RNA–Protein interactions for RNA: ENST00000497179.1

USP11-212, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 900 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-212ENST00000497179 SMAP1Q8IYB5 467 aaPredicted RBP16.32■□□□□ 0.2
USP11-212ENST00000497179 SEPT1Q8WYJ6 367 aa16.32■□□□□ 0.2
USP11-212ENST00000497179 MTG1Q9BT17 334 aaPredicted RBP16.32■□□□□ 0.2
USP11-212ENST00000497179 UNC45AQ9H3U1 944 aa16.32■□□□□ 0.2
USP11-212ENST00000497179 MYH15Q9Y2K3 1946 aa16.32■□□□□ 0.2
USP11-212ENST00000497179 ZDHHC9Q9Y397 364 aa16.32■□□□□ 0.2
USP11-212ENST00000497179 EMSYQ7Z589 1322 aa16.31■□□□□ 0.2
USP11-212ENST00000497179 LAD1O00515 517 aa16.31■□□□□ 0.2
USP11-212ENST00000497179 MARCH6O60337 910 aa16.31■□□□□ 0.2
USP11-212ENST00000497179 ATG7O95352 703 aa16.31■□□□□ 0.2
USP11-212ENST00000497179 F2P00734 622 aa16.31■□□□□ 0.2
USP11-212ENST00000497179 LGALS2P05162 132 aa16.31■□□□□ 0.2
USP11-212ENST00000497179 TCF7P36402 384 aaPredicted RBP16.31■□□□□ 0.2
USP11-212ENST00000497179 PTGDRQ13258 359 aa16.31■□□□□ 0.2
USP11-212ENST00000497179 PPP2R5CQ13362 524 aa16.31■□□□□ 0.2
USP11-212ENST00000497179 FOXD4L5Q5VV16 416 aaPredicted RBP16.31■□□□□ 0.2
USP11-212ENST00000497179 FAM173BQ6P4H8 233 aa16.31■□□□□ 0.2
USP11-212ENST00000497179 CXCL17Q6UXB2 119 aa16.31■□□□□ 0.2
USP11-212ENST00000497179 ABHD15Q6UXT9 468 aa16.31■□□□□ 0.2
USP11-212ENST00000497179 NECAB2Q7Z6G3 386 aa16.31■□□□□ 0.2
USP11-212ENST00000497179 RDM1Q8NG50 284 aa16.31■□□□□ 0.2
USP11-212ENST00000497179 FOXD4L4Q8WXT5 416 aaPredicted RBP16.31■□□□□ 0.2
USP11-212ENST00000497179 PAWRQ96IZ0 340 aaKnown RBP16.31■□□□□ 0.2
USP11-212ENST00000497179 C11orf49Q9H6J7 331 aa16.31■□□□□ 0.2
USP11-212ENST00000497179 IGKV6D-21A0A0A0MT36 114 aa16.3■□□□□ 0.2
USP11-212ENST00000497179 WDR64B1ANS9 1081 aa16.3■□□□□ 0.2
USP11-212ENST00000497179 LGR5O75473 907 aa16.3■□□□□ 0.2
USP11-212ENST00000497179 BMP15O95972 392 aa16.3■□□□□ 0.2
USP11-212ENST00000497179 SUPT20HL2P0C7V6 817 aa16.3■□□□□ 0.2
USP11-212ENST00000497179 ZNF286BP0CG31 522 aa16.3■□□□□ 0.2
USP11-212ENST00000497179 SFNP31947 248 aa16.3■□□□□ 0.2
USP11-212ENST00000497179 JAK3P52333 1124 aa16.3■□□□□ 0.2
USP11-212ENST00000497179 ATP2C1P98194 919 aaPredicted RBP16.3■□□□□ 0.2
USP11-212ENST00000497179 SPIRE1Q08AE8 756 aa16.3■□□□□ 0.2
USP11-212ENST00000497179 KAT2BQ92831 832 aa16.3■□□□□ 0.2
USP11-212ENST00000497179 GLT1D1Q96MS3 346 aa16.3■□□□□ 0.2
USP11-212ENST00000497179 C16orf70Q9BSU1 422 aa16.3■□□□□ 0.2
USP11-212ENST00000497179 CHMP2AO43633 222 aa16.29■□□□□ 0.2
USP11-212ENST00000497179 PRPHP41219 470 aa16.29■□□□□ 0.2
USP11-212ENST00000497179 TXKP42681 527 aa16.29■□□□□ 0.2
USP11-212ENST00000497179 NUCB2P80303 420 aa16.29■□□□□ 0.2
USP11-212ENST00000497179 UTP14CQ5TAP6 766 aaKnown RBP16.29■□□□□ 0.2
USP11-212ENST00000497179 MIS18BP1Q6P0N0 1132 aa16.29■□□□□ 0.2
USP11-212ENST00000497179 FERMT2Q96AC1 680 aa16.29■□□□□ 0.2
USP11-212ENST00000497179 PCYT2Q99447 389 aa16.29■□□□□ 0.2
USP11-212ENST00000497179 SENP6Q9GZR1 1112 aaPredicted RBP16.29■□□□□ 0.2
USP11-212ENST00000497179 TTC12Q9H892 705 aaPredicted RBP16.29■□□□□ 0.2
USP11-212ENST00000497179 STARD7Q9NQZ5 370 aa16.29■□□□□ 0.2
USP11-212ENST00000497179 DISC1Q9NRI5 854 aa16.29■□□□□ 0.2
USP11-212ENST00000497179 PCDHA12Q9UN75 941 aa16.29■□□□□ 0.2
USP11-212ENST00000497179 CEP131Q9UPN4 1083 aa16.29■□□□□ 0.2
USP11-212ENST00000497179 PCDHA10Q9Y5I2 948 aa16.29■□□□□ 0.2
USP11-212ENST00000497179 SCN10AQ9Y5Y9 1956 aa16.29■□□□□ 0.2
USP11-212ENST00000497179 HAS3O00219 553 aa16.28■□□□□ 0.2
USP11-212ENST00000497179 PSAPP07602 524 aa16.28■□□□□ 0.2
USP11-212ENST00000497179 SNX17Q15036 470 aa16.28■□□□□ 0.2
USP11-212ENST00000497179 SF3A1Q15459 793 aaKnown RBP16.28■□□□□ 0.2
USP11-212ENST00000497179 MIER3Q7Z3K6 550 aa16.28■□□□□ 0.2
USP11-212ENST00000497179 TRIM50Q86XT4 487 aa16.28■□□□□ 0.2
USP11-212ENST00000497179 CCDC60Q8IWA6 550 aaPredicted RBP16.28■□□□□ 0.2
USP11-212ENST00000497179 AFAP1L1Q8TED9 768 aa16.28■□□□□ 0.2
USP11-212ENST00000497179 ZNF396Q96N95 335 aaPredicted RBP16.28■□□□□ 0.2
USP11-212ENST00000497179 USP28Q96RU2 1077 aa16.28■□□□□ 0.2
USP11-212ENST00000497179 KATNAL1Q9BW62 490 aa16.28■□□□□ 0.2
USP11-212ENST00000497179 FTOQ9C0B1 505 aaKnown RBP eCLIP16.28■□□□□ 0.2
USP11-212ENST00000497179 SMARCAD1Q9H4L7 1026 aa16.28■□□□□ 0.2
USP11-212ENST00000497179 ZNF215Q9UL58 517 aaPredicted RBP16.28■□□□□ 0.2
USP11-212ENST00000497179 CIZ1Q9ULV3 898 aaPredicted RBP16.28■□□□□ 0.2
USP11-212ENST00000497179 CLIC4Q9Y696 253 aa16.28■□□□□ 0.2
USP11-212ENST00000497179 MKI67P46013 3256 aaKnown RBP16.27■□□□□ 0.2
USP11-212ENST00000497179 GRIN2DO15399 1336 aa16.27■□□□□ 0.2
USP11-212ENST00000497179 IGSF9BQ9UPX0 1349 aa16.27■□□□□ 0.2
USP11-212ENST00000497179 A0A0U1RQG5 324 aaPredicted RBP16.27■□□□□ 0.2
USP11-212ENST00000497179 H3BRB1 525 aa16.27■□□□□ 0.2
USP11-212ENST00000497179 EML1O00423 815 aa16.27■□□□□ 0.2
USP11-212ENST00000497179 PSEN2P49810 448 aa16.27■□□□□ 0.2
USP11-212ENST00000497179 FXR2P51116 673 aaKnown RBP eCLIP16.27■□□□□ 0.2
USP11-212ENST00000497179 PSMC6P62333 389 aa16.27■□□□□ 0.2
USP11-212ENST00000497179 MFSD10Q14728 455 aa16.27■□□□□ 0.2
USP11-212ENST00000497179 PTPAQ15257 358 aa16.27■□□□□ 0.2
USP11-212ENST00000497179 TMEM266Q2M3C6 531 aa16.27■□□□□ 0.2
USP11-212ENST00000497179 FAM160B1Q5W0V3 765 aa16.27■□□□□ 0.2
USP11-212ENST00000497179 ARL6IP4Q66PJ3 421 aaKnown RBP16.27■□□□□ 0.2
USP11-212ENST00000497179 NCAPH2Q6IBW4 605 aa16.27■□□□□ 0.2
USP11-212ENST00000497179 PLPPR4Q7Z2D5 763 aa16.27■□□□□ 0.2
USP11-212ENST00000497179 SLC43A3Q8NBI5 491 aa16.27■□□□□ 0.2
USP11-212ENST00000497179 SEZ6LQ9BYH1 1024 aa16.27■□□□□ 0.2
USP11-212ENST00000497179 TUT1Q9H6E5 874 aaKnown RBP16.27■□□□□ 0.2
USP11-212ENST00000497179 AZI2Q9H6S1 392 aa16.27■□□□□ 0.2
USP11-212ENST00000497179 SAMM50Q9Y512 469 aa16.27■□□□□ 0.2
USP11-212ENST00000497179 MORC2Q9Y6X9 1032 aaPredicted RBP16.27■□□□□ 0.2
USP11-212ENST00000497179 BACH1O14867 736 aa16.26■□□□□ 0.19
USP11-212ENST00000497179 NASPP49321 788 aaPredicted RBP16.26■□□□□ 0.19
USP11-212ENST00000497179 STAT5BP51692 787 aa16.26■□□□□ 0.19
USP11-212ENST00000497179 ITGA7Q13683 1181 aa16.26■□□□□ 0.19
USP11-212ENST00000497179 EPHA7Q15375 998 aa16.26■□□□□ 0.19
USP11-212ENST00000497179 KIAA0753Q2KHM9 967 aa16.26■□□□□ 0.19
USP11-212ENST00000497179 C1orf53Q5VUE5 145 aa16.26■□□□□ 0.19
USP11-212ENST00000497179 ATL3Q6DD88 541 aa16.26■□□□□ 0.19
USP11-212ENST00000497179 GLG1Q92896 1179 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms