMC6P62333 389 aa21.93■■□□□ 1.1
DDX55-207ENST00000540763 MIS18BP1Q6P0N0 1132 aa21.93■■□□□ 1.1
DDX55-207ENST00000540763 PLPPR4Q7Z2D5 763 aa21.93■■□□□ 1.1
DDX55-207ENST00000540763 AFAP1L1Q8TED9 768 aa21.93■■□□□ 1.1
DDX55-207ENST00000540763 MTMR9Q96QG7 549 aa21.93■■□□□ 1.1
DDX55-207ENST00000540763 AZI2Q9H6S1 392 aa21.93■■□□□ 1.1
DDX55-207ENST00000540763 ERAP1Q9NZ08 941 aa21.93■■□□□ 1.1
DDX55-207ENST00000540763 MTMR6Q9Y217 621 aa21.93■■□□□ 1.1
DDX55-207ENST00000540763 PCDHA10Q9Y5I2 948 aa21.93■■□□□ 1.1
DDX55-207ENST00000540763 LAD1O00515 517 aa21.92■■□□□ 1.1
DDX55-207ENST00000540763 PSAPP07602 524 aa21.92■■□□□ 1.1
DDX55-207ENST00000540763 KIAA0753Q2KHM9 967 aa21.92■■□□□ 1.1
DDX55-207ENST00000540763 NBPF20Q3BBV1 942 aa21.92■■□□□ 1.1
DDX55-207ENST00000540763 TRIM60Q495X7 471 aa21.92■■□□□ 1.1
DDX55-207ENST00000540763 UNC45AQ9H3U1 944 aa21.92■■□□□ 1.1
DDX55-207ENST00000540763 ZSCAN16Q9H4T2 348 aaPredicted RBP21.92■■□□□ 1.1
DDX55-207ENST00000540763 VAV3Q9UKW4 847 aa21.92■■□□□ 1.1
DDX55-207ENST00000540763 TLR3O15455 904 aaKnown RBP21.91■■□□□ 1.1
DDX55-207ENST00000540763 MARCH6O60337 910 aa21.91■■□□□ 1.1
DDX55-207ENST00000540763 EVI5O60447 810 aa21.91■■□□□ 1.1
DDX55-207ENST00000540763 ATP2B1P20020 1258 aa21.91■■□□□ 1.1
DDX55-207ENST00000540763 UTP14CQ5TAP6 766 aaKnown RBP21.91■■□□□ 1.1
DDX55-207ENST00000540763 FAM160B1Q5W0V3 765 aa21.91■■□□□ 1.1
DDX55-207ENST00000540763 TRIM50Q86XT4 487 aa21.91■■□□□ 1.1
DDX55-207ENST00000540763 FAM126BQ8IXS8 530 aa21.91■■□□□ 1.1
DDX55-207ENST00000540763 TNPO1Q92973 898 aaKnown RBP21.91■■□□□ 1.1
DDX55-207ENST00000540763 PCYT2Q99447 389 aa21.91■■□□□ 1.1
DDX55-207ENST00000540763 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.91■■□□□ 1.1
DDX55-207ENST00000540763 DISC1Q9NRI5 854 aa21.91■■□□□ 1.1
DDX55-207ENST00000540763 LTBP2Q14767 1821 aa21.91■■□□□ 1.1
DDX55-207ENST00000540763 TRIP12Q14669 1992 aaPredicted RBP21.9■■□□□ 1.1
DDX55-207ENST00000540763 IGSF9BQ9UPX0 1349 aa21.9■■□□□ 1.1
DDX55-207ENST00000540763 DCDC2CA8MYV0 355 aa21.9■■□□□ 1.1
DDX55-207ENST00000540763 OR52Z1P0C646 297 aa21.9■■□□□ 1.1
DDX55-207ENST00000540763 STAT5BP51692 787 aa21.9■■□□□ 1.1
DDX55-207ENST00000540763 RESTQ13127 1097 aa21.9■■□□□ 1.1
DDX55-207ENST00000540763 ZNF174Q15697 407 aa21.9■■□□□ 1.1
DDX55-207ENST00000540763 MIER3Q7Z3K6 550 aa21.9■■□□□ 1.1
DDX55-207ENST00000540763 GLG1Q92896 1179 aa21.9■■□□□ 1.1
DDX55-207ENST00000540763 UIMC1Q96RL1 719 aa21.9■■□□□ 1.1
DDX55-207ENST00000540763 GTF2IRD1Q9UHL9 959 aa21.9■■□□□ 1.1
DDX55-207ENST00000540763 ATP11BQ9Y2G3 1177 aa21.9■■□□□ 1.1
DDX55-207ENST00000540763 SAMM50Q9Y512 469 aa21.9■■□□□ 1.1
DDX55-207ENST00000540763 PCDHB6Q9Y5E3 794 aa21.9■■□□□ 1.1
DDX55-207ENST00000540763 BMP15O95972 392 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms