RNA–Protein interactions for RNA: ENST00000534284.1

CYCSP28-201, Transcript of cytochrome c, somatic pseudogene 28, humanhuman

BASIC

Gene CYCSP28, Length 321 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP28-201ENST00000534284 SMAD5Q99717 465 aaKnown RBP5.52□□□□□ -1.53
CYCSP28-201ENST00000534284 PLVAPQ9BX97 442 aa5.52□□□□□ -1.53
CYCSP28-201ENST00000534284 ASPNQ9BXN1 380 aa5.52□□□□□ -1.53
CYCSP28-201ENST00000534284 PANK2Q9BZ23 570 aa5.52□□□□□ -1.53
CYCSP28-201ENST00000534284 TM6SF1Q9BZW5 370 aa5.52□□□□□ -1.53
CYCSP28-201ENST00000534284 ASCC2Q9H1I8 757 aaPredicted RBP5.52□□□□□ -1.53
CYCSP28-201ENST00000534284 GABBR1Q9UBS5 961 aa5.52□□□□□ -1.53
CYCSP28-201ENST00000534284 CCDC39Q9UFE4 941 aa5.52□□□□□ -1.53
CYCSP28-201ENST00000534284 SF3B6Q9Y3B4 125 aaKnown RBP5.52□□□□□ -1.53
CYCSP28-201ENST00000534284 LMO7Q8WWI1 1683 aa5.52□□□□□ -1.53
CYCSP28-201ENST00000534284 ABCC6O95255 1503 aa5.52□□□□□ -1.53
CYCSP28-201ENST00000534284 AK9Q5TCS8 1911 aa5.52□□□□□ -1.53
CYCSP28-201ENST00000534284 A0A087WZG4 1122 aa5.51□□□□□ -1.53
CYCSP28-201ENST00000534284 FAM229AH3BQW9 127 aa5.51□□□□□ -1.53
CYCSP28-201ENST00000534284 SHOXO15266 292 aa5.51□□□□□ -1.53
CYCSP28-201ENST00000534284 SGSM2O43147 1006 aa5.51□□□□□ -1.53
CYCSP28-201ENST00000534284 ZNF500O60304 480 aaPredicted RBP5.51□□□□□ -1.53
CYCSP28-201ENST00000534284 RASGRP1O95267 797 aa5.51□□□□□ -1.53
CYCSP28-201ENST00000534284 DDX58O95786 925 aaKnown RBP5.51□□□□□ -1.53
CYCSP28-201ENST00000534284 CPP00450 1065 aa5.51□□□□□ -1.53
CYCSP28-201ENST00000534284 TPM3P06753 285 aa5.51□□□□□ -1.53
CYCSP28-201ENST00000534284 ZKSCAN1P17029 563 aaPredicted RBP5.51□□□□□ -1.53
CYCSP28-201ENST00000534284 PDCP20941 246 aa5.51□□□□□ -1.53
CYCSP28-201ENST00000534284 CYP7A1P22680 504 aa5.51□□□□□ -1.53
CYCSP28-201ENST00000534284 PSMA5P28066 241 aa5.51□□□□□ -1.53
CYCSP28-201ENST00000534284 AMPD2Q01433 879 aa5.51□□□□□ -1.53
CYCSP28-201ENST00000534284 ITKQ08881 620 aa5.51□□□□□ -1.53
CYCSP28-201ENST00000534284 TEFQ10587 303 aa5.51□□□□□ -1.53
CYCSP28-201ENST00000534284 ZNF460Q14592 562 aa5.51□□□□□ -1.53
CYCSP28-201ENST00000534284 SART3Q15020 963 aaKnown RBP5.51□□□□□ -1.53
CYCSP28-201ENST00000534284 ANKRD1Q15327 319 aa5.51□□□□□ -1.53
CYCSP28-201ENST00000534284 TTF1Q15361 905 aaPredicted RBP5.51□□□□□ -1.53
CYCSP28-201ENST00000534284 PCBP1Q15365 356 aaKnown RBP eCLIP5.51□□□□□ -1.53
CYCSP28-201ENST00000534284 SF1Q15637 639 aaKnown RBP5.51□□□□□ -1.53
CYCSP28-201ENST00000534284 KRT24Q2M2I5 525 aa5.51□□□□□ -1.53
CYCSP28-201ENST00000534284 DPY19L1Q2PZI1 675 aa5.51□□□□□ -1.53
CYCSP28-201ENST00000534284 TRIM61Q5EBN2 209 aa5.51□□□□□ -1.53
CYCSP28-201ENST00000534284 PRRT3Q5FWE3 981 aa5.51□□□□□ -1.53
CYCSP28-201ENST00000534284 C1orf141Q5JVX7 400 aa5.51□□□□□ -1.53
CYCSP28-201ENST00000534284 CAVIN1Q6NZI2 390 aaKnown RBP5.51□□□□□ -1.53
CYCSP28-201ENST00000534284 PKN3Q6P5Z2 889 aa5.51□□□□□ -1.53
CYCSP28-201ENST00000534284 ILDR2Q71H61 639 aa5.51□□□□□ -1.53
CYCSP28-201ENST00000534284 G2E3Q7L622 706 aa5.51□□□□□ -1.53
CYCSP28-201ENST00000534284 FGD2Q7Z6J4 655 aa5.51□□□□□ -1.53
CYCSP28-201ENST00000534284 GAS2L3Q86XJ1 694 aa5.51□□□□□ -1.53
CYCSP28-201ENST00000534284 CCAR1Q8IX12 1150 aaKnown RBP5.51□□□□□ -1.53
CYCSP28-201ENST00000534284 CLASRPQ8N2M8 674 aaKnown RBP5.51□□□□□ -1.53
CYCSP28-201ENST00000534284 DNAJB8Q8NHS0 232 aa5.51□□□□□ -1.53
CYCSP28-201ENST00000534284 OTUD7AQ8TE49 926 aaPredicted RBP5.51□□□□□ -1.53
CYCSP28-201ENST00000534284 RNF141Q8WVD5 230 aa5.51□□□□□ -1.53
CYCSP28-201ENST00000534284 DNAAF4Q8WXU2 420 aa5.51□□□□□ -1.53
CYCSP28-201ENST00000534284 USP7Q93009 1102 aa5.51□□□□□ -1.53
CYCSP28-201ENST00000534284 USP44Q9H0E7 712 aa5.51□□□□□ -1.53
CYCSP28-201ENST00000534284 GSX1Q9H4S2 264 aaPredicted RBP5.51□□□□□ -1.53
CYCSP28-201ENST00000534284 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.51□□□□□ -1.53
CYCSP28-201ENST00000534284 TRIM39Q9HCM9 518 aa5.51□□□□□ -1.53
CYCSP28-201ENST00000534284 HYPKQ9NX55 129 aa5.51□□□□□ -1.53
CYCSP28-201ENST00000534284 GFOD1Q9NXC2 390 aa5.51□□□□□ -1.53
CYCSP28-201ENST00000534284 DBF4Q9UBU7 674 aaPredicted RBP5.51□□□□□ -1.53
CYCSP28-201ENST00000534284 USP21Q9UK80 565 aa5.51□□□□□ -1.53
CYCSP28-201ENST00000534284 NOL7Q9UMY1 257 aaKnown RBP5.51□□□□□ -1.53
CYCSP28-201ENST00000534284 LIMCH1Q9UPQ0 1083 aa5.51□□□□□ -1.53
CYCSP28-201ENST00000534284 EXOC6BQ9Y2D4 811 aa5.51□□□□□ -1.53
CYCSP28-201ENST00000534284 GPR55Q9Y2T6 319 aaPredicted RBP5.51□□□□□ -1.53
CYCSP28-201ENST00000534284 THRAP3Q9Y2W1 955 aaKnown RBP5.51□□□□□ -1.53
CYCSP28-201ENST00000534284 LRRFIP2Q9Y608 721 aaKnown RBP5.51□□□□□ -1.53
CYCSP28-201ENST00000534284 FHOD1Q9Y613 1164 aa5.51□□□□□ -1.53
CYCSP28-201ENST00000534284 NFAT5O94916 1531 aa5.51□□□□□ -1.53
CYCSP28-201ENST00000534284 KDM3BQ7LBC6 1761 aa5.51□□□□□ -1.53
CYCSP28-201ENST00000534284 CRYBG1Q9Y4K1 1723 aa5.51□□□□□ -1.53
CYCSP28-201ENST00000534284 ZNF142P52746 1687 aaPredicted RBP5.5□□□□□ -1.53
CYCSP28-201ENST00000534284 B4E1Z4 1266 aa5.5□□□□□ -1.53
CYCSP28-201ENST00000534284 PIK3R2O00459 728 aa5.5□□□□□ -1.53
CYCSP28-201ENST00000534284 MEIS1O00470 390 aa5.5□□□□□ -1.53
CYCSP28-201ENST00000534284 PRC1O43663 620 aa5.5□□□□□ -1.53
CYCSP28-201ENST00000534284 BRINP1O60477 761 aa5.5□□□□□ -1.53
CYCSP28-201ENST00000534284 OFD1O75665 1012 aa5.5□□□□□ -1.53
CYCSP28-201ENST00000534284 SURF6O75683 361 aaKnown RBP5.5□□□□□ -1.53
CYCSP28-201ENST00000534284 SLITRK5O94991 958 aa5.5□□□□□ -1.53
CYCSP28-201ENST00000534284 MAP4K4O95819 1239 aaPredicted RBP5.5□□□□□ -1.53
CYCSP28-201ENST00000534284 C6orf222P0C671 652 aaPredicted RBP5.5□□□□□ -1.53
CYCSP28-201ENST00000534284 ELNP15502 786 aa5.5□□□□□ -1.53
CYCSP28-201ENST00000534284 GLB1P16278 677 aa5.5□□□□□ -1.53
CYCSP28-201ENST00000534284 HOXB4P17483 251 aaPredicted RBP5.5□□□□□ -1.53
CYCSP28-201ENST00000534284 ITIH2P19823 946 aa5.5□□□□□ -1.53
CYCSP28-201ENST00000534284 RXRBP28702 533 aa5.5□□□□□ -1.53
CYCSP28-201ENST00000534284 EPHB1P54762 984 aa5.5□□□□□ -1.53
CYCSP28-201ENST00000534284 GFRA1P56159 465 aa5.5□□□□□ -1.53
CYCSP28-201ENST00000534284 EIF4A1P60842 406 aaKnown RBP5.5□□□□□ -1.53
CYCSP28-201ENST00000534284 MAP4K2Q12851 820 aa5.5□□□□□ -1.53
CYCSP28-201ENST00000534284 PPP2R5AQ15172 486 aa5.5□□□□□ -1.53
CYCSP28-201ENST00000534284 RNF219Q5W0B1 726 aaPredicted RBP5.5□□□□□ -1.53
CYCSP28-201ENST00000534284 CWF19L1Q69YN2 538 aaKnown RBP5.5□□□□□ -1.53
CYCSP28-201ENST00000534284 ANKLE2Q86XL3 938 aa5.5□□□□□ -1.53
CYCSP28-201ENST00000534284 IL17REQ8NFR9 667 aa5.5□□□□□ -1.53
CYCSP28-201ENST00000534284 SYTL5Q8TDW5 730 aaPredicted RBP5.5□□□□□ -1.53
CYCSP28-201ENST00000534284 RILPL2Q969X0 211 aa5.5□□□□□ -1.53
CYCSP28-201ENST00000534284 FBXL18Q96ME1 805 aa5.5□□□□□ -1.53
CYCSP28-201ENST00000534284 TTC1Q99614 292 aa5.5□□□□□ -1.53
CYCSP28-201ENST00000534284 CEP41Q9BYV8 373 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms