RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 TSGA10Q9BZW7 698 aa16.36■□□□□ 0.21
CHTOP-206ENST00000495554 PCDHA2Q9Y5H9 948 aa16.36■□□□□ 0.21
CHTOP-206ENST00000495554 STK24Q9Y6E0 443 aa16.36■□□□□ 0.21
CHTOP-206ENST00000495554 PITPNM2Q9BZ72 1349 aa16.36■□□□□ 0.21
CHTOP-206ENST00000495554 KIF13BQ9NQT8 1826 aa16.36■□□□□ 0.21
CHTOP-206ENST00000495554 MED24O75448 989 aa16.35■□□□□ 0.21
CHTOP-206ENST00000495554 GNA14O95837 355 aa16.35■□□□□ 0.21
CHTOP-206ENST00000495554 PLA2G4AP47712 749 aa16.35■□□□□ 0.21
CHTOP-206ENST00000495554 VAV2P52735 878 aa16.35■□□□□ 0.21
CHTOP-206ENST00000495554 SETQ01105 290 aaPredicted RBP16.35■□□□□ 0.21
CHTOP-206ENST00000495554 SPIRE1Q08AE8 756 aa16.35■□□□□ 0.21
CHTOP-206ENST00000495554 KIF5AQ12840 1032 aa16.35■□□□□ 0.21
CHTOP-206ENST00000495554 NBPF9Q3BBW0 867 aa16.35■□□□□ 0.21
CHTOP-206ENST00000495554 HERC4Q5GLZ8 1057 aaPredicted RBP16.35■□□□□ 0.21
CHTOP-206ENST00000495554 ARHGAP27Q6ZUM4 889 aa16.35■□□□□ 0.21
CHTOP-206ENST00000495554 HNRNPLLQ8WVV9 542 aaKnown RBP16.35■□□□□ 0.21
CHTOP-206ENST00000495554 LENG9Q96B70 501 aa16.35■□□□□ 0.21
CHTOP-206ENST00000495554 FAM20AQ96MK3 541 aa16.35■□□□□ 0.21
CHTOP-206ENST00000495554 LACRTQ9GZZ8 138 aa16.35■□□□□ 0.21
CHTOP-206ENST00000495554 RAB21Q9UL25 225 aa16.35■□□□□ 0.21
CHTOP-206ENST00000495554 SHTN1A0MZ66 631 aa16.35■□□□□ 0.21
CHTOP-206ENST00000495554 EPHB6O15197 1021 aa16.35■□□□□ 0.21
CHTOP-206ENST00000495554 STAT3P40763 770 aa16.35■□□□□ 0.21
CHTOP-206ENST00000495554 SLC12A3P55017 1021 aa16.35■□□□□ 0.21
CHTOP-206ENST00000495554 PAPD7Q5XG87 772 aaKnown RBP16.35■□□□□ 0.21
CHTOP-206ENST00000495554 PIM2Q9P1W9 311 aa16.35■□□□□ 0.21
CHTOP-206ENST00000495554 TFR2Q9UP52 801 aa16.35■□□□□ 0.21
CHTOP-206ENST00000495554 FRMD3A2A2Y4 597 aa16.34■□□□□ 0.21
CHTOP-206ENST00000495554 RCCD1A6NED2 376 aa16.34■□□□□ 0.21
CHTOP-206ENST00000495554 WNT10BO00744 389 aa16.34■□□□□ 0.21
CHTOP-206ENST00000495554 TUBBP07437 444 aa16.34■□□□□ 0.21
CHTOP-206ENST00000495554 FAM83AQ86UY5 434 aa16.34■□□□□ 0.21
CHTOP-206ENST00000495554 CATSPER3Q86XQ3 398 aa16.34■□□□□ 0.21
CHTOP-206ENST00000495554 PURBQ96QR8 312 aaKnown RBP16.34■□□□□ 0.21
CHTOP-206ENST00000495554 TANGO6Q9C0B7 1094 aa16.34■□□□□ 0.21
CHTOP-206ENST00000495554 ARHGEF10LQ9HCE6 1279 aa16.34■□□□□ 0.21
CHTOP-206ENST00000495554 ARHGAP20Q9P2F6 1191 aa16.34■□□□□ 0.21
CHTOP-206ENST00000495554 SAR1BQ9Y6B6 198 aa16.34■□□□□ 0.21
CHTOP-206ENST00000495554 TFRCP02786 760 aaKnown RBP16.34■□□□□ 0.21
CHTOP-206ENST00000495554 KRT18P05783 430 aaKnown RBP16.34■□□□□ 0.21
CHTOP-206ENST00000495554 RPA1P27694 616 aa16.34■□□□□ 0.21
CHTOP-206ENST00000495554 CIITAP33076 1130 aa16.34■□□□□ 0.21
CHTOP-206ENST00000495554 CYP27A1Q02318 531 aa16.34■□□□□ 0.21
CHTOP-206ENST00000495554 MAP3K10Q02779 954 aa16.34■□□□□ 0.21
CHTOP-206ENST00000495554 CCDC40Q4G0X9 1142 aa16.34■□□□□ 0.21
CHTOP-206ENST00000495554 FAM83BQ5T0W9 1011 aa16.34■□□□□ 0.21
CHTOP-206ENST00000495554 NEK11Q8NG66 645 aa16.34■□□□□ 0.21
CHTOP-206ENST00000495554 TBC1D7Q9P0N9 293 aa16.34■□□□□ 0.21
CHTOP-206ENST00000495554 ANO9A1A5B4 782 aa16.33■□□□□ 0.21
CHTOP-206ENST00000495554 POTEFA5A3E0 1075 aa16.33■□□□□ 0.21
CHTOP-206ENST00000495554 FAM86B1E9PN63 330 aa16.33■□□□□ 0.21
CHTOP-206ENST00000495554 ENC1O14682 589 aa16.33■□□□□ 0.21
CHTOP-206ENST00000495554 FAM86B2P0C5J1 330 aa16.33■□□□□ 0.21
CHTOP-206ENST00000495554 POTEIP0CG38 1075 aa16.33■□□□□ 0.21
CHTOP-206ENST00000495554 HOXA13P31271 388 aaPredicted RBP16.33■□□□□ 0.21
CHTOP-206ENST00000495554 STAT2P52630 851 aa16.33■□□□□ 0.21
CHTOP-206ENST00000495554 MARSP56192 900 aaKnown RBP16.33■□□□□ 0.21
CHTOP-206ENST00000495554 TGFB2P61812 414 aa16.33■□□□□ 0.21
CHTOP-206ENST00000495554 TERF2Q15554 542 aa16.33■□□□□ 0.21
CHTOP-206ENST00000495554 POTEGQ6S5H5 508 aa16.33■□□□□ 0.21
CHTOP-206ENST00000495554 POTEEQ6S8J3 1075 aa16.33■□□□□ 0.21
CHTOP-206ENST00000495554 TBC1D5Q92609 795 aa16.33■□□□□ 0.21
CHTOP-206ENST00000495554 EMILIN3Q9NT22 766 aa16.33■□□□□ 0.21
CHTOP-206ENST00000495554 DNM3Q9UQ16 869 aa16.33■□□□□ 0.21
CHTOP-206ENST00000495554 USO1O60763 962 aaKnown RBP16.33■□□□□ 0.2
CHTOP-206ENST00000495554 SASH3O75995 380 aa16.33■□□□□ 0.2
CHTOP-206ENST00000495554 ZBTB7AO95365 584 aa16.33■□□□□ 0.2
CHTOP-206ENST00000495554 LCA5LO95447 670 aa16.33■□□□□ 0.2
CHTOP-206ENST00000495554 ATP1A1P05023 1023 aaKnown RBP16.33■□□□□ 0.2
CHTOP-206ENST00000495554 PLEKP08567 350 aaPredicted RBP16.33■□□□□ 0.2
CHTOP-206ENST00000495554 CAP2P40123 477 aa16.33■□□□□ 0.2
CHTOP-206ENST00000495554 TRAF1Q13077 416 aa16.33■□□□□ 0.2
CHTOP-206ENST00000495554 LONRF2Q1L5Z9 754 aa16.33■□□□□ 0.2
CHTOP-206ENST00000495554 ARSHQ5FYA8 562 aa16.33■□□□□ 0.2
CHTOP-206ENST00000495554 NCAPH2Q6IBW4 605 aa16.33■□□□□ 0.2
CHTOP-206ENST00000495554 PPP4R3CPQ6ZMV5 832 aa16.33■□□□□ 0.2
CHTOP-206ENST00000495554 RRAGAQ7L523 313 aa16.33■□□□□ 0.2
CHTOP-206ENST00000495554 SCFD1Q8WVM8 642 aa16.33■□□□□ 0.2
CHTOP-206ENST00000495554 BAP1Q92560 729 aa16.33■□□□□ 0.2
CHTOP-206ENST00000495554 FUT8Q9BYC5 575 aa16.33■□□□□ 0.2
CHTOP-206ENST00000495554 FGFBP2Q9BYJ0 223 aa16.33■□□□□ 0.2
CHTOP-206ENST00000495554 GLIS2Q9BZE0 524 aaPredicted RBP16.33■□□□□ 0.2
CHTOP-206ENST00000495554 SCAF8Q9UPN6 1271 aaKnown RBP16.33■□□□□ 0.2
CHTOP-206ENST00000495554 NPHP3-ACAD11A0A0J9YXS1 232 aa16.33■□□□□ 0.2
CHTOP-206ENST00000495554 LRRC53A6NM62 1247 aa16.33■□□□□ 0.2
CHTOP-206ENST00000495554 PIK3CDO00329 1044 aa16.33■□□□□ 0.2
CHTOP-206ENST00000495554 ZNF263O14978 683 aa16.33■□□□□ 0.2
CHTOP-206ENST00000495554 ERLIN1O75477 346 aa16.33■□□□□ 0.2
CHTOP-206ENST00000495554 KIF11P52732 1056 aa16.33■□□□□ 0.2
CHTOP-206ENST00000495554 CACNA2D4Q7Z3S7 1137 aa16.33■□□□□ 0.2
CHTOP-206ENST00000495554 IFIH1Q9BYX4 1025 aaKnown RBP16.33■□□□□ 0.2
CHTOP-206ENST00000495554 KCTD10Q9H3F6 313 aa16.33■□□□□ 0.2
CHTOP-206ENST00000495554 DEF6Q9H4E7 631 aa16.33■□□□□ 0.2
CHTOP-206ENST00000495554 ERCC3P19447 782 aa16.32■□□□□ 0.2
CHTOP-206ENST00000495554 CACNB1Q02641 598 aaPredicted RBP16.32■□□□□ 0.2
CHTOP-206ENST00000495554 EDRF1Q3B7T1 1238 aa16.32■□□□□ 0.2
CHTOP-206ENST00000495554 NELFCDQ8IXH7 590 aa16.32■□□□□ 0.2
CHTOP-206ENST00000495554 SYT2Q8N9I0 419 aaPredicted RBP16.32■□□□□ 0.2
CHTOP-206ENST00000495554 CYP2W1Q8TAV3 490 aa16.32■□□□□ 0.2
CHTOP-206ENST00000495554 PNKPQ96T60 521 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms