RNA–Protein interactions for RNA: ENST00000498607.2

SCG5-209, Transcript of secretogranin V, humanhuman

TSL 2

Gene SCG5, Length 853 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG5-209ENST00000498607 SCFD2Q8WU76 684 aa13.11□□□□□ -0.31
SCG5-209ENST00000498607 SYAP1Q96A49 352 aaPredicted RBP13.11□□□□□ -0.31
SCG5-209ENST00000498607 ERO1AQ96HE7 468 aa13.11□□□□□ -0.31
SCG5-209ENST00000498607 SDF4Q9BRK5 362 aa13.11□□□□□ -0.31
SCG5-209ENST00000498607 PYM1Q9BRP8 204 aaKnown RBP13.11□□□□□ -0.31
SCG5-209ENST00000498607 BEGAINQ9BUH8 593 aa13.11□□□□□ -0.31
SCG5-209ENST00000498607 KATNBL1Q9H079 304 aa13.11□□□□□ -0.31
SCG5-209ENST00000498607 UNC45AQ9H3U1 944 aa13.11□□□□□ -0.31
SCG5-209ENST00000498607 DACT1Q9NYF0 836 aa13.11□□□□□ -0.31
SCG5-209ENST00000498607 USP25Q9UHP3 1055 aa13.11□□□□□ -0.31
SCG5-209ENST00000498607 WDR81Q562E7 1941 aa13.11□□□□□ -0.31
SCG5-209ENST00000498607 KDM3AQ9Y4C1 1321 aa13.11□□□□□ -0.31
SCG5-209ENST00000498607 RBM47A0AV96 593 aaKnown RBP13.1□□□□□ -0.31
SCG5-209ENST00000498607 DDX39AO00148 427 aaKnown RBP13.1□□□□□ -0.31
SCG5-209ENST00000498607 ZNF202O95125 648 aa13.1□□□□□ -0.31
SCG5-209ENST00000498607 GNRH1P01148 92 aa13.1□□□□□ -0.31
SCG5-209ENST00000498607 IGHA2P01877 340 aa13.1□□□□□ -0.31
SCG5-209ENST00000498607 CYP2B6P20813 491 aa13.1□□□□□ -0.31
SCG5-209ENST00000498607 UBA1P22314 1058 aaKnown RBP13.1□□□□□ -0.31
SCG5-209ENST00000498607 HOXD10P28358 340 aa13.1□□□□□ -0.31
SCG5-209ENST00000498607 CDC25AP30304 524 aa13.1□□□□□ -0.31
SCG5-209ENST00000498607 FLT3LGP49771 235 aa13.1□□□□□ -0.31
SCG5-209ENST00000498607 TTLL4Q14679 1199 aa13.1□□□□□ -0.31
SCG5-209ENST00000498607 ARHGEF6Q15052 776 aa13.1□□□□□ -0.31
SCG5-209ENST00000498607 PPP1R15BQ5SWA1 713 aa13.1□□□□□ -0.31
SCG5-209ENST00000498607 KRT79Q5XKE5 535 aa13.1□□□□□ -0.31
SCG5-209ENST00000498607 HAUS3Q68CZ6 603 aa13.1□□□□□ -0.31
SCG5-209ENST00000498607 NCAPH2Q6IBW4 605 aa13.1□□□□□ -0.31
SCG5-209ENST00000498607 ZNF746Q6NUN9 644 aaPredicted RBP13.1□□□□□ -0.31
SCG5-209ENST00000498607 CCDC62Q6P9F0 684 aa13.1□□□□□ -0.31
SCG5-209ENST00000498607 RDM1Q8NG50 284 aa13.1□□□□□ -0.31
SCG5-209ENST00000498607 SNX29Q8TEQ0 813 aa13.1□□□□□ -0.31
SCG5-209ENST00000498607 CALML4Q96GE6 196 aa13.1□□□□□ -0.31
SCG5-209ENST00000498607 MMTAG2Q9BU76 263 aaKnown RBP13.1□□□□□ -0.31
SCG5-209ENST00000498607 ABHD16BQ9H3Z7 469 aa13.1□□□□□ -0.31
SCG5-209ENST00000498607 FLRT1Q9NZU1 646 aa13.1□□□□□ -0.31
SCG5-209ENST00000498607 CCDC39Q9UFE4 941 aa13.1□□□□□ -0.31
SCG5-209ENST00000498607 A0A087X0B3 334 aa13.09□□□□□ -0.31
SCG5-209ENST00000498607 EML1O00423 815 aa13.09□□□□□ -0.31
SCG5-209ENST00000498607 POLR2DO15514 142 aaKnown RBP13.09□□□□□ -0.31
SCG5-209ENST00000498607 CHMP2AO43633 222 aa13.09□□□□□ -0.31
SCG5-209ENST00000498607 SFNP31947 248 aa13.09□□□□□ -0.31
SCG5-209ENST00000498607 CCT6AP40227 531 aaKnown RBP13.09□□□□□ -0.31
SCG5-209ENST00000498607 JAK3P52333 1124 aa13.09□□□□□ -0.31
SCG5-209ENST00000498607 ATN1P54259 1190 aaPredicted RBP13.09□□□□□ -0.31
SCG5-209ENST00000498607 CAP1Q01518 475 aa13.09□□□□□ -0.31
SCG5-209ENST00000498607 SP2Q02086 613 aa13.09□□□□□ -0.31
SCG5-209ENST00000498607 PRKCZQ05513 592 aa13.09□□□□□ -0.31
SCG5-209ENST00000498607 NEDD9Q14511 834 aa13.09□□□□□ -0.31
SCG5-209ENST00000498607 KARSQ15046 597 aaKnown RBP13.09□□□□□ -0.31
SCG5-209ENST00000498607 EPHA7Q15375 998 aa13.09□□□□□ -0.31
SCG5-209ENST00000498607 CCL14Q16627 93 aa13.09□□□□□ -0.31
SCG5-209ENST00000498607 TMEM119Q4V9L6 283 aa13.09□□□□□ -0.31
SCG5-209ENST00000498607 HYIQ5T013 277 aa13.09□□□□□ -0.31
SCG5-209ENST00000498607 IER5LQ5T953 404 aa13.09□□□□□ -0.31
SCG5-209ENST00000498607 ASTLQ6HA08 431 aaPredicted RBP13.09□□□□□ -0.31
SCG5-209ENST00000498607 TAPT1Q6NXT6 567 aa13.09□□□□□ -0.31
SCG5-209ENST00000498607 CAVIN1Q6NZI2 390 aaKnown RBP13.09□□□□□ -0.31
SCG5-209ENST00000498607 MIER3Q7Z3K6 550 aa13.09□□□□□ -0.31
SCG5-209ENST00000498607 TRMT44Q8IYL2 757 aaKnown RBP13.09□□□□□ -0.31
SCG5-209ENST00000498607 DNAJC5GQ8N7S2 189 aa13.09□□□□□ -0.31
SCG5-209ENST00000498607 PDILTQ8N807 584 aa13.09□□□□□ -0.31
SCG5-209ENST00000498607 RASSF8Q8NHQ8 419 aa13.09□□□□□ -0.31
SCG5-209ENST00000498607 NEK9Q8TD19 979 aa13.09□□□□□ -0.31
SCG5-209ENST00000498607 ZNF296Q8WUU4 475 aaPredicted RBP13.09□□□□□ -0.31
SCG5-209ENST00000498607 CDK5RAP3Q96JB5 506 aa13.09□□□□□ -0.31
SCG5-209ENST00000498607 TIGD1Q96MW7 591 aa13.09□□□□□ -0.31
SCG5-209ENST00000498607 CLSTN2Q9H4D0 955 aa13.09□□□□□ -0.31
SCG5-209ENST00000498607 JPH1Q9HDC5 661 aaPredicted RBP13.09□□□□□ -0.31
SCG5-209ENST00000498607 DISC1Q9NRI5 854 aa13.09□□□□□ -0.31
SCG5-209ENST00000498607 WBP1LQ9NX94 342 aa13.09□□□□□ -0.31
SCG5-209ENST00000498607 SLC9A2Q9UBY0 812 aa13.09□□□□□ -0.31
SCG5-209ENST00000498607 SRRDQ9UH36 339 aa13.09□□□□□ -0.31
SCG5-209ENST00000498607 DDX41Q9UJV9 622 aaKnown RBP13.09□□□□□ -0.31
SCG5-209ENST00000498607 GABRQQ9UN88 632 aa13.09□□□□□ -0.31
SCG5-209ENST00000498607 LOXHD1Q8IVV2 1947 aa13.09□□□□□ -0.31
SCG5-209ENST00000498607 WDR64B1ANS9 1081 aa13.08□□□□□ -0.32
SCG5-209ENST00000498607 ATMINO43313 823 aaPredicted RBP13.08□□□□□ -0.32
SCG5-209ENST00000498607 ACTN4O43707 911 aaKnown RBP13.08□□□□□ -0.32
SCG5-209ENST00000498607 ARIH2O95376 493 aa13.08□□□□□ -0.32
SCG5-209ENST00000498607 CCNE2O96020 404 aa13.08□□□□□ -0.32
SCG5-209ENST00000498607 PLCG1P19174 1290 aa13.08□□□□□ -0.32
SCG5-209ENST00000498607 RPA1P27694 616 aa13.08□□□□□ -0.32
SCG5-209ENST00000498607 IRX5P78411 483 aaPredicted RBP13.08□□□□□ -0.32
SCG5-209ENST00000498607 GRB10Q13322 594 aa13.08□□□□□ -0.32
SCG5-209ENST00000498607 ACVR2BQ13705 512 aa13.08□□□□□ -0.32
SCG5-209ENST00000498607 CCDC183Q5T5S1 534 aa13.08□□□□□ -0.32
SCG5-209ENST00000498607 RRAGBQ5VZM2 374 aa13.08□□□□□ -0.32
SCG5-209ENST00000498607 KRBA2Q6ZNG9 492 aa13.08□□□□□ -0.32
SCG5-209ENST00000498607 SMAP1Q8IYB5 467 aaPredicted RBP13.08□□□□□ -0.32
SCG5-209ENST00000498607 IQUBQ8NA54 791 aa13.08□□□□□ -0.32
SCG5-209ENST00000498607 DHX58Q96C10 678 aa13.08□□□□□ -0.32
SCG5-209ENST00000498607 EIF2AK1Q9BQI3 630 aaKnown RBP13.08□□□□□ -0.32
SCG5-209ENST00000498607 POLR3CQ9BUI4 534 aaPredicted RBP13.08□□□□□ -0.32
SCG5-209ENST00000498607 NT5C3AQ9H0P0 336 aa13.08□□□□□ -0.32
SCG5-209ENST00000498607 NUP62CLQ9H1M0 184 aa13.08□□□□□ -0.32
SCG5-209ENST00000498607 CUEDC2Q9H467 287 aa13.08□□□□□ -0.32
SCG5-209ENST00000498607 TUFT1Q9NNX1 390 aa13.08□□□□□ -0.32
SCG5-209ENST00000498607 PDGFCQ9NRA1 345 aa13.08□□□□□ -0.32
SCG5-209ENST00000498607 TMEM63CQ9P1W3 806 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms