RNA–Protein interactions for RNA: ENST00000509784.1

CALCOCO2-216, Transcript of calcium binding and coiled-coil domain 2, human

TSL 4

Gene CALCOCO2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-216	ENST00000509784	SMOC1	Q9H4F8	434 aa		4.24	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	PCIF1	Q9H4Z3	704 aa		4.24	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	VTA1	Q9NP79	307 aa		4.24	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	TOMM22	Q9NS69	142 aa		4.24	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	MYOT	Q9UBF9	498 aa		4.24	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	DBR1	Q9UK59	544 aa	Known RBP	4.24	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	TRHDE	Q9UKU6	1024 aa		4.24	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	PALD1	Q9ULE6	856 aa		4.24	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	THRAP3	Q9Y2W1	955 aa	Known RBP	4.24	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	TELO2	Q9Y4R8	837 aa		4.24	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	NUB1	Q9Y5A7	615 aa		4.24	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	PCDHB4	Q9Y5E5	795 aa		4.24	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	EIF4G1	Q04637	1599 aa	Known RBP	4.23	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	4.23	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	FAM90A27P	A6NNH2	459 aa		4.23	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	NUDT19	A8MXV4	375 aa		4.23	□□□□□ -1.73
CALCOCO2-216	ENST00000509784		F8W031	263 aa	Predicted RBP	4.23	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	TGM5	O43548	720 aa		4.23	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	HYAL3	O43820	417 aa	Predicted RBP	4.23	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	CLASP2	O75122	1294 aa	Known RBP	4.23	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	ULK1	O75385	1050 aa		4.23	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	TADA3	O75528	432 aa		4.23	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	CYBB	P04839	570 aa		4.23	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	DBH	P09172	617 aa		4.23	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	TTF1	Q15361	905 aa	Predicted RBP	4.23	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	SEC23A	Q15436	765 aa		4.23	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	BTBD8	Q5XKL5	378 aa		4.23	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	CYP4F22	Q6NT55	531 aa		4.23	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	PAQR3	Q6TCH7	311 aa		4.23	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	4.23	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	ABI1	Q8IZP0	508 aa		4.23	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	NETO2	Q8NC67	525 aa		4.23	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	CLRN3	Q8NCR9	226 aa		4.23	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	CLEC4D	Q8WXI8	215 aa		4.23	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	AHCYL2	Q96HN2	611 aa	Known RBP	4.23	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	ELF4	Q99607	663 aa	Predicted RBP	4.23	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	YIPF4	Q9BSR8	244 aa		4.23	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	TNFRSF12A	Q9NP84	129 aa		4.23	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	RIC8B	Q9NVN3	520 aa		4.23	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	ASH2L	Q9UBL3	628 aa		4.23	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	NUDT5	Q9UKK9	219 aa		4.23	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	SPO11	Q9Y5K1	396 aa		4.23	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	B3GALT1	Q9Y5Z6	326 aa		4.23	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	EID1	Q9Y6B2	187 aa		4.23	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	PRAMEF25	A6NGN4	478 aa		4.22	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	SRGAP3	O43295	1099 aa		4.22	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	BUB1B	O60566	1050 aa	Predicted RBP	4.22	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	MPO	P05164	745 aa		4.22	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	PTPN1	P18031	435 aa	Known RBP	4.22	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	PTX3	P26022	381 aa	Predicted RBP	4.22	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	AFM	P43652	599 aa		4.22	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	EPHA5	P54756	1037 aa		4.22	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	SESN3	P58005	492 aa		4.22	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	LRP8	Q14114	963 aa		4.22	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	RAB3GAP1	Q15042	981 aa		4.22	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	ADGRF1	Q5T601	910 aa		4.22	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	SYDE2	Q5VT97	1194 aa		4.22	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	FYB2	Q5VWT5	728 aa		4.22	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	FMNL3	Q8IVF7	1028 aa		4.22	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	TRIM48	Q8IWZ4	208 aa		4.22	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	ARRDC4	Q8NCT1	418 aa		4.22	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	PHOSPHO1	Q8TCT1	267 aa		4.22	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	DLG3	Q92796	817 aa		4.22	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	PEX11G	Q96HA9	241 aa		4.22	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	KIRREL1	Q96J84	757 aa		4.22	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	SCYL1	Q96KG9	808 aa		4.22	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	MS4A5	Q9H3V2	200 aa		4.22	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	KCNH7	Q9NS40	1196 aa		4.22	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	CHPF2	Q9P2E5	772 aa		4.22	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	TCEAL9	Q9UHQ7	104 aa		4.22	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	ZNF652	Q9Y2D9	606 aa		4.22	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	YBX2	Q9Y2T7	364 aa	Known RBP	4.22	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	HCFC2	Q9Y5Z7	792 aa		4.22	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	RSF1	Q96T23	1441 aa	Predicted RBP	4.21	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	SCO2	A0A1W2PP80	73 aa		4.21	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	TCRBV5S2	A0A599	114 aa		4.21	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	LCHN	A4D1U4	455 aa		4.21	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	GABRD	O14764	452 aa		4.21	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	C4BPA	P04003	597 aa	Known RBP	4.21	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	LSP1	P33241	339 aa		4.21	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	GJA4	P35212	333 aa		4.21	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	PDE6B	P35913	854 aa		4.21	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	NEK2	P51955	445 aa		4.21	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	GP2	P55259	537 aa	Known RBP	4.21	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	ERVFRD-1	P60508	538 aa		4.21	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	SMAD3	P84022	425 aa	Known RBP	4.21	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	PRR5	P85299	388 aa		4.21	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	FAP	Q12884	760 aa		4.21	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	TERF2	Q15554	542 aa		4.21	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	SMAD2	Q15796	467 aa	Known RBP	4.21	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	ABCB5	Q2M3G0	1257 aa		4.21	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	RPTN	Q6XPR3	784 aa		4.21	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	RASSF3	Q86WH2	238 aa		4.21	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	FLAD1	Q8NFF5	587 aa		4.21	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	BCAS3	Q9H6U6	928 aa		4.21	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	ACSS2	Q9NR19	701 aa		4.21	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	AASDHPPT	Q9NRN7	309 aa		4.21	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	C14orf119	Q9NWQ9	140 aa		4.21	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	NOC2L	Q9Y3T9	749 aa	Known RBP	4.21	□□□□□ -1.74
CALCOCO2-216	ENST00000509784	SCRIB	Q14160	1630 aa		4.21	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms