RNA–Protein interactions for RNA: ENST00000496230.5

HCN3-204, Transcript of hyperpolarization activated cyclic nucleotide gated potassium channel 3, humanhuman

TSL 2

Gene HCN3, Length 3,245 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3-204ENST00000496230 KCNB1Q14721 858 aa13.23□□□□□ -0.29
HCN3-204ENST00000496230 MIIPQ5JXC2 388 aa13.23□□□□□ -0.29
HCN3-204ENST00000496230 WDR78Q5VTH9 848 aa13.23□□□□□ -0.29
HCN3-204ENST00000496230 GJB7Q6PEY0 223 aa13.23□□□□□ -0.29
HCN3-204ENST00000496230 LENG9Q96B70 501 aa13.23□□□□□ -0.29
HCN3-204ENST00000496230 ZNHIT6Q9NWK9 470 aaKnown RBP13.23□□□□□ -0.29
HCN3-204ENST00000496230 HERC5Q9UII4 1024 aaKnown RBP13.23□□□□□ -0.29
HCN3-204ENST00000496230 AKR1B10O60218 316 aa13.22□□□□□ -0.29
HCN3-204ENST00000496230 RAPGEF1Q13905 1077 aa13.22□□□□□ -0.29
HCN3-204ENST00000496230 WDR59Q6PJI9 974 aa13.22□□□□□ -0.29
HCN3-204ENST00000496230 CYP26C1Q6V0L0 522 aa13.22□□□□□ -0.29
HCN3-204ENST00000496230 MOB2Q70IA6 237 aa13.22□□□□□ -0.29
HCN3-204ENST00000496230 CCDC65Q8IXS2 484 aa13.22□□□□□ -0.29
HCN3-204ENST00000496230 TRPM4Q8TD43 1214 aa13.22□□□□□ -0.29
HCN3-204ENST00000496230 ATG4CQ96DT6 458 aa13.22□□□□□ -0.29
HCN3-204ENST00000496230 TAAR1Q96RJ0 339 aa13.22□□□□□ -0.29
HCN3-204ENST00000496230 RABGAP1Q9Y3P9 1069 aa13.22□□□□□ -0.29
HCN3-204ENST00000496230 ZNF185O15231 689 aa13.22□□□□□ -0.29
HCN3-204ENST00000496230 NDUFA10O95299 355 aa13.22□□□□□ -0.29
HCN3-204ENST00000496230 CHURC1Q8WUH1 139 aa13.22□□□□□ -0.29
HCN3-204ENST00000496230 SCFD1Q8WVM8 642 aa13.22□□□□□ -0.29
HCN3-204ENST00000496230 GMCL1Q96IK5 515 aa13.22□□□□□ -0.29
HCN3-204ENST00000496230 CCDC42Q96M95 316 aa13.22□□□□□ -0.29
HCN3-204ENST00000496230 NHEJ1Q9H9Q4 299 aaPredicted RBP13.22□□□□□ -0.29
HCN3-204ENST00000496230 LRRC53A6NM62 1247 aa13.22□□□□□ -0.29
HCN3-204ENST00000496230 TMCO5BA8MYB1 307 aa13.22□□□□□ -0.29
HCN3-204ENST00000496230 TBCAO75347 108 aaKnown RBP13.22□□□□□ -0.29
HCN3-204ENST00000496230 PPP2R3AQ06190 1150 aa13.22□□□□□ -0.29
HCN3-204ENST00000496230 MKRN3Q13064 507 aaKnown RBP13.22□□□□□ -0.29
HCN3-204ENST00000496230 ETNPPLQ8TBG4 499 aa13.22□□□□□ -0.29
HCN3-204ENST00000496230 MTMR8Q96EF0 704 aa13.22□□□□□ -0.29
HCN3-204ENST00000496230 CCDC43Q96MW1 224 aaKnown RBP13.22□□□□□ -0.29
HCN3-204ENST00000496230 TSG101Q99816 390 aa13.22□□□□□ -0.29
HCN3-204ENST00000496230 GOLPH3Q9H4A6 298 aa13.22□□□□□ -0.29
HCN3-204ENST00000496230 RPAP3Q9H6T3 665 aaPredicted RBP13.22□□□□□ -0.29
HCN3-204ENST00000496230 GPRC5CQ9NQ84 441 aa13.22□□□□□ -0.29
HCN3-204ENST00000496230 JADE2Q9NQC1 790 aa13.22□□□□□ -0.29
HCN3-204ENST00000496230 ASNSP08243 561 aa13.21□□□□□ -0.29
HCN3-204ENST00000496230 DNM2P50570 870 aa13.21□□□□□ -0.29
HCN3-204ENST00000496230 TERF1P54274 439 aa13.21□□□□□ -0.29
HCN3-204ENST00000496230 GFPT1Q06210 699 aaPredicted RBP13.21□□□□□ -0.29
HCN3-204ENST00000496230 PANX2Q96RD6 677 aa13.21□□□□□ -0.29
HCN3-204ENST00000496230 KIFC3Q9BVG8 833 aa13.21□□□□□ -0.29
HCN3-204ENST00000496230 MLXIPQ9HAP2 919 aa13.21□□□□□ -0.29
HCN3-204ENST00000496230 STK17AQ9UEE5 414 aa13.21□□□□□ -0.29
HCN3-204ENST00000496230 PLIN4Q96Q06 1357 aa13.21□□□□□ -0.29
HCN3-204ENST00000496230 IPO5O00410 1097 aaKnown RBP13.21□□□□□ -0.29
HCN3-204ENST00000496230 USO1O60763 962 aaKnown RBP13.21□□□□□ -0.29
HCN3-204ENST00000496230 LRRN2O75325 713 aa13.21□□□□□ -0.29
HCN3-204ENST00000496230 DDNO94850 711 aaPredicted RBP13.21□□□□□ -0.29
HCN3-204ENST00000496230 IPO7O95373 1038 aaKnown RBP13.21□□□□□ -0.29
HCN3-204ENST00000496230 NPEPPSP55786 919 aa13.21□□□□□ -0.29
HCN3-204ENST00000496230 VWA3BQ502W6 1294 aa13.21□□□□□ -0.29
HCN3-204ENST00000496230 PPP1R18Q6NYC8 613 aa13.21□□□□□ -0.29
HCN3-204ENST00000496230 GMCL1P1Q8NEA9 526 aa13.21□□□□□ -0.29
HCN3-204ENST00000496230 LSM14BQ9BX40 385 aaKnown RBP13.21□□□□□ -0.29
HCN3-204ENST00000496230 THAP9Q9H5L6 903 aa13.21□□□□□ -0.29
HCN3-204ENST00000496230 KCNMB3Q9NPA1 279 aa13.21□□□□□ -0.29
HCN3-204ENST00000496230 EHD2Q9NZN4 543 aa13.21□□□□□ -0.29
HCN3-204ENST00000496230 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.21□□□□□ -0.29
HCN3-204ENST00000496230 ZNF541Q9H0D2 1346 aa13.2□□□□□ -0.3
HCN3-204ENST00000496230 FAM13AO94988 1023 aa13.2□□□□□ -0.3
HCN3-204ENST00000496230 ITGB5P18084 799 aa13.2□□□□□ -0.3
HCN3-204ENST00000496230 EEF1GP26641 437 aaKnown RBP13.2□□□□□ -0.3
HCN3-204ENST00000496230 USP11P51784 963 aa13.2□□□□□ -0.3
HCN3-204ENST00000496230 ZNF668Q96K58 619 aaPredicted RBP13.2□□□□□ -0.3
HCN3-204ENST00000496230 GGA3Q9NZ52 723 aa13.2□□□□□ -0.3
HCN3-204ENST00000496230 REXO2Q9Y3B8 237 aaKnown RBP13.2□□□□□ -0.3
HCN3-204ENST00000496230 ATP9AO75110 1047 aa13.2□□□□□ -0.3
HCN3-204ENST00000496230 SLC9A1P19634 815 aa13.2□□□□□ -0.3
HCN3-204ENST00000496230 EIF4A3P38919 411 aaKnown RBP13.2□□□□□ -0.3
HCN3-204ENST00000496230 RPS6P62753 249 aaKnown RBP13.2□□□□□ -0.3
HCN3-204ENST00000496230 GIT2Q14161 759 aa13.2□□□□□ -0.3
HCN3-204ENST00000496230 PLA2G4FQ68DD2 849 aa13.2□□□□□ -0.3
HCN3-204ENST00000496230 PROCA1Q8NCQ7 364 aaPredicted RBP13.2□□□□□ -0.3
HCN3-204ENST00000496230 ERMNQ8TAM6 284 aa13.2□□□□□ -0.3
HCN3-204ENST00000496230 NT5C3AQ9H0P0 336 aa13.2□□□□□ -0.3
HCN3-204ENST00000496230 UNC45AQ9H3U1 944 aa13.2□□□□□ -0.3
HCN3-204ENST00000496230 SEPT11Q9NVA2 429 aaKnown RBP13.2□□□□□ -0.3
HCN3-204ENST00000496230 MAST2Q6P0Q8 1798 aa13.2□□□□□ -0.3
HCN3-204ENST00000496230 LRRC10BA6NIK2 292 aa13.2□□□□□ -0.3
HCN3-204ENST00000496230 hCG_1984214I3L0E3 225 aa13.2□□□□□ -0.3
HCN3-204ENST00000496230 CTIFO43310 598 aaKnown RBP13.2□□□□□ -0.3
HCN3-204ENST00000496230 SLITRK3O94933 977 aa13.2□□□□□ -0.3
HCN3-204ENST00000496230 TTLL12Q14166 644 aaPredicted RBP13.2□□□□□ -0.3
HCN3-204ENST00000496230 CEP55Q53EZ4 464 aa13.2□□□□□ -0.3
HCN3-204ENST00000496230 ODR4Q5SWX8 454 aa13.2□□□□□ -0.3
HCN3-204ENST00000496230 HAUS3Q68CZ6 603 aa13.2□□□□□ -0.3
HCN3-204ENST00000496230 CENPPQ6IPU0 288 aa13.2□□□□□ -0.3
HCN3-204ENST00000496230 TMTC1Q8IUR5 882 aa13.2□□□□□ -0.3
HCN3-204ENST00000496230 SYCP3Q8IZU3 236 aa13.2□□□□□ -0.3
HCN3-204ENST00000496230 ZNF713Q8N859 430 aaPredicted RBP13.2□□□□□ -0.3
HCN3-204ENST00000496230 FAM133AQ8N9E0 248 aa13.2□□□□□ -0.3
HCN3-204ENST00000496230 ZNF507Q8TCN5 953 aa13.2□□□□□ -0.3
HCN3-204ENST00000496230 SECISBP2LQ93073 1101 aaKnown RBP13.2□□□□□ -0.3
HCN3-204ENST00000496230 PSMD1Q99460 953 aa13.2□□□□□ -0.3
HCN3-204ENST00000496230 SUGCTQ9HAC7 445 aa13.2□□□□□ -0.3
HCN3-204ENST00000496230 LAMA2P24043 3122 aaKnown RBP13.19□□□□□ -0.3
HCN3-204ENST00000496230 GOLGA8IPA6NC78 632 aa13.19□□□□□ -0.3
HCN3-204ENST00000496230 GOLGA8JA6NMD2 632 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms